Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120856.seq
         (636 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2 prot...    23   1.6  
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    23   2.1  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    23   2.1  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   8.6  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   8.6  
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    21   8.6  

>AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2
           protein.
          Length = 377

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 10/31 (32%), Positives = 19/31 (61%)
 Frame = -2

Query: 134 FSKYKVSRLVFSYFFAHFQYNYGRCRRVLCY 42
           F+K+ V+    + F  H Q+++G   +V+CY
Sbjct: 2   FAKFWVN---LALFCLHVQHSHGATDKVICY 29


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 13/42 (30%), Positives = 21/42 (50%)
 Frame = +2

Query: 242 DIRLSENKDKFLTKTVKRRDFNDGVKQIEHDFANNVPLEQVV 367
           D+ L  +    LT T+KR+ +N   K + HD      L Q++
Sbjct: 142 DVTLWLSNVNSLTLTLKRKKWNLLFKTLTHDEPRKSSLVQLI 183


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 13/42 (30%), Positives = 21/42 (50%)
 Frame = +2

Query: 242 DIRLSENKDKFLTKTVKRRDFNDGVKQIEHDFANNVPLEQVV 367
           D+ L  +    LT T+KR+ +N   K + HD      L Q++
Sbjct: 68  DVTLWLSNVNSLTLTLKRKKWNLLFKTLTHDEPRKSSLVQLI 109


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 7/15 (46%), Positives = 8/15 (53%)
 Frame = +3

Query: 144 YPAWPARVQRLNGKK 188
           YP W +R     GKK
Sbjct: 543 YPDWSSRANATRGKK 557


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 7/15 (46%), Positives = 8/15 (53%)
 Frame = +3

Query: 144 YPAWPARVQRLNGKK 188
           YP W +R     GKK
Sbjct: 435 YPDWSSRANATRGKK 449


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 7/22 (31%), Positives = 13/22 (59%)
 Frame = -2

Query: 149 WISFNFSKYKVSRLVFSYFFAH 84
           W++F    YK+++   S FF +
Sbjct: 162 WVNFERIYYKLTKKKLSVFFGN 183


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 137,623
Number of Sequences: 336
Number of extensions: 2761
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16397237
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)