Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120853.seq
(642 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024790-4|AAF60636.1| 121|Caenorhabditis elegans Hypothetical ... 37 0.014
AC024790-5|AAF60640.2| 119|Caenorhabditis elegans Hypothetical ... 36 0.033
Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical pr... 32 0.30
Z47811-2|CAA87786.2| 1307|Caenorhabditis elegans Hypothetical pr... 32 0.30
M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-re... 32 0.30
AC024853-4|AAK68586.1| 746|Caenorhabditis elegans Hypothetical ... 31 0.53
AC024776-1|AAK68468.1| 338|Caenorhabditis elegans Hypothetical ... 31 0.53
Z83217-2|CAB05680.2| 319|Caenorhabditis elegans Hypothetical pr... 31 0.93
Z81479-1|CAB03944.1| 1043|Caenorhabditis elegans Hypothetical pr... 31 0.93
Z46791-5|CAA86755.2| 948|Caenorhabditis elegans Hypothetical pr... 31 0.93
AF025467-5|AAB71038.2| 1115|Caenorhabditis elegans Hypothetical ... 31 0.93
AF025467-4|AAN65300.1| 1130|Caenorhabditis elegans Hypothetical ... 31 0.93
AL117203-5|CAB55107.1| 291|Caenorhabditis elegans Hypothetical ... 30 1.2
Z70205-4|CAA94115.2| 528|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z70034-10|CAI79119.2| 560|Caenorhabditis elegans Hypothetical p... 29 2.8
Z70034-3|CAA93860.2| 620|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z70034-2|CAA93854.3| 623|Caenorhabditis elegans Hypothetical pr... 29 2.8
U97593-7|AAB52878.1| 591|Caenorhabditis elegans Prion-like-(q/n... 29 2.8
U97593-6|AAB52879.2| 925|Caenorhabditis elegans Prion-like-(q/n... 29 2.8
U97593-5|AAB52880.1| 1175|Caenorhabditis elegans Prion-like-(q/n... 29 2.8
U10401-4|AAN65289.1| 937|Caenorhabditis elegans Myc and mondo-l... 29 2.8
U10401-3|AAA19059.2| 1009|Caenorhabditis elegans Myc and mondo-l... 29 2.8
AF264757-1|AAK20949.1| 1009|Caenorhabditis elegans Mlx interacto... 29 2.8
Z74030-16|CAI79165.1| 481|Caenorhabditis elegans Hypothetical p... 29 3.7
Z74030-15|CAI79164.1| 477|Caenorhabditis elegans Hypothetical p... 29 3.7
Z74030-7|CAA98447.2| 559|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z74030-6|CAA98444.2| 508|Caenorhabditis elegans Hypothetical pr... 29 3.7
U80448-6|AAO12417.1| 687|Caenorhabditis elegans Hypothetical pr... 29 3.7
U80448-5|AAB37819.1| 975|Caenorhabditis elegans Hypothetical pr... 29 3.7
U40410-3|AAL27230.1| 1169|Caenorhabditis elegans Lin-12 and glp-... 29 3.7
U40410-2|AAL27229.1| 1876|Caenorhabditis elegans Lin-12 and glp-... 29 3.7
AF213473-1|AAL50027.1| 913|Caenorhabditis elegans basic helix-l... 29 3.7
AF003135-11|AAK18987.2| 1406|Caenorhabditis elegans Hypothetical... 29 3.7
AC024790-10|AAF60632.2| 129|Caenorhabditis elegans Hypothetical... 29 3.7
U15406-1|AAA50456.1| 2272|Caenorhabditis elegans gag, pol and en... 28 4.9
L23646-13|AAA28035.2| 2175|Caenorhabditis elegans C. elegans RET... 28 4.9
L23646-12|AAL02516.1| 2186|Caenorhabditis elegans C. elegans RET... 28 4.9
AC024813-2|ABE73329.1| 1027|Caenorhabditis elegans Est (ever sho... 28 4.9
AC024813-1|AAK27880.3| 1241|Caenorhabditis elegans Est (ever sho... 28 4.9
Z81056-1|CAB02902.1| 319|Caenorhabditis elegans Hypothetical pr... 28 6.5
Z68335-3|CAA92730.2| 540|Caenorhabditis elegans Hypothetical pr... 28 6.5
U80439-9|AAO38675.1| 661|Caenorhabditis elegans Hypothetical pr... 28 6.5
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 28 6.5
AC024824-3|AAK85501.1| 543|Caenorhabditis elegans Hypothetical ... 28 6.5
Z81592-8|CAB04730.1| 365|Caenorhabditis elegans Hypothetical pr... 27 8.6
Z80221-2|CAB02310.1| 405|Caenorhabditis elegans Hypothetical pr... 27 8.6
Z73912-8|CAA98148.1| 1016|Caenorhabditis elegans Hypothetical pr... 27 8.6
Z72517-7|CAA96698.1| 1016|Caenorhabditis elegans Hypothetical pr... 27 8.6
X54355-1|CAA38240.1| 382|Caenorhabditis elegans lin-11 protein ... 27 8.6
U23448-1|AAM81126.1| 1129|Caenorhabditis elegans Egg laying defe... 27 8.6
AF096618-1|AAD27790.1| 1129|Caenorhabditis elegans EGL-27 protein. 27 8.6
>AC024790-4|AAF60636.1| 121|Caenorhabditis elegans Hypothetical
protein Y47D7A.7 protein.
