Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120860.seq
(628 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR450300-1|CAG29296.1| 374|Homo sapiens GA17 protein. 73 8e-13
BC051292-1|AAH51292.1| 374|Homo sapiens eukaryotic translation ... 73 8e-13
BC019103-1|AAH19103.1| 374|Homo sapiens PCI domain containing 1... 73 8e-13
AY769947-1|AAX12524.1| 374|Homo sapiens fetal lung protein B5 p... 73 8e-13
AK222564-1|BAD96284.1| 374|Homo sapiens dendritic cell protein ... 73 8e-13
AF064603-1|AAC17108.1| 374|Homo sapiens GA17 protein protein. 73 1e-12
DQ185042-1|ABD14422.1| 136|Homo sapiens dendritic cell protein ... 72 1e-12
AF110377-1|AAD04629.1| 3859|Homo sapiens PCAF-associated factor ... 30 5.8
AF076974-1|AAD09420.1| 3830|Homo sapiens TRRAP protein protein. 30 5.8
AC004991-1|AAC27675.2| 2089|Homo sapiens unknown protein. 30 5.8
AB209489-1|BAD92726.1| 3587|Homo sapiens Transformation/transcri... 30 5.8
>CR450300-1|CAG29296.1| 374|Homo sapiens GA17 protein.
Length = 374
Score = 72.9 bits (171), Expect = 8e-13
Identities = 41/81 (50%), Positives = 49/81 (60%)
Frame = +3
Query: 81 MQGPAVFMDISLEDQALELRRYFKSLGAEISEEKSPKGIEDDLHKIVGVCDACFKEPSNR 260
M PA F+DIS EDQA ELR Y KS GAEISEE S G+ DL +I+ CD C KE
Sbjct: 1 MSVPA-FIDISEEDQAAELRAYLKSKGAEISEENSEGGLHVDLAQIIEACDVCLKEDDKD 59
Query: 261 ISKPF*TVLSLLWFLYH*KEE 323
+ +V+SLL L K+E
Sbjct: 60 VESVMNSVVSLLLILEPDKQE 80
Score = 68.9 bits (161), Expect = 1e-11
Identities = 38/123 (30%), Positives = 71/123 (57%)
Frame = +2
Query: 260 DIEAILNSIVSIMVSIPLERGENLILAFSQRLTKAPGPKLGMVALQSLWRLYNNLEPNSP 439
D+E+++NS+VS+++ + ++ E LI + ++L K + + LQ L L++ ++ N+P
Sbjct: 59 DVESVMNSVVSLLLILEPDKQEALIESLCEKLVKFREGERPSLRLQLLSNLFHGMDKNTP 118
Query: 440 LRYHVYYHVIELAARVGFVREVFLELSSLGKSLLTAHLLMNKWQKLYRLLHQVLKDQNSE 619
+RY VY +I++AA G ++ + EL + K + +L K L RLL++ L D
Sbjct: 119 VRYTVYCSLIKVAASCGAIQYIPTELDQVRKWISDWNLTTEKKHTLLRLLYEALVDCKKS 178
Query: 620 LAA 628
AA
Sbjct: 179 DAA 181
>BC051292-1|AAH51292.1| 374|Homo sapiens eukaryotic translation
initiation factor 3, subunit M protein.
Length = 374
Score = 72.9 bits (171), Expect = 8e-13
Identities = 41/81 (50%), Positives = 49/81 (60%)
Frame = +3
Query: 81 MQGPAVFMDISLEDQALELRRYFKSLGAEISEEKSPKGIEDDLHKIVGVCDACFKEPSNR 260
M PA F+DIS EDQA ELR Y KS GAEISEE S G+ DL +I+ CD C KE
Sbjct: 1 MSVPA-FIDISEEDQAAELRAYLKSKGAEISEENSEGGLHVDLAQIIEACDVCLKEDDKD 59
Query: 261 ISKPF*TVLSLLWFLYH*KEE 323
+ +V+SLL L K+E
Sbjct: 60 VESVMNSVVSLLLILEPDKQE 80
Score = 68.9 bits (161), Expect = 1e-11
Identities = 38/123 (30%), Positives = 71/123 (57%)
Frame = +2
Query: 260 DIEAILNSIVSIMVSIPLERGENLILAFSQRLTKAPGPKLGMVALQSLWRLYNNLEPNSP 439
D+E+++NS+VS+++ + ++ E LI + ++L K + + LQ L L++ ++ N+P
Sbjct: 59 DVESVMNSVVSLLLILEPDKQEALIESLCEKLVKFREGERPSLRLQLLSNLFHGMDKNTP 118
Query: 440 LRYHVYYHVIELAARVGFVREVFLELSSLGKSLLTAHLLMNKWQKLYRLLHQVLKDQNSE 619
+RY VY +I++AA G ++ + EL + K + +L K L RLL++ L D
Sbjct: 119 VRYTVYCSLIKVAASCGAIQYIPTELDQVRKWISDWNLTTEKKHTLLRLLYEALVDCKKS 178
Query: 620 LAA 628
AA
Sbjct: 179 DAA 181
>BC019103-1|AAH19103.1| 374|Homo sapiens PCI domain containing 1
(herpesvirus entry mediator) protein.
