Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120862.seq
(632 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
S73225-1|AAB30811.1| 327|Tribolium castaneum protein ( Triboliu... 27 0.098
EF633444-1|ABR32189.1| 721|Tribolium castaneum heat shock prote... 24 0.92
AY043293-2|AAK96034.1| 353|Tribolium castaneum homeodomain tran... 23 1.6
AF231104-1|AAF64149.1| 142|Tribolium castaneum labial protein p... 23 1.6
AF231103-1|AAF64148.1| 142|Tribolium castaneum labial protein p... 23 1.6
X97819-1|CAA66399.1| 251|Tribolium castaneum ZEN Tc protein. 22 3.7
AF321227-4|AAK16424.1| 246|Tribolium castaneum Zen protein. 22 3.7
X06905-1|CAA30009.1| 489|Tribolium castaneum protein ( Triboliu... 21 8.6
U04271-1|AAA03708.1| 490|Tribolium castaneum alpha-amylase I pr... 21 8.6
AM295015-1|CAL25730.1| 549|Tribolium castaneum ecdysone recepto... 21 8.6
>S73225-1|AAB30811.1| 327|Tribolium castaneum protein ( Tribolium
castaneum homeodomainprotein mRNA, complete cds. ).
Length = 327
Score = 27.5 bits (58), Expect = 0.098
Identities = 17/58 (29%), Positives = 29/58 (50%)
Frame = +1
Query: 46 NTPPPPLRYPSNPATAIFTNAQTYNNAPGYVPPTTRDNKMDTSRSNSTNSVAIAPYNK 219
+T P + PS+P I + + T + +PG++ T D +D R +ST YN+
Sbjct: 58 STLDPGRKSPSSPR--ISSPSSTKSGSPGFLTYTKADRDVDLFRGSSTPESPEHYYNQ 113
>EF633444-1|ABR32189.1| 721|Tribolium castaneum heat shock protein
90 protein.
Length = 721
Score = 24.2 bits (50), Expect = 0.92
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = -2
Query: 559 KFLRVRRQRI*HKRCLKIFESLGRD 485
K L+V R+ + K+CL++FE L D
Sbjct: 396 KILKVIRKNL-VKKCLELFEELAED 419
>AY043293-2|AAK96034.1| 353|Tribolium castaneum homeodomain
transcription factor Labialprotein.
Length = 353
Score = 23.4 bits (48), Expect = 1.6
Identities = 11/33 (33%), Positives = 15/33 (45%)
Frame = +1
Query: 130 GYVPPTTRDNKMDTSRSNSTNSVAIAPYNKSKE 228
G +PP + TS SNS +S + S E
Sbjct: 315 GLIPPEPISASLSTSNSNSPSSTNLIQNEASNE 347
>AF231104-1|AAF64149.1| 142|Tribolium castaneum labial protein
protein.
Length = 142
Score = 23.4 bits (48), Expect = 1.6
Identities = 11/33 (33%), Positives = 15/33 (45%)
Frame = +1
Query: 130 GYVPPTTRDNKMDTSRSNSTNSVAIAPYNKSKE 228
G +PP + TS SNS +S + S E
Sbjct: 104 GLIPPEPISASLSTSNSNSPSSTNLIQNEASNE 136
>AF231103-1|AAF64148.1| 142|Tribolium castaneum labial protein
protein.
Length = 142
Score = 23.4 bits (48), Expect = 1.6
Identities = 11/33 (33%), Positives = 15/33 (45%)
Frame = +1
Query: 130 GYVPPTTRDNKMDTSRSNSTNSVAIAPYNKSKE 228
G +PP + TS SNS +S + S E
Sbjct: 104 GLIPPEPISASLSTSNSNSPSSTNLIQNEASNE 136
>X97819-1|CAA66399.1| 251|Tribolium castaneum ZEN Tc protein.
Length = 251
Score = 22.2 bits (45), Expect = 3.7
Identities = 14/52 (26%), Positives = 21/52 (40%), Gaps = 2/52 (3%)
Frame = +1
Query: 40 YY--NTPPPPLRYPSNPATAIFTNAQTYNNAPGYVPPTTRDNKMDTSRSNST 189
YY N PP+ YP + NA Y ++ +P T + R+ T
Sbjct: 35 YYENNQALPPITYPPSDWNCPQYNAPPYMSSVLQLPTVTEIQETQPQRTKPT 86
>AF321227-4|AAK16424.1| 246|Tribolium castaneum Zen protein.
Length = 246
Score = 22.2 bits (45), Expect = 3.7
Identities = 14/52 (26%), Positives = 21/52 (40%), Gaps = 2/52 (3%)
Frame = +1
Query: 40 YY--NTPPPPLRYPSNPATAIFTNAQTYNNAPGYVPPTTRDNKMDTSRSNST 189
YY N PP+ YP + NA Y ++ +P T + R+ T
Sbjct: 26 YYENNQALPPITYPPSDWNCPQYNAPPYMSSVLQLPTVTEIQETQPQRTKPT 77
>X06905-1|CAA30009.1| 489|Tribolium castaneum protein ( Tribolium
castaneum mRNAfor alhpa amylase 3'region. ).
Length = 489
Score = 21.0 bits (42), Expect = 8.6
Identities = 13/36 (36%), Positives = 16/36 (44%)
Frame = -2
Query: 508 IFESLGRDSAALPCPNSFCNRIRWRIMVSSDSNRFT 401
I + D AAL S CN + RI V + N T
Sbjct: 84 ILNTRSGDEAALADMISRCNAVGVRIYVDTVINHMT 119
>U04271-1|AAA03708.1| 490|Tribolium castaneum alpha-amylase I
protein.
Length = 490
Score = 21.0 bits (42), Expect = 8.6
Identities = 13/36 (36%), Positives = 16/36 (44%)
Frame = -2
Query: 508 IFESLGRDSAALPCPNSFCNRIRWRIMVSSDSNRFT 401
I + D AAL S CN + RI V + N T
Sbjct: 85 ILNTRSGDEAALADMISRCNAVGVRIYVDTVINHMT 120
>AM295015-1|CAL25730.1| 549|Tribolium castaneum ecdysone receptor
(isoform A) protein.
Length = 549
Score = 21.0 bits (42), Expect = 8.6
Identities = 7/11 (63%), Positives = 8/11 (72%)
Frame = -3
Query: 495 SAGTRPRCLVP 463
S G RP C+VP
Sbjct: 250 SVGMRPECVVP 260
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 141,692
Number of Sequences: 336
Number of extensions: 3100
Number of successful extensions: 12
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16292796
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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