Length = 121
Score = 36.7 bits (81), Expect = 0.014
Identities = 24/70 (34%), Positives = 33/70 (47%), Gaps = 8/70 (11%)
Frame = +2
Query: 53 NFYYNTPPPPLRYPSNPATAIFTNAQTYNNAPGY--VPP------TTRDNKMDTSRSNST 208
N Y TP P PS P + A TY + P Y PP T+ DN+ DT ++T
Sbjct: 24 NSYPTTPSYPTPPPSYPTPKKYPVAPTYPSTPSYSAQPPPAPSAYTSSDNQEDTESESAT 83
Query: 209 NSVAIAPYNK 238
++ A + Y K
Sbjct: 84 SASATSEYRK 93
>AC024790-5|AAF60640.2| 119|Caenorhabditis elegans Hypothetical
protein Y47D7A.2 protein.
Length = 119
Score = 35.5 bits (78), Expect = 0.033
Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 6/68 (8%)
Frame = +2
Query: 53 NFYYNTPPPPLRYPSNPATAIFTNAQTYNNAPGY-VPP-----TTRDNKMDTSRSNSTNS 214
N Y TP P PS P + A TY + P Y PP ++ DN+ DT + T +
Sbjct: 24 NSYPTTPSYPTPPPSYPTPKKYPVAPTYPSTPSYSAPPAQSAYSSSDNQEDTESESVTGA 83
Query: 215 VAIAPYNK 238
+ + Y K
Sbjct: 84 ASTSEYRK 91
>Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical protein
F29D11.1 protein.
Length = 4753
Score = 32.3 bits (70), Expect = 0.30
Identities = 17/64 (26%), Positives = 32/64 (50%)
Frame = +2
Query: 65 NTPPPPLRYPSNPATAIFTNAQTYNNAPGYVPPTTRDNKMDTSRSNSTNSVAIAPYNKSK 244
++PPP PS A+A+ N + + A +VPPT ++++ + + + + SK
Sbjct: 4666 SSPPPSNDQPSTSASAMSPNRPSTSAASSFVPPTFDQDEIEL---KTADEIIVPKAEISK 4722
Query: 245 EPTP 256
P P
Sbjct: 4723 PPIP 4726
>Z47811-2|CAA87786.2| 1307|Caenorhabditis elegans Hypothetical
protein K02C4.3 protein.
Length = 1307
Score = 32.3 bits (70), Expect = 0.30
Identities = 24/81 (29%), Positives = 34/81 (41%)
Frame = +2
Query: 104 ATAIFTNAQTYNNAPGYVPPTTRDNKMDTSRSNSTNSVAIAPYNKSKEPTPTPANLFGTT 283
+T N+ PGY + + +S S Y KEP+ TP +LFGT
Sbjct: 341 STTTAPNSDIIGAPPGY---NAANLSLPSSSHVDPKSTLNPMYVNEKEPSSTPTSLFGTR 397
Query: 284 NVWILFKKLLDITGAMTCQNL 346
+ I + +D T A T NL
Sbjct: 398 SKTIEVNESMD-TEAATSSNL 417
>M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-related
protein protein.