Length = 374
Score = 72.9 bits (171), Expect = 8e-13
Identities = 41/81 (50%), Positives = 49/81 (60%)
Frame = +3
Query: 81 MQGPAVFMDISLEDQALELRRYFKSLGAEISEEKSPKGIEDDLHKIVGVCDACFKEPSNR 260
M PA F+DIS EDQA ELR Y KS GAEISEE S G+ DL +I+ CD C KE
Sbjct: 1 MSVPA-FIDISEEDQAAELRAYLKSKGAEISEENSEGGLHVDLAQIIEACDVCLKEDDKD 59
Query: 261 ISKPF*TVLSLLWFLYH*KEE 323
+ +V+SLL L K+E
Sbjct: 60 VESVMNSVVSLLLILEPDKQE 80
Score = 68.9 bits (161), Expect = 1e-11
Identities = 38/123 (30%), Positives = 71/123 (57%)
Frame = +2
Query: 260 DIEAILNSIVSIMVSIPLERGENLILAFSQRLTKAPGPKLGMVALQSLWRLYNNLEPNSP 439
D+E+++NS+VS+++ + ++ E LI + ++L K + + LQ L L++ ++ N+P
Sbjct: 59 DVESVMNSVVSLLLILEPDKQEALIESLCEKLVKFREGERPSLRLQLLSNLFHGMDKNTP 118
Query: 440 LRYHVYYHVIELAARVGFVREVFLELSSLGKSLLTAHLLMNKWQKLYRLLHQVLKDQNSE 619
+RY VY +I++AA G ++ + EL + K + +L K L RLL++ L D
Sbjct: 119 VRYTVYCSLIKVAASCGAIQYIPTELDQVRKWISDWNLTTEKKHTLLRLLYEALVDCKKS 178
Query: 620 LAA 628
AA
Sbjct: 179 DAA 181
>AY769947-1|AAX12524.1| 374|Homo sapiens fetal lung protein B5
protein.
Length = 374
Score = 72.9 bits (171), Expect = 8e-13
Identities = 41/81 (50%), Positives = 49/81 (60%)
Frame = +3
Query: 81 MQGPAVFMDISLEDQALELRRYFKSLGAEISEEKSPKGIEDDLHKIVGVCDACFKEPSNR 260
M PA F+DIS EDQA ELR Y KS GAEISEE S G+ DL +I+ CD C KE
Sbjct: 1 MSVPA-FIDISEEDQAAELRAYLKSKGAEISEENSEGGLHVDLAQIIEACDVCLKEDDKD 59
Query: 261 ISKPF*TVLSLLWFLYH*KEE 323
+ +V+SLL L K+E
Sbjct: 60 VESVMNSVVSLLLILEPDKQE 80
Score = 68.9 bits (161), Expect = 1e-11
Identities = 38/123 (30%), Positives = 71/123 (57%)
Frame = +2
Query: 260 DIEAILNSIVSIMVSIPLERGENLILAFSQRLTKAPGPKLGMVALQSLWRLYNNLEPNSP 439
D+E+++NS+VS+++ + ++ E LI + ++L K + + LQ L L++ ++ N+P
Sbjct: 59 DVESVMNSVVSLLLILEPDKQEALIESLCEKLVKFREGERPSLRLQLLSNLFHGMDKNTP 118
Query: 440 LRYHVYYHVIELAARVGFVREVFLELSSLGKSLLTAHLLMNKWQKLYRLLHQVLKDQNSE 619
+RY VY +I++AA G ++ + EL + K + +L K L RLL++ L D
Sbjct: 119 VRYTVYCSLIKVAASCGAIQYIPTELDQVRKWISDWNLTTEKKHTLLRLLYEALVDCKKS 178
Query: 620 LAA 628
AA
Sbjct: 179 DAA 181
>AK222564-1|BAD96284.1| 374|Homo sapiens dendritic cell protein
variant protein.
