Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120855.seq
(634 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 26 0.26
AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 25 0.46
AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 25 0.46
AF134817-1|AAD40233.1| 105|Apis mellifera FABP-like protein pro... 23 2.5
AB083011-1|BAC54132.1| 135|Apis mellifera fatty acid binding pr... 23 2.5
DQ435328-1|ABD92643.1| 143|Apis mellifera OBP11 protein. 23 3.3
DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex det... 23 3.3
DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex det... 23 3.3
DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex det... 23 3.3
DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex det... 23 3.3
AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor ... 22 5.7
AB095514-1|BAC76336.1| 72|Apis mellifera ecdyson receptor prot... 22 5.7
AY395073-1|AAQ96729.1| 203|Apis mellifera GABA neurotransmitter... 21 7.5
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 21 7.5
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 21 7.5
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 26.2 bits (55), Expect = 0.26
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +1
Query: 124 YNLSINIYIYFNTNSNIDLKLLLYNIS 204
YN + N Y +N N N + K L YNI+
Sbjct: 330 YNNNYNNYNNYNNNYNNNYKKLYYNIN 356
>AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 25.4 bits (53), Expect = 0.46
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +1
Query: 130 LSINIYIYFNTNSNIDLKLLLYNI 201
+S N Y Y N N+N + K L YNI
Sbjct: 304 ISSNNYNYKNYNNNYNSKKLYYNI 327
>AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 25.4 bits (53), Expect = 0.46
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +1
Query: 130 LSINIYIYFNTNSNIDLKLLLYNI 201
+S N Y Y N N+N + K L YNI
Sbjct: 315 ISSNNYNYKNYNNNYNSKKLYYNI 338
>AF134817-1|AAD40233.1| 105|Apis mellifera FABP-like protein
protein.
Length = 105
Score = 23.0 bits (47), Expect = 2.5
Identities = 9/26 (34%), Positives = 17/26 (65%)
Frame = -2
Query: 369 KFVNLNTFKHFASISSNTLLVNFMIR 292
+FV+ N F+ FA + + LVN +++
Sbjct: 7 QFVSQNNFEEFAKVLGDQNLVNTVLQ 32
>AB083011-1|BAC54132.1| 135|Apis mellifera fatty acid binding
protein protein.
Length = 135
Score = 23.0 bits (47), Expect = 2.5
Identities = 9/26 (34%), Positives = 17/26 (65%)
Frame = -2
Query: 369 KFVNLNTFKHFASISSNTLLVNFMIR 292
+FV+ N F+ FA + + LVN +++
Sbjct: 9 QFVSQNNFEEFAKVLGDQNLVNTVLQ 34
>DQ435328-1|ABD92643.1| 143|Apis mellifera OBP11 protein.
Length = 143
Score = 22.6 bits (46), Expect = 3.3
Identities = 7/20 (35%), Positives = 13/20 (65%)
Frame = -1
Query: 85 QFQCYLHGILALLNILHKKN 26
+ +CY + +L N++ KKN
Sbjct: 67 KLKCYFNCVLEKFNVMDKKN 86
>DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex
determiner protein.
Length = 186
Score = 22.6 bits (46), Expect = 3.3
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +1
Query: 121 VYNLSINIYIYFNTNSNIDLKLLLYNIS 204
++N + Y Y N N N + K L YNI+
Sbjct: 90 IHNNNNYKYNYNNNNYNNNCKKLYYNIN 117
>DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 22.6 bits (46), Expect = 3.3
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +1
Query: 121 VYNLSINIYIYFNTNSNIDLKLLLYNIS 204
++N + Y Y N N N + K L YNI+
Sbjct: 90 IHNNNNYKYNYNNNNYNNNCKKLYYNIN 117
>DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 22.6 bits (46), Expect = 3.3
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +1
Query: 121 VYNLSINIYIYFNTNSNIDLKLLLYNIS 204
++N + Y Y N N N + K L YNI+
Sbjct: 90 IHNNNNYKYNYNNNNYNNNCKKLYYNIN 117
>DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 22.6 bits (46), Expect = 3.3
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +1
Query: 121 VYNLSINIYIYFNTNSNIDLKLLLYNIS 204
++N + Y Y N N N + K L YNI+
Sbjct: 90 IHNNNNYKYNYNNNNYNNNCKKLYYNIN 117
>AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor A
isoform protein.
Length = 567
Score = 21.8 bits (44), Expect = 5.7
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = +3
Query: 27 FFLCNIFNNARMPCK*H*NCDLVMFKK 107
FF +I NA CK NC++ M+ +
Sbjct: 210 FFRRSITKNAVYQCKYGNNCEIDMYMR 236
>AB095514-1|BAC76336.1| 72|Apis mellifera ecdyson receptor
protein.
Length = 72
Score = 21.8 bits (44), Expect = 5.7
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = +3
Query: 27 FFLCNIFNNARMPCK*H*NCDLVMFKK 107
FF +I NA CK NC++ M+ +
Sbjct: 7 FFRRSITKNAVYQCKYGNNCEIDMYMR 33
>AY395073-1|AAQ96729.1| 203|Apis mellifera GABA neurotransmitter
transporter-1A protein.
Length = 203
Score = 21.4 bits (43), Expect = 7.5
Identities = 6/7 (85%), Positives = 6/7 (85%)
Frame = +2
Query: 263 LCYFCDW 283
LCYFC W
Sbjct: 186 LCYFCIW 192
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 21.4 bits (43), Expect = 7.5
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = +2
Query: 263 LCYFCDWSFMRIIKFTNNVL 322
+CYFC W + +K+T V+
Sbjct: 219 MCYFCIW---KGVKWTGKVV 235
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 21.4 bits (43), Expect = 7.5
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = +2
Query: 263 LCYFCDWSFMRIIKFTNNVL 322
+CYFC W + +K+T V+
Sbjct: 272 MCYFCIW---KGVKWTGKVV 288
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,653
Number of Sequences: 438
Number of extensions: 3011
Number of successful extensions: 15
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18949215
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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