Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120859.seq
         (631 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z98877-5|CAD56616.1|  731|Caenorhabditis elegans Hypothetical pr...    31   0.51 
Z98877-4|CAB54473.2|  796|Caenorhabditis elegans Hypothetical pr...    31   0.51 
U41029-3|AAF99952.2|  886|Caenorhabditis elegans Hypothetical pr...    31   0.68 
AL032639-1|CAA21638.1|  373|Caenorhabditis elegans Hypothetical ...    28   4.8  
AF022976-4|AAC69083.2|  345|Caenorhabditis elegans Serpentine re...    28   6.3  
Z70680-5|CAA94574.1|  402|Caenorhabditis elegans Hypothetical pr...    27   8.4  
U97009-4|AAC69035.1|  336|Caenorhabditis elegans Seven tm recept...    27   8.4  

>Z98877-5|CAD56616.1|  731|Caenorhabditis elegans Hypothetical
           protein Y69H2.3c protein.
          Length = 731

 Score = 31.5 bits (68), Expect = 0.51
 Identities = 11/24 (45%), Positives = 17/24 (70%)
 Frame = +2

Query: 236 DNMCDISTILNAHSKRQCWATCVC 307
           DN CD+++I    +K QC++ CVC
Sbjct: 690 DNQCDLASISMIANKDQCFSGCVC 713


>Z98877-4|CAB54473.2|  796|Caenorhabditis elegans Hypothetical
           protein Y69H2.3b protein.
          Length = 796

 Score = 31.5 bits (68), Expect = 0.51
 Identities = 11/24 (45%), Positives = 17/24 (70%)
 Frame = +2

Query: 236 DNMCDISTILNAHSKRQCWATCVC 307
           DN CD+++I    +K QC++ CVC
Sbjct: 755 DNQCDLASISMIANKDQCFSGCVC 778


>U41029-3|AAF99952.2|  886|Caenorhabditis elegans Hypothetical
           protein F47G3.1 protein.
          Length = 886

 Score = 31.1 bits (67), Expect = 0.68
 Identities = 17/71 (23%), Positives = 34/71 (47%), Gaps = 2/71 (2%)
 Frame = +1

Query: 283 PVLGHMCVLSNKPPMYSFLKEWFLLPHYKVVSLKSESLTWGFPHVVVFDLDSTLITEEEQ 462
           P+ GH+ ++  K      + +   +P Y  V  + + +TW F        DST +T+  +
Sbjct: 155 PIEGHVHIIPIKNNAVRLVPDLKYMPKYDYVEPEKKIMTWAFVDSCTALNDSTKLTDYSE 214

Query: 463 IQI--RDSFVY 489
           + +  R +FV+
Sbjct: 215 VGVDSRATFVF 225


>AL032639-1|CAA21638.1|  373|Caenorhabditis elegans Hypothetical
           protein F18A11.5 protein.
          Length = 373

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 9/32 (28%), Positives = 22/32 (68%)
 Frame = -1

Query: 517 PISAIPASCHTQTNLEFEFAPLRL*ECCPNRT 422
           P SA+  SCH +++++ + + + + +C PN++
Sbjct: 218 PKSALSTSCHQKSSIDSKLSTITISKCPPNQS 249


>AF022976-4|AAC69083.2|  345|Caenorhabditis elegans Serpentine
           receptor, class h protein37 protein.
          Length = 345

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 13/32 (40%), Positives = 17/32 (53%), Gaps = 2/32 (6%)
 Frame = +1

Query: 274 FKTPV--LGHMCVLSNKPPMYSFLKEWFLLPH 363
           F TP+  L H CVL+  P  +  LK W +  H
Sbjct: 26  FVTPIYPLAHYCVLTKSPKSFGILK-WIIYVH 56


>Z70680-5|CAA94574.1|  402|Caenorhabditis elegans Hypothetical
           protein C25G4.8 protein.
          Length = 402

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 19/70 (27%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
 Frame = +2

Query: 14  ASSLQSKWICLR-LNDAIIKRHVLVLSEYADLKYLGFEKYKFFEYVIFQFCNDPHLCKII 190
           A S+QS  ICL  +   I K+  L+  + A   +    ++K FE  + +   + H C+ +
Sbjct: 249 ADSVQSIDICLTYMITGIYKKPALLSPKLAFEIFALAMQWKVFEPKVLKNSIEKHCCEEL 308

Query: 191 ENNYNYCMQI 220
           + NY   M +
Sbjct: 309 QKNYEDIMYV 318


>U97009-4|AAC69035.1|  336|Caenorhabditis elegans Seven tm receptor
           protein 32 protein.
          Length = 336

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 15/47 (31%), Positives = 20/47 (42%)
 Frame = +2

Query: 407 FRTWSCSIWTALS*PKRSKFKFEIRLCMTACRNCRNGLRFSLVVVWQ 547
           F TW C +W          + F I  C  + R  RN +R SL   +Q
Sbjct: 128 FNTWRCVVWFLYVFLIGMGWSFMIYFCAPSDRYSRNYMRESLFDTYQ 174


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,832,725
Number of Sequences: 27780
Number of extensions: 352940
Number of successful extensions: 980
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 945
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 980
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1385109898
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)