Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120859.seq
         (631 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_0285 - 2360799-2362631                                           29   2.3  
09_01_0150 - 2244757-2245303,2252925-2253277                           29   3.0  
01_07_0229 + 42161770-42164562                                         29   3.0  
03_01_0222 - 1756769-1756801,1756889-1756917,1756975-1757859,175...    28   5.3  
10_08_0211 + 15899017-15901392                                         28   7.0  
04_04_1258 + 32165918-32166041,32167218-32167384,32167569-321677...    28   7.0  
11_01_0518 + 4057428-4057538,4059609-4059801,4059921-4060025,406...    27   9.3  
07_03_0814 + 21700274-21701923,21702282-21702434,21702563-217026...    27   9.3  
07_03_0187 + 14837290-14837680,14839698-14839723                       27   9.3  

>01_01_0285 - 2360799-2362631
          Length = 610

 Score = 29.5 bits (63), Expect = 2.3
 Identities = 13/61 (21%), Positives = 30/61 (49%)
 Frame = +2

Query: 80  LVLSEYADLKYLGFEKYKFFEYVIFQFCNDPHLCKIIENNYNYCMQIFKAPADNMCDIST 259
           L+++    + Y+  E Y+FF ++   +     +C+ + N  ++   + + P   +C  ST
Sbjct: 189 LLVTRLVIVWYIFLESYQFFTFIFSDWHKVKMMCRYVRNE-SWHRALMEVPLKVLCHFST 247

Query: 260 I 262
           I
Sbjct: 248 I 248


>09_01_0150 - 2244757-2245303,2252925-2253277
          Length = 299

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 12/19 (63%), Positives = 14/19 (73%)
 Frame = +1

Query: 304 VLSNKPPMYSFLKEWFLLP 360
           V  + PP Y+FLKE FLLP
Sbjct: 4   VQRSTPPFYNFLKEGFLLP 22


>01_07_0229 + 42161770-42164562
          Length = 930

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 15/49 (30%), Positives = 24/49 (48%)
 Frame = +2

Query: 41  CLRLNDAIIKRHVLVLSEYADLKYLGFEKYKFFEYVIFQFCNDPHLCKI 187
           CL+LN  +IK   + + +   LKYL      F E + +     P+L K+
Sbjct: 556 CLKLNQTLIKSLPVAIGQLTKLKYLNLSYMDFLEKIPYGVI--PNLSKL 602


>03_01_0222 -
           1756769-1756801,1756889-1756917,1756975-1757859,
           1758244-1759273,1759354-1759401,1759626-1760480
          Length = 959

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 14/34 (41%), Positives = 18/34 (52%)
 Frame = +2

Query: 23  LQSKWICLRLNDAIIKRHVLVLSEYADLKYLGFE 124
           LQ  W   RL + I+KR  +    + DLKYL  E
Sbjct: 860 LQPSWGFQRLKEEIVKRFGISQDTHVDLKYLDDE 893


>10_08_0211 + 15899017-15901392
          Length = 791

 Score = 27.9 bits (59), Expect = 7.0
 Identities = 11/46 (23%), Positives = 25/46 (54%), Gaps = 4/46 (8%)
 Frame = +1

Query: 394 LTWGFPHVVVF----DLDSTLITEEEQIQIRDSFVYDSLQELPKWV 519
           +TWGF  ++VF     +   L+++  ++ +   +  DS +  P+W+
Sbjct: 359 ITWGFMFIIVFKELWKMIIYLLSDWTKVMVLCEYTADSFKHAPRWL 404


>04_04_1258 +
           32165918-32166041,32167218-32167384,32167569-32167769,
           32168472-32168631,32168729-32168942,32169160-32169307
          Length = 337

 Score = 27.9 bits (59), Expect = 7.0
 Identities = 14/50 (28%), Positives = 25/50 (50%)
 Frame = +2

Query: 74  HVLVLSEYADLKYLGFEKYKFFEYVIFQFCNDPHLCKIIENNYNYCMQIF 223
           HVL    ++D++YL  EK   + Y + +   +   CK+ E N    + +F
Sbjct: 143 HVLDEDSWSDVEYLTKEKPPAWAYSVSKVLMEKAACKLAEENNISLITVF 192


>11_01_0518 +
           4057428-4057538,4059609-4059801,4059921-4060025,
           4060259-4060347,4060424-4060576,4060754-4060888,
           4061241-4061407,4062129-4062223,4062367-4062740,
           4062903-4063176,4063806-4063822
          Length = 570

 Score = 27.5 bits (58), Expect = 9.3
 Identities = 22/77 (28%), Positives = 36/77 (46%)
 Frame = -2

Query: 552 LYCHTTTRLKRNPFRQFLQAVIHKRISNLNLLLFGYESAVQIEHDHVRKSPRQRFAFERD 373
           LY H    +K N  R     +IH  ++  +  L   E+  +++  +  K  +   AF R 
Sbjct: 152 LYTHKNIVVKYNGNR-----IIHVNLTQESPKLL--EAGKKLDMTYSVKWVQTNVAFAR- 203

Query: 372 HFVVWQQKPFFKKRIHW 322
            F V+   PFF+ +IHW
Sbjct: 204 RFEVYLDYPFFEHQIHW 220


>07_03_0814 +
           21700274-21701923,21702282-21702434,21702563-21702634,
           21702923-21703033
          Length = 661

 Score = 27.5 bits (58), Expect = 9.3
 Identities = 12/37 (32%), Positives = 21/37 (56%)
 Frame = -1

Query: 574 ASSVLHESLLPYDHKTKTQPISAIPASCHTQTNLEFE 464
           ASS+L  +LLP+ H+ +  P     +S  + T  +F+
Sbjct: 3   ASSLLPPTLLPHRHRLRLPPAGCSTSSSPSATRYDFD 39


>07_03_0187 + 14837290-14837680,14839698-14839723
          Length = 138

 Score = 27.5 bits (58), Expect = 9.3
 Identities = 13/30 (43%), Positives = 16/30 (53%)
 Frame = +2

Query: 230 PADNMCDISTILNAHSKRQCWATCVCLATN 319
           P D + D S  +N  + RQ W  C CL TN
Sbjct: 90  PEDMVYDSSGNVNGQATRQAWLRC-CLHTN 118


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,223,658
Number of Sequences: 37544
Number of extensions: 380662
Number of successful extensions: 875
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 846
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 875
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1537558360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)