Length = 374
Score = 72.9 bits (171), Expect = 8e-13
Identities = 41/81 (50%), Positives = 49/81 (60%)
Frame = +3
Query: 81 MQGPAVFMDISLEDQALELRRYFKSLGAEISEEKSPKGIEDDLHKIVGVCDACFKEPSNR 260
M PA F+DIS EDQA ELR Y KS GAEISEE S G+ DL +I+ CD C KE
Sbjct: 1 MSVPA-FIDISEEDQAAELRAYLKSKGAEISEENSEGGLHVDLAQIIEACDVCLKEDDKD 59
Query: 261 ISKPF*TVLSLLWFLYH*KEE 323
+ +V+SLL L K+E
Sbjct: 60 VESVMNSVVSLLLILEPDKQE 80
Score = 68.9 bits (161), Expect = 1e-11
Identities = 38/123 (30%), Positives = 71/123 (57%)
Frame = +2
Query: 260 DIEAILNSIVSIMVSIPLERGENLILAFSQRLTKAPGPKLGMVALQSLWRLYNNLEPNSP 439
D+E+++NS+VS+++ + ++ E LI + ++L K + + LQ L L++ ++ N+P
Sbjct: 59 DVESVMNSVVSLLLILEPDKQEALIESLCEKLVKFREGERPSLRLQLLSNLFHGMDKNTP 118
Query: 440 LRYHVYYHVIELAARVGFVREVFLELSSLGKSLLTAHLLMNKWQKLYRLLHQVLKDQNSE 619
+RY VY +I++AA G ++ + EL + K + +L K L RLL++ L D
Sbjct: 119 VRYTVYCSLIKVAASCGAIQYIPTELDQVRKWISDWNLTTEKKHTLLRLLYEALVDCKKS 178
Query: 620 LAA 628
AA
Sbjct: 179 DAA 181
>AF064603-1|AAC17108.1| 374|Homo sapiens GA17 protein protein.
Length = 374
Score = 72.5 bits (170), Expect = 1e-12
Identities = 41/81 (50%), Positives = 49/81 (60%)
Frame = +3
Query: 81 MQGPAVFMDISLEDQALELRRYFKSLGAEISEEKSPKGIEDDLHKIVGVCDACFKEPSNR 260
M PA F+DIS EDQA ELR Y KS GAEISEE S G+ DL +I+ CD C KE
Sbjct: 1 MSVPA-FIDISEEDQAAELRAYLKSKGAEISEENSEGGLHVDLAQIIEACDVCLKEDDKD 59
Query: 261 ISKPF*TVLSLLWFLYH*KEE 323
+ +V+SLL L K+E
Sbjct: 60 VESVVNSVVSLLLILEPDKQE 80
Score = 68.9 bits (161), Expect = 1e-11
Identities = 38/123 (30%), Positives = 70/123 (56%)
Frame = +2
Query: 260 DIEAILNSIVSIMVSIPLERGENLILAFSQRLTKAPGPKLGMVALQSLWRLYNNLEPNSP 439
D+E+++NS+VS+++ + ++ E LI + ++L K + + LQ L L++ ++ N+P
Sbjct: 59 DVESVVNSVVSLLLILEPDKQEALIESLCEKLVKFREGERPSLRLQLLSNLFHGMDKNTP 118
Query: 440 LRYHVYYHVIELAARVGFVREVFLELSSLGKSLLTAHLLMNKWQKLYRLLHQVLKDQNSE 619
+RY VY +IE+ A G ++ + EL + K + +L K L RLL++ L D
Sbjct: 119 VRYTVYCSLIEVVASCGAIQYIPTELDQVRKWISDWNLTTEKKHTLLRLLYEALADCKKS 178
Query: 620 LAA 628
AA
Sbjct: 179 DAA 181
>DQ185042-1|ABD14422.1| 136|Homo sapiens dendritic cell protein
GA17 protein.
Length = 136
Score = 72.1 bits (169), Expect = 1e-12
Identities = 38/75 (50%), Positives = 46/75 (61%)
Frame = +3
Query: 99 FMDISLEDQALELRRYFKSLGAEISEEKSPKGIEDDLHKIVGVCDACFKEPSNRISKPF* 278
F+DIS EDQA ELR Y KS GAEISEE S G+ DL +I+ CD C KE +
Sbjct: 3 FIDISEEDQAAELRAYLKSKGAEISEENSEGGLHVDLAQIIEACDVCLKEDDKDVESVMN 62
Query: 279 TVLSLLWFLYH*KEE 323
+V+SLL L K+E
Sbjct: 63 SVVSLLLILEPDKQE 77
Score = 51.2 bits (117), Expect = 3e-06
Identities = 24/80 (30%), Positives = 51/80 (63%)
Frame = +2
Query: 260 DIEAILNSIVSIMVSIPLERGENLILAFSQRLTKAPGPKLGMVALQSLWRLYNNLEPNSP 439
D+E+++NS+VS+++ + ++ E LI + ++L K + + LQ L L++ ++ N+P
Sbjct: 56 DVESVMNSVVSLLLILEPDKQEALIESLCEKLVKFREGERPSLRLQLLSNLFHGMDKNTP 115
Query: 440 LRYHVYYHVIELAARVGFVR 499
+R VY +I++AA G ++
Sbjct: 116 VRCTVYCSLIKVAASCGAIQ 135
>AF110377-1|AAD04629.1| 3859|Homo sapiens PCAF-associated factor 400
protein.
