Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120853.seq
(642 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_01_0367 - 2874429-2874483,2876274-2876345,2876453-2879613,287... 32 0.45
01_05_0653 - 23948911-23948937,23949031-23949141,23949361-239494... 31 0.59
01_05_0652 - 23934604-23934636,23934783-23934893,23935000-239351... 31 0.59
01_01_0489 + 3608720-3608811,3609326-3609431,3609518-3609581,360... 31 0.78
07_03_1022 - 23353054-23353263,23353399-23353505,23354613-23354961 31 1.0
03_02_0594 - 9695616-9696042,9696646-9697260,9697410-9697717,970... 31 1.0
02_04_0114 + 19879468-19880671,19882007-19882179,19882265-198826... 29 2.4
05_05_0382 + 24547680-24548760,24548887-24549033,24549389-24550023 29 3.1
05_03_0069 + 8004235-8004350,8004927-8005215,8005314-8005375,800... 29 3.1
05_01_0251 + 1901709-1901864,1901968-1901999,1902534-1902664,190... 29 3.1
04_04_1393 - 33204699-33204806,33204927-33205164,33205581-332058... 29 3.1
03_05_0898 + 28610123-28610203,28611190-28611271,28611666-286117... 29 3.1
12_02_0998 + 25126114-25126596,25129213-25129339,25129349-251294... 29 4.1
04_03_0904 + 20717005-20718087 29 4.1
02_04_0005 - 18843061-18843201,18843309-18843440,18844457-188453... 29 4.1
09_06_0277 - 21983049-21983080,21983250-21984788,21986619-219866... 28 5.5
09_02_0082 - 4060018-4061604 28 7.2
08_02_0744 - 20659326-20659580,20659748-20660005,20660103-206615... 28 7.2
07_03_1432 - 26508135-26508881,26509301-26509708 28 7.2
05_01_0404 - 3185603-3185920,3186877-3186993,3187087-3187107 28 7.2
03_03_0168 - 15047383-15047847,15048085-15048192,15048313-150484... 28 7.2
02_01_0611 - 4567839-4568144,4568280-4569209,4569301-4569566,456... 28 7.2
12_01_1068 - 11052769-11052943,11053103-11053182,11053304-110534... 27 9.6
09_04_0151 - 15154063-15154296,15155616-15155660,15155749-151558... 27 9.6
06_03_0189 - 17697779-17698939 27 9.6
06_01_0501 - 3587390-3587528,3587922-3588031,3588122-3588187,358... 27 9.6
03_02_0137 + 5832608-5833590,5833680-5833731,5833827-5833904,583... 27 9.6
>05_01_0367 - 2874429-2874483,2876274-2876345,2876453-2879613,
2879715-2879973,2880060-2880346,2880423-2880758,
2880862-2881003,2881077-2881297,2881379-2881540,
2881617-2881775,2881860-2882159,2882834-2883097,
2883133-2883243,2883902-2883988
Length = 1871
Score = 31.9 bits (69), Expect = 0.45
Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Frame = +2
Query: 62 YNTPPPPLRY-PSNPATAIFTNAQTYN-NAPGYVPPTTRDNKMDTSRSNSTNSVAIAPYN 235
YN P Y P++P+ + + + +Y+ +P Y P + N TS S S S + +P +
Sbjct: 1697 YNPTSPSYSYSPTSPSYSPTSPSYSYSPTSPSYSPTSPSYNYSPTSPSYSPTSPSYSPTS 1756
Query: 236 KSKEPT 253
S PT
Sbjct: 1757 PSYSPT 1762
Score = 28.7 bits (61), Expect = 4.1
Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Frame = +2
Query: 59 YYNTPPPPLRYPSNPATAIFTNAQTYN-NAPGYVPPTTRDNKMDTSRSNSTNSVAIAPYN 235