Length = 4753
Score = 32.3 bits (70), Expect = 0.30
Identities = 17/64 (26%), Positives = 32/64 (50%)
Frame = +2
Query: 65 NTPPPPLRYPSNPATAIFTNAQTYNNAPGYVPPTTRDNKMDTSRSNSTNSVAIAPYNKSK 244
++PPP PS A+A+ N + + A +VPPT ++++ + + + + SK
Sbjct: 4666 SSPPPSNDQPSTSASAMSPNRPSTSAASSFVPPTFDQDEIEL---KTADEIIVPKAEISK 4722
Query: 245 EPTP 256
P P
Sbjct: 4723 PPIP 4726
>AC024853-4|AAK68586.1| 746|Caenorhabditis elegans Hypothetical
protein Y71F9AR.3 protein.
Length = 746
Score = 31.5 bits (68), Expect = 0.53
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Frame = +2
Query: 23 QIKSMTDERGNFYYNTPP--PPLRYPSNPATAIFTNAQTYNNAPGYVPPTTRDNKMDTSR 196
Q + + +F+ N P P R S P+++ F+N+ N PPTT D +TSR
Sbjct: 174 QAYDIVNHDADFFANELPSTPSEREASPPSSSQFSNSAAPNLPETKQPPTTTDQYSETSR 233
Query: 197 S 199
+
Sbjct: 234 T 234
>AC024776-1|AAK68468.1| 338|Caenorhabditis elegans Hypothetical
protein Y41D4B.18 protein.
Length = 338
Score = 31.5 bits (68), Expect = 0.53
Identities = 26/87 (29%), Positives = 38/87 (43%), Gaps = 6/87 (6%)
Frame = +2
Query: 41 DERGNFYYNTPPPPLRYPSNPATAIFTNAQTYNNAPG-YVPPTT-----RDNKMDTSRSN 202
D F N P LR +PA I + Y+NA YV P+ + + D +
Sbjct: 170 DANATFSNNLEPDTLRLHPDPAI-ISRVFEWYSNATNLYVTPSQGVYYIQYFRADLNEPT 228
Query: 203 STNSVAIAPYNKSKEPTPTPANLFGTT 283
+T++ AP + + TP P NL TT
Sbjct: 229 TTSTAYAAPSSTASTSTPAPTNLPTTT 255
>Z83217-2|CAB05680.2| 319|Caenorhabditis elegans Hypothetical
protein C10C6.3 protein.
Length = 319
Score = 30.7 bits (66), Expect = 0.93
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = +2
Query: 119 TNAQTYNNAPGYVPPTTRDNKMDTSRSNSTNSVAIAPYNKSKE 247
TN T + GYVPP ++ + N+VA+ P K K+
Sbjct: 151 TNVYT-GSREGYVPPPAKEGSGSGGKKKDMNNVAVKPDEKKKD 192
>Z81479-1|CAB03944.1| 1043|Caenorhabditis elegans Hypothetical
protein C34F6.1 protein.
Length = 1043
Score = 30.7 bits (66), Expect = 0.93
Identities = 24/80 (30%), Positives = 31/80 (38%), Gaps = 4/80 (5%)
Frame = +2
Query: 68 TPPP----PLRYPSNPATAIFTNAQTYNNAPGYVPPTTRDNKMDTSRSNSTNSVAIAPYN 235
TPPP P+ YP A T Q PPTT ++T ST S+A
Sbjct: 96 TPPPSTLPPITYPRPTVGAPITTQQVLITETTTQPPTT-TTTLETPAPESTPSMA----P 150
Query: 236 KSKEPTPTPANLFGTTNVWI 295
+PTP P T ++
Sbjct: 151 SHTDPTPAPETTVAPTTKYL 170
>Z46791-5|CAA86755.2| 948|Caenorhabditis elegans Hypothetical
protein C09G5.6 protein.
Length = 948
Score = 30.7 bits (66), Expect = 0.93
Identities = 18/83 (21%), Positives = 27/83 (32%)
Frame = +2
Query: 32 SMTDERGNFYYNTPPPPLRYPSNPATAIFTNAQTYNNAPGYVPPTTRDNKMDTSRSNSTN 211
S + R + Y PPP YP+NP Y P Y K S +
Sbjct: 187 SSPNNRTSLYNPQPPPKTGYPTNPRVPYNPPQPNYTRQPTYPEDNRAPYKPTRSPNTPPP 246
Query: 212 SVAIAPYNKSKEPTPTPANLFGT 280
Y+ + P+ ++ T
Sbjct: 247 RQPSGGYDSDGQTPPSSPRIYNT 269
>AF025467-5|AAB71038.2| 1115|Caenorhabditis elegans Hypothetical
protein R148.3a protein.