Length = 3859
Score = 30.3 bits (65), Expect = 5.8
Identities = 20/101 (19%), Positives = 49/101 (48%), Gaps = 3/101 (2%)
Frame = +2
Query: 245 RAE*SDIEAILNSIVSIMV-SIP--LERGENLILAFSQRLTKAPGPKLGMVALQSLWRLY 415
+A + AI+ ++I+ ++P +E G ++ +++++ G + + + L +
Sbjct: 1910 KAHAMEARAIVRQAMAILTPAVPARMEDGHQMLTHWTRKIIVEEGHTVPQL-VHILHLIV 1968
Query: 416 NNLEPNSPLRYHVYYHVIELAARVGFVREVFLELSSLGKSL 538
+ + P+R+H+ H++ R+GF V +E L L
Sbjct: 1969 QHFKVYYPVRHHLVQHMVSAMQRLGFTPSVTIEQRRLAVDL 2009
>AF076974-1|AAD09420.1| 3830|Homo sapiens TRRAP protein protein.
Length = 3830
Score = 30.3 bits (65), Expect = 5.8
Identities = 20/101 (19%), Positives = 49/101 (48%), Gaps = 3/101 (2%)
Frame = +2
Query: 245 RAE*SDIEAILNSIVSIMV-SIP--LERGENLILAFSQRLTKAPGPKLGMVALQSLWRLY 415
+A + AI+ ++I+ ++P +E G ++ +++++ G + + + L +
Sbjct: 1892 KAHAMEARAIVRQAMAILTPAVPARMEDGHQMLTHWTRKIIVEEGHTVPQL-VHILHLIV 1950
Query: 416 NNLEPNSPLRYHVYYHVIELAARVGFVREVFLELSSLGKSL 538
+ + P+R+H+ H++ R+GF V +E L L
Sbjct: 1951 QHFKVYYPVRHHLVQHMVSAMQRLGFTPSVTIEQRRLAVDL 1991
>AC004991-1|AAC27675.2| 2089|Homo sapiens unknown protein.
Length = 2089
Score = 30.3 bits (65), Expect = 5.8
Identities = 20/101 (19%), Positives = 49/101 (48%), Gaps = 3/101 (2%)
Frame = +2
Query: 245 RAE*SDIEAILNSIVSIMV-SIP--LERGENLILAFSQRLTKAPGPKLGMVALQSLWRLY 415
+A + AI+ ++I+ ++P +E G ++ +++++ G + + + L +
Sbjct: 1892 KAHAMEARAIVRQAMAILTPAVPARMEDGHQMLTHWTRKIIVEEGHTVPQL-VHILHLIV 1950
Query: 416 NNLEPNSPLRYHVYYHVIELAARVGFVREVFLELSSLGKSL 538
+ + P+R+H+ H++ R+GF V +E L L
Sbjct: 1951 QHFKVYYPVRHHLVQHMVSAMQRLGFTPSVTIEQRRLAVDL 1991
>AB209489-1|BAD92726.1| 3587|Homo sapiens Transformation/transcription
domain-associated protein variant protein.
Length = 3587
Score = 30.3 bits (65), Expect = 5.8
Identities = 20/101 (19%), Positives = 49/101 (48%), Gaps = 3/101 (2%)
Frame = +2
Query: 245 RAE*SDIEAILNSIVSIMV-SIP--LERGENLILAFSQRLTKAPGPKLGMVALQSLWRLY 415
+A + AI+ ++I+ ++P +E G ++ +++++ G + + + L +
Sbjct: 1631 KAHAMEARAIVRQAMAILTPAVPARMEDGHQMLTHWTRKIIVEEGHTVPQL-VHILHLIV 1689
Query: 416 NNLEPNSPLRYHVYYHVIELAARVGFVREVFLELSSLGKSL 538
+ + P+R+H+ H++ R+GF V +E L L
Sbjct: 1690 QHFKVYYPVRHHLVQHMVSAMQRLGFTPSVTIEQRRLAVDL 1730
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,571,200
Number of Sequences: 237096
Number of extensions: 1781998
Number of successful extensions: 3487
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 3373
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3487
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6804036910
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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