Y +P P P++P+ + + +Y+ +P Y T + TS S S S + +P +
Sbjct: 1704 YSYSPTSPSYSPTSPSYSYSPTSPSYSPTSPSYNYSPTSPSYSPTSPSYSPTSPSYSPTS 1763
Query: 236 KSKEPT 253
S PT
Sbjct: 1764 PSYSPT 1769
>01_05_0653 -
23948911-23948937,23949031-23949141,23949361-23949441,
23949865-23949984,23950088-23950252,23950344-23950493,
23950565-23950674,23951401-23951518,23951597-23951827,
23952345-23952524,23953639-23953908,23954930-23954979,
23955213-23955288,23955396-23955483,23956010-23956101,
23956200-23956529,23957484-23957593,23957810-23957907,
23959538-23959566
Length = 811
Score = 31.5 bits (68), Expect = 0.59
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = +1
Query: 112 HIHQRANLQQRARVRAAYDARQQNGHEPQQQHKLGSD 222
H HQ+ +QQ RAA +QQ + QQQ +L D
Sbjct: 100 HQHQQIQMQQMLLQRAAQQQQQQQQQQQQQQQQLHRD 136
>01_05_0652 -
23934604-23934636,23934783-23934893,23935000-23935188,
23935893-23936012,23936109-23936273,23936638-23936790,
23936867-23936976,23937280-23937397,23938197-23938427,
23938984-23939175,23939661-23939945,23940637-23940686,
23940846-23940921,23941048-23941135,23941689-23941771,
23941883-23942248,23942462-23942476,23942909-23943018,
23943134-23943231,23943961-23944019
Length = 883
Score = 31.5 bits (68), Expect = 0.59
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = +1
Query: 121 QRANLQQRARVRAAYDARQQNGHEPQQQHKLGSDRTVQQEQRTD 252
Q +QQ RAA +QQ + QQQ + + QQ+QR D
Sbjct: 120 QHIQMQQMLLQRAAQQQQQQQQQQQQQQQQQQQQQQQQQQQRRD 163
>01_01_0489 +
3608720-3608811,3609326-3609431,3609518-3609581,
3609905-3609965,3610017-3610144,3610236-3610385,
3610537-3610791,3611060-3611265,3611469-3611696,
3612161-3612259
Length = 462
Score = 31.1 bits (67), Expect = 0.78
Identities = 22/81 (27%), Positives = 40/81 (49%)
Frame = -1
Query: 504 LGRVALSQLFLQPNQVAYHGLLRFKPLYHVYVDRVRVDAHVTNSVYKMNHERTKF*HVIA 325
+GR+ P+ A GLLR P++ V++D VRV + +Y++ + K+ +A
Sbjct: 247 VGRLVKGSSKPHPSLPARGGLLRTAPVHEVHLDLVRVS---SGKIYRLRNPSRKY---LA 300
Query: 324 PVISNNFLNKIHTFVVPNRFA 262
+ S + N + PN +A
Sbjct: 301 SLSSYDSSNPTKDWGFPNIYA 321
>07_03_1022 - 23353054-23353263,23353399-23353505,23354613-23354961
Length = 221
Score = 30.7 bits (66), Expect = 1.0
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +2
Query: 71 PPPPLRYPSNPATAIFTNAQTYNNAPGYVPPTTRDNKMDT 190
PPPP P +P A+F +A+ +P P+TR ++ T
Sbjct: 5 PPPPSAPPPSPPRAVFPSARCCLPSPHRFLPSTRRKRLVT 44
>03_02_0594 -
9695616-9696042,9696646-9697260,9697410-9697717,
9700145-9700235,9700698-9700759,9701256-9702962,
9703789-9703870,9703972-9704057,9704855-9704968,
9705113-9705163,9705261-9705358,9707084-9707546
Length = 1367
Score = 30.7 bits (66), Expect = 1.0
Identities = 15/57 (26%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +1
Query: 274 WYNKCVDFVQKIIRYYRCNDMSELSPLMIHFINTIRDMCIDTNPINVNV-VKRFESE 441
WY +C+D Q+ +R RC+D + P + + ++ C ++ + V RF +E