Length = 1115
Score = 30.7 bits (66), Expect = 0.93
Identities = 22/65 (33%), Positives = 28/65 (43%)
Frame = +2
Query: 68 TPPPPLRYPSNPATAIFTNAQTYNNAPGYVPPTTRDNKMDTSRSNSTNSVAIAPYNKSKE 247
TPPPP P PA A+ AQ AP P +T++ N+V AP +
Sbjct: 374 TPPPPAPPP--PAPAVPEEAQAPTPAPEEAPEA--QIPAETAQIPPENAVPEAPEEPAPT 429
Query: 248 PTPTP 262
TP P
Sbjct: 430 TTPPP 434
Score = 29.5 bits (63), Expect = 2.1
Identities = 24/71 (33%), Positives = 32/71 (45%), Gaps = 6/71 (8%)
Frame = +2
Query: 71 PPPPLRYPSNPAT--AIFTNAQTYNNAPGYVPPT-TRDNKMDTSRSNSTNSVAI---APY 232
P P +Y P T A NAP PT + D+ M + ++ NS +I AP
Sbjct: 286 PVPIAQYIQEPTTTPAPLEAPAPVENAPNLPTPTFSVDDLMAQAARDALNSNSIVPDAPK 345
Query: 233 NKSKEPTPTPA 265
+ EP PTPA
Sbjct: 346 VEEPEPAPTPA 356
>AF025467-4|AAN65300.1| 1130|Caenorhabditis elegans Hypothetical
protein R148.3b protein.
Length = 1130
Score = 30.7 bits (66), Expect = 0.93
Identities = 22/65 (33%), Positives = 28/65 (43%)
Frame = +2
Query: 68 TPPPPLRYPSNPATAIFTNAQTYNNAPGYVPPTTRDNKMDTSRSNSTNSVAIAPYNKSKE 247
TPPPP P PA A+ AQ AP P +T++ N+V AP +
Sbjct: 386 TPPPPAPPP--PAPAVPEEAQAPTPAPEEAPEA--QIPAETAQIPPENAVPEAPEEPAPT 441
Query: 248 PTPTP 262
TP P
Sbjct: 442 TTPPP 446
Score = 29.5 bits (63), Expect = 2.1
Identities = 24/71 (33%), Positives = 32/71 (45%), Gaps = 6/71 (8%)
Frame = +2
Query: 71 PPPPLRYPSNPAT--AIFTNAQTYNNAPGYVPPT-TRDNKMDTSRSNSTNSVAI---APY 232
P P +Y P T A NAP PT + D+ M + ++ NS +I AP
Sbjct: 286 PVPIAQYIQEPTTTPAPLEAPAPVENAPNLPTPTFSVDDLMAQAARDALNSNSIVPDAPK 345
Query: 233 NKSKEPTPTPA 265
+ EP PTPA
Sbjct: 346 VEEPEPAPTPA 356
>AL117203-5|CAB55107.1| 291|Caenorhabditis elegans Hypothetical
protein Y48C3A.8 protein.
Length = 291
Score = 30.3 bits (65), Expect = 1.2
Identities = 27/97 (27%), Positives = 41/97 (42%)
Frame = +2
Query: 20 VQIKSMTDERGNFYYNTPPPPLRYPSNPATAIFTNAQTYNNAPGYVPPTTRDNKMDTSRS 199
++ +++T G + PPPP P+ A A+ N +APG + T S
Sbjct: 150 MKTEALTPTGGGGGGSVPPPP---PAATA-AVSMNGGGPGSAPGSAHSVNNNVNPGTPGS 205
Query: 200 NSTNSVAIAPYNKSKEPTPTPANLFGTTNVWILFKKL 310
N ++ P S P P + FG N+ I F KL
Sbjct: 206 NPLSNPMSNPPLSSGPPPPGSNDAFG-KNLMIFFPKL 241
>Z70205-4|CAA94115.2| 528|Caenorhabditis elegans Hypothetical
protein C11H1.5 protein.