Sbjct: 473 WYRECLDLFQEFVR-VRCSDGDGVGPNGV-TVTSVLHACAQLKVVDFGIGVHRFAAE 527
>02_04_0114 +
19879468-19880671,19882007-19882179,19882265-19882605,
19882698-19882977,19883070-19883267,19883380-19883652
Length = 822
Score = 29.5 bits (63), Expect = 2.4
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = +3
Query: 540 RLC*IRCRRTRKNFTTVGADMLGKDALAE 626
R+ I CRRT+ + VGA +GK A+AE
Sbjct: 207 RVVCILCRRTKNSAVLVGAPGVGKTAIAE 235
>05_05_0382 + 24547680-24548760,24548887-24549033,24549389-24550023
Length = 620
Score = 29.1 bits (62), Expect = 3.1
Identities = 19/62 (30%), Positives = 26/62 (41%)
Frame = +1
Query: 61 LQHPSAAAEVSL*SGNGHIHQRANLQQRARVRAAYDARQQNGHEPQQQHKLGSDRTVQQE 240
L SA A V+L S H H RA A + +N P G+DR+ + E
Sbjct: 540 LPRRSACASVALKSSGCHHHVRAGAAAAAHGSVRTSRQSRNNAPPMAPTIRGADRSSEGE 599
Query: 241 QR 246
+R
Sbjct: 600 RR 601
>05_03_0069 +
8004235-8004350,8004927-8005215,8005314-8005375,
8005516-8005602,8005667-8005723,8005940-8006004,
8006292-8006320
Length = 234
Score = 29.1 bits (62), Expect = 3.1
Identities = 18/60 (30%), Positives = 27/60 (45%)
Frame = +2
Query: 74 PPPLRYPSNPATAIFTNAQTYNNAPGYVPPTTRDNKMDTSRSNSTNSVAIAPYNKSKEPT 253
PPP + NP+T I + + P P + +K T +++ST AI S E T
Sbjct: 146 PPPAPHTDNPSTTIHNTGASSKSTP---PEISLADKTPTEKTSSTRKRAIDFTKDSIEET 202
>05_01_0251 +
1901709-1901864,1901968-1901999,1902534-1902664,
1902740-1902821,1902928-1903054,1903369-1903686,
1903785-1903846,1903988-1904074,1904139-1904195,
1906113-1906197,1906916-1907185,1908158-1908254,
1908390-1908436,1908826-1908939,1909024-1909117,
1909360-1909457,1910356-1910455,1911445-1911521,
1911824-1913122
Length = 1110
Score = 29.1 bits (62), Expect = 3.1
Identities = 18/60 (30%), Positives = 27/60 (45%)
Frame = +2
Query: 74 PPPLRYPSNPATAIFTNAQTYNNAPGYVPPTTRDNKMDTSRSNSTNSVAIAPYNKSKEPT 253
PPP + NP+T I + + P P + +K T +++ST AI S E T
Sbjct: 293 PPPAPHTDNPSTTIHNTGASSKSTP---PEISLADKTPTEKTSSTTKRAIDFTKDSIEET 349
>04_04_1393 -
33204699-33204806,33204927-33205164,33205581-33205825,
33206229-33206339,33206645-33206743,33207684-33207731,
33207882-33207999,33208085-33208115,33208700-33208806,
33209644-33209725,33210010-33210104,33210579-33210664,
33211074-33211195,33211613-33211824,33212362-33212510,
33212755-33212982
Length = 692
Score = 29.1 bits (62), Expect = 3.1
Identities = 11/28 (39%), Positives = 20/28 (71%)
Frame = +1
Query: 304 KIIRYYRCNDMSELSPLMIHFINTIRDM 387
KII Y+ N+++++S L HFI+ + D+
Sbjct: 599 KIIESYKSNNVNQVSNLCQHFIDLVNDL 626
>03_05_0898 +
28610123-28610203,28611190-28611271,28611666-28611721,
28612253-28612366,28612484-28612546,28612633-28612752,
28612850-28612950,28613097-28613156,28613243-28613342,
28613421-28613575,28613661-28613756,28614269-28614403,
28614510-28614573,28614648-28614729,28615038-28615213,
28615302-28615378,28615637-28615769,28615939-28616055,
28616394-28616398,28616564-28616684,28616711-28617751
Length = 992
Score = 29.1 bits (62), Expect = 3.1
Identities = 15/48 (31%), Positives = 23/48 (47%), Gaps = 3/48 (6%)
Frame = +2
Query: 17 RVQIKSMTDERGNFYYNTPPPP---LRYPSNPATAIFTNAQTYNNAPG 151
+V I+S+ RG FY+N P L + P T +F + + PG
Sbjct: 821 KVPIRSIAACRGKFYFNATPESVGVLEFTPTPTTPVFGSIAIADPLPG 868
>12_02_0998 +
25126114-25126596,25129213-25129339,25129349-25129459,
25130122-25130270,25130356-25130643,25130753-25130941,
25131445-25131619,25132219-25132316
Length = 539
Score = 28.7 bits (61), Expect = 4.1
Identities = 18/67 (26%), Positives = 26/67 (38%), Gaps = 3/67 (4%)
Frame = +2
Query: 71 PPPPLRYPSNPATAIFTNAQTYNNAPGYVPPTTRDN---KMDTSRSNSTNSVAIAPYNKS 241
PPPP +PSN + Y P ++PP +D+ D I+ Y +
Sbjct: 310 PPPPWGHPSN----VPPGGPGYGGNPQFMPPRPQDHYYPPPDVPPVEKQPHYGISSYGRD 365
Query: 242 KEPTPTP 262
PT P
Sbjct: 366 APPTGAP 372
>04_03_0904 + 20717005-20718087
Length = 360
Score = 28.7 bits (61), Expect = 4.1
Identities = 19/69 (27%), Positives = 24/69 (34%), Gaps = 6/69 (8%)
Frame = +2
Query: 74 PPPLRYPSNPATAIFTNAQTYNNAPGYVP------PTTRDNKMDTSRSNSTNSVAIAPYN 235
PPP P T TY P P PT + N T + + PY
Sbjct: 257 PPPTYKPQPKPTPTPYTPPTYKPQPKPTPTPTPYTPTPKPNPPPTYKPQPKPTPTPTPYK 316
Query: 236 KSKEPTPTP 262
+PTP+P
Sbjct: 317 PQPKPTPSP 325
Score = 28.3 bits (60), Expect = 5.5
Identities = 20/68 (29%), Positives = 26/68 (38%), Gaps = 4/68 (5%)
Frame = +2
Query: 71 PPPPLRYPS-NPATAIFT---NAQTYNNAPGYVPPTTRDNKMDTSRSNSTNSVAIAPYNK 238
P PP P P A +T TY P PP T + + + T + Y
Sbjct: 121 PTPPTYKPQPKPTPAPYTPTPTPPTYKPQPKPTPPPTYKPQPKPTPTPYTPTPTPPSYKP 180
Query: 239 SKEPTPTP 262
+PTPTP
Sbjct: 181 QPKPTPTP 188
>02_04_0005 -
18843061-18843201,18843309-18843440,18844457-18845315,
18845884-18845973,18846748-18846869,18846950-18847049,
18847151-18847205,18847275-18847365,18847453-18847572,
18847681-18847780,18847890-18848018,18848099-18848201,
18848670-18848743,18848848-18848933,18849297-18849358,
18849454-18849541,18849937-18850029
Length = 814
Score = 28.7 bits (61), Expect = 4.1
Identities = 15/49 (30%), Positives = 22/49 (44%)
Frame = +2
Query: 47 RGNFYYNTPPPPLRYPSNPATAIFTNAQTYNNAPGYVPPTTRDNKMDTS 193
+G+ Y PPPP P A+F + Y PPT R+ ++ S
Sbjct: 665 KGSTCYPPPPPPSSTPPVEPVAVFPPPPSPACGVYYPPPTVREPVINRS 713
>09_06_0277 -
21983049-21983080,21983250-21984788,21986619-21986655,
21987612-21987665,21987781-21987893,21988272-21988660,
21988783-21988903,21989245-21989342,21989963-21990153
Length = 857
Score = 28.3 bits (60), Expect = 5.5
Identities = 18/69 (26%), Positives = 25/69 (36%), Gaps = 1/69 (1%)
Frame = +2
Query: 68 TPPPPLRYPSNP-ATAIFTNAQTYNNAPGYVPPTTRDNKMDTSRSNSTNSVAIAPYNKSK 244
TP PP+ YPS P T Y + P P + + + I PY
Sbjct: 550 TPMPPIIYPSPPEVTPSPPEITPYPSPPEVTPGPPEITPYPSPPEITPSPPEITPYPSPP 609
Query: 245 EPTPTPANL 271
E P+P +