Length = 528
Score = 29.1 bits (62), Expect = 2.8
Identities = 15/57 (26%), Positives = 24/57 (42%)
Frame = +1
Query: 274 WYNKCVDFVQKIIRYYRCNDMSELSPLMIHFINTIRDMCIDTNPINVNVVKRFESEE 444
WY V Y RC+ M E+ L I F +D+C + + + E+E+
Sbjct: 471 WYRPRGSSVCVPYHYPRCSSMEEMEELPILFEQNCQDLCFSQHEKRIAPLFTLETED 527
>Z70034-10|CAI79119.2| 560|Caenorhabditis elegans Hypothetical
protein C18E9.3c protein.
Length = 560
Score = 29.1 bits (62), Expect = 2.8
Identities = 15/53 (28%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = +1
Query: 109 GHIHQRANLQQRARVRAAYDARQQNGHEPQQQHK--LGSDRTVQQEQRTDADA 261
G +H + N Q +++ QQ H+P QQH+ + QQ QR ++
Sbjct: 330 GQLHHQMNAGQLHQIQQQQQQCQQIQHQPPQQHQQVINGQVMNQQNQRNQVNS 382
>Z70034-3|CAA93860.2| 620|Caenorhabditis elegans Hypothetical
protein C18E9.3b protein.
Length = 620
Score = 29.1 bits (62), Expect = 2.8
Identities = 15/53 (28%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = +1
Query: 109 GHIHQRANLQQRARVRAAYDARQQNGHEPQQQHK--LGSDRTVQQEQRTDADA 261
G +H + N Q +++ QQ H+P QQH+ + QQ QR ++
Sbjct: 390 GQLHHQMNAGQLHQIQQQQQQCQQIQHQPPQQHQQVINGQVMNQQNQRNQVNS 442
>Z70034-2|CAA93854.3| 623|Caenorhabditis elegans Hypothetical
protein C18E9.3a protein.
Length = 623
Score = 29.1 bits (62), Expect = 2.8
Identities = 15/53 (28%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = +1
Query: 109 GHIHQRANLQQRARVRAAYDARQQNGHEPQQQHK--LGSDRTVQQEQRTDADA 261
G +H + N Q +++ QQ H+P QQH+ + QQ QR ++
Sbjct: 393 GQLHHQMNAGQLHQIQQQQQQCQQIQHQPPQQHQQVINGQVMNQQNQRNQVNS 445
>U97593-7|AAB52878.1| 591|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 22,
isoform b protein.
Length = 591
Score = 29.1 bits (62), Expect = 2.8
Identities = 17/56 (30%), Positives = 25/56 (44%)
Frame = +2
Query: 89 YPSNPATAIFTNAQTYNNAPGYVPPTTRDNKMDTSRSNSTNSVAIAPYNKSKEPTP 256
Y +N + + YN P Y PP N T+ +NS++S YN S + P
Sbjct: 68 YNTNQVDYVLGHKDKYNEGPHYQPPII--NSSATAANNSSSST--HHYNSSSQAIP 119
>U97593-6|AAB52879.2| 925|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 22,
isoform c protein.
Length = 925
Score = 29.1 bits (62), Expect = 2.8
Identities = 17/56 (30%), Positives = 25/56 (44%)
Frame = +2
Query: 89 YPSNPATAIFTNAQTYNNAPGYVPPTTRDNKMDTSRSNSTNSVAIAPYNKSKEPTP 256
Y +N + + YN P Y PP N T+ +NS++S YN S + P
Sbjct: 487 YNTNQVDYVLGHKDKYNEGPHYQPPII--NSSATAANNSSSST--HHYNSSSQAIP 538
>U97593-5|AAB52880.1| 1175|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 22,
isoform a protein.
Length = 1175
Score = 29.1 bits (62), Expect = 2.8
Identities = 17/56 (30%), Positives = 25/56 (44%)
Frame = +2
Query: 89 YPSNPATAIFTNAQTYNNAPGYVPPTTRDNKMDTSRSNSTNSVAIAPYNKSKEPTP 256
Y +N + + YN P Y PP N T+ +NS++S YN S + P
Sbjct: 652 YNTNQVDYVLGHKDKYNEGPHYQPPII--NSSATAANNSSSST--HHYNSSSQAIP 703
>U10401-4|AAN65289.1| 937|Caenorhabditis elegans Myc and mondo-like
protein 1, isoformb protein.