Sbjct: 610 EVVPSPPKI 618
>09_02_0082 - 4060018-4061604
Length = 528
Score = 27.9 bits (59), Expect = 7.2
Identities = 17/76 (22%), Positives = 27/76 (35%)
Frame = +2
Query: 38 TDERGNFYYNTPPPPLRYPSNPATAIFTNAQTYNNAPGYVPPTTRDNKMDTSRSNSTNSV 217
T RG P PP+ P A +PPTT ++ ++S+ +
Sbjct: 43 TTTRGPTLLFLPAPPVPAPLVHAPPTLAPPLVVPRGGWTIPPTTSNDCFGDGHASSSTAA 102
Query: 218 AIAPYNKSKEPTPTPA 265
+ S P P P+
Sbjct: 103 PLTAAGHSTPPEPVPS 118
>08_02_0744 -
20659326-20659580,20659748-20660005,20660103-20661575,
20661677-20661835,20661948-20662074,20662155-20662486,
20662574-20663383,20663772-20664110,20664187-20664340,
20664427-20665143,20665699-20665967
Length = 1630
Score = 27.9 bits (59), Expect = 7.2
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = +1
Query: 499 AESRPSDSNIFQGIVCAK 552
A PSDSN+ +G+VC+K
Sbjct: 322 ASGDPSDSNLVRGVVCSK 339
>07_03_1432 - 26508135-26508881,26509301-26509708
Length = 384
Score = 27.9 bits (59), Expect = 7.2
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Frame = +2
Query: 68 TPPPPLRYPSNPATAIFTNAQTYNNAPGYVPP-TTRDNKMDTSRSNSTNSVAIAPYNKSK 244
+PP P+ YPS P+ + T P Y PP +T + S S T + +P S
Sbjct: 27 SPPTPITYPSPPSLSPST-------PPTYPPPSSTPPSLAPVSPSPPTTYLPPSPTPPSP 79
Query: 245 EP-TPTPANL 271
P +P+P +L
Sbjct: 80 APASPSPPSL 89
>05_01_0404 - 3185603-3185920,3186877-3186993,3187087-3187107
Length = 151
Score = 27.9 bits (59), Expect = 7.2
Identities = 15/49 (30%), Positives = 24/49 (48%), Gaps = 3/49 (6%)
Frame = +1
Query: 136 QQRARVRAAYDARQQNGHEP---QQQHKLGSDRTVQQEQRTDADAGESI 273
+++ R D +QQ H P QQQ + + QQ+Q +DA S+
Sbjct: 57 RKKRRQELGLDKKQQQEHHPHHHQQQQQQYQRQQQQQQQEDHSDAASSV 105
>03_03_0168 -
15047383-15047847,15048085-15048192,15048313-15048464,
15048555-15048752,15049553-15050856,15051281-15051354,
15051458-15051492,15052853-15053015
Length = 832
Score = 27.9 bits (59), Expect = 7.2
Identities = 25/84 (29%), Positives = 34/84 (40%), Gaps = 12/84 (14%)
Frame = +2
Query: 71 PPPPLRYPSNPATA----IFTNAQTYNNAP-------GYVPPTTRDNKMDTSRSNSTNS- 214
PPPP P +PAT F AQ N P ++PP + TS S S
Sbjct: 721 PPPPAAAPISPATTPKEPPFQQAQANQNMPRQAAAPREHLPPPPPLTTLPTSDSGSAKER 780
Query: 215 VAIAPYNKSKEPTPTPANLFGTTN 286
+ P + + P T +LF T+
Sbjct: 781 LPPTPKKQPEPPVVTLDDLFRKTH 804
>02_01_0611 -
4567839-4568144,4568280-4569209,4569301-4569566,
4569662-4569970,4570497-4570647,4570958-4571012,
4571137-4571512,4571560-4571797,4571878-4572096,
4572629-4572910
Length = 1043
Score = 27.9 bits (59), Expect = 7.2
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +3
Query: 552 IRCRRTRKNFTTVGADMLGKDALAE 626
I CRRT+ N +G +GK A+AE
Sbjct: 347 ILCRRTKNNPVIIGEPGVGKTAIAE 371
>12_01_1068 -
11052769-11052943,11053103-11053182,11053304-11053401,
11053487-11053627,11053701-11053841,11053933-11054017,
11055296-11055826,11055926-11055940
Length = 421
Score = 27.5 bits (58), Expect = 9.6
Identities = 15/56 (26%), Positives = 26/56 (46%)
Frame = +2
Query: 62 YNTPPPPLRYPSNPATAIFTNAQTYNNAPGYVPPTTRDNKMDTSRSNSTNSVAIAP 229
++ PPP Y + A ++++ +Y PP D + +S S +VA AP
Sbjct: 77 WDPPPPSSPYSAGHAADEYSSSSSYRRRGASAPP-AEDVVVSSSYSRPAAAVASAP 131
>09_04_0151 -
15154063-15154296,15155616-15155660,15155749-15155820,
15155932-15156024,15156282-15156351,15156716-15156912,
15156946-15157215,15158620-15158757,15158841-15158930,
15159041-15159247,15159987-15160154,15160300-15160503,
15160584-15160670,15160748-15160861,15161689-15161835,
15161914-15162063,15162211-15162276,15162376-15162480,
15162625-15162798,15162930-15163154,15163534-15163590,
15163858-15164019,15164234-15164302,15164391-15164471,
15164823-15164925,15165011-15165156,15165285-15165359,
15165441-15165508,15165586-15165667,15165745-15165858,
15166358-15166476,15166692-15166781,15166862-15166988
Length = 1382
Score = 27.5 bits (58), Expect = 9.6
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +1
Query: 136 QQRARVRAAYDARQQNGHEPQQQHKLGSDRTVQQE 240
QQ+A Y+ QQN Q+Q K+ +++ +QE
Sbjct: 588 QQKASFHEKYEELQQNALVAQEQAKIANEKLSKQE 622
>06_03_0189 - 17697779-17698939
Length = 386
Score = 27.5 bits (58), Expect = 9.6
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +2
Query: 71 PPPPLRYPSNPATAIFTNAQTYNNAPGYVPPT 166
PPPPL ++ + A A T + +PG P T
Sbjct: 293 PPPPLPSAADKSPATAAEAATASQSPGLSPTT 324
>06_01_0501 -
3587390-3587528,3587922-3588031,3588122-3588187,
3588293-3588410,3588499-3588554,3588647-3588766,
3588937-3589035,3589443-3589490,3589534-3589545,
3590353-3590418,3591412-3591471,3592061-3592162,
3592405-3592426,3592959-3593041,3593166-3593293,
3593775-3593881,3594376-3594845
Length = 601
Score = 27.5 bits (58), Expect = 9.6
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +1
Query: 349 PLMIHFINTIRDMCIDTNPINVNVVKRFESEETM 450
P I +++TIR MC+ +P NV R E++M
Sbjct: 237 PCFILWMSTIRTMCLSNHPGLDNVCTRKPCEQSM 270
>03_02_0137 +
5832608-5833590,5833680-5833731,5833827-5833904,
5835228-5835347,5835618-5835716,5835821-5835975,
5836117-5836257,5836395-5836503
Length = 578
Score = 27.5 bits (58), Expect = 9.6
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Frame = +2
Query: 98 NPATAIFTNAQTYNNAPGYV--PPTTRDNKMDTSRSNSTNSVAIAPYNKSKEPTPTP 262
NP A ++A + N P + PP ++ K T+ S S ++ A A K P P P
Sbjct: 70 NPTLARLSHASSENAHPNILGSPPPSKPAKSPTTASKSASASASA-RKKISTPAPPP 125
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,701,596
Number of Sequences: 37544
Number of extensions: 359810
Number of successful extensions: 1569
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1429
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1557
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1584867848
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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