Length = 937
Score = 29.1 bits (62), Expect = 2.8
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = +2
Query: 137 NNAPGYVPPTTRDNKMDTSRSNSTNSVAIAPYNKSKEPTPTP 262
NN P VPP +R N + T N + + +S +PTP P
Sbjct: 488 NNQPPLVPPPSRSNLLPTQ-----NDPYLPQFLQSTQPTPQP 524
>U10401-3|AAA19059.2| 1009|Caenorhabditis elegans Myc and mondo-like
protein 1, isoforma protein.
Length = 1009
Score = 29.1 bits (62), Expect = 2.8
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = +2
Query: 137 NNAPGYVPPTTRDNKMDTSRSNSTNSVAIAPYNKSKEPTPTP 262
NN P VPP +R N + T N + + +S +PTP P
Sbjct: 488 NNQPPLVPPPSRSNLLPTQ-----NDPYLPQFLQSTQPTPQP 524
>AF264757-1|AAK20949.1| 1009|Caenorhabditis elegans Mlx interactor
protein.
Length = 1009
Score = 29.1 bits (62), Expect = 2.8
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = +2
Query: 137 NNAPGYVPPTTRDNKMDTSRSNSTNSVAIAPYNKSKEPTPTP 262
NN P VPP +R N + T N + + +S +PTP P
Sbjct: 488 NNQPPLVPPPSRSNLLPTQ-----NDPYLPQFLQSTQPTPQP 524
>Z74030-16|CAI79165.1| 481|Caenorhabditis elegans Hypothetical
protein D1054.9e protein.
Length = 481
Score = 28.7 bits (61), Expect = 3.7
Identities = 18/65 (27%), Positives = 27/65 (41%)
Frame = +2
Query: 92 PSNPATAIFTNAQTYNNAPGYVPPTTRDNKMDTSRSNSTNSVAIAPYNKSKEPTPTPANL 271
P P+T + T T AP TT KM S + +++ ++EPT PA
Sbjct: 125 PMTPSTVVPTTTTTTTQAP-----TTTTKKMPKSLKSIYSTIVAKTTTTTEEPTKAPATT 179
Query: 272 FGTTN 286
T+
Sbjct: 180 TQATS 184
>Z74030-15|CAI79164.1| 477|Caenorhabditis elegans Hypothetical
protein D1054.9d protein.
Length = 477
Score = 28.7 bits (61), Expect = 3.7
Identities = 18/65 (27%), Positives = 27/65 (41%)
Frame = +2
Query: 92 PSNPATAIFTNAQTYNNAPGYVPPTTRDNKMDTSRSNSTNSVAIAPYNKSKEPTPTPANL 271
P P+T + T T AP TT KM S + +++ ++EPT PA
Sbjct: 125 PMTPSTVVPTTTTTTTQAP-----TTTTKKMPKSLKSIYSTIVAKTTTTTEEPTKAPATT 179
Query: 272 FGTTN 286
T+
Sbjct: 180 TQATS 184
>Z74030-7|CAA98447.2| 559|Caenorhabditis elegans Hypothetical
protein D1054.9b protein.
Length = 559
Score = 28.7 bits (61), Expect = 3.7
Identities = 18/65 (27%), Positives = 27/65 (41%)
Frame = +2
Query: 92 PSNPATAIFTNAQTYNNAPGYVPPTTRDNKMDTSRSNSTNSVAIAPYNKSKEPTPTPANL 271
P P+T + T T AP TT KM S + +++ ++EPT PA
Sbjct: 125 PMTPSTVVPTTTTTTTQAP-----TTTTKKMPKSLKSIYSTIVAKTTTTTEEPTKAPATT 179
Query: 272 FGTTN 286
T+
Sbjct: 180 TQATS 184
>Z74030-6|CAA98444.2| 508|Caenorhabditis elegans Hypothetical
protein D1054.9a protein.
Length = 508
Score = 28.7 bits (61), Expect = 3.7
Identities = 18/65 (27%), Positives = 27/65 (41%)
Frame = +2
Query: 92 PSNPATAIFTNAQTYNNAPGYVPPTTRDNKMDTSRSNSTNSVAIAPYNKSKEPTPTPANL 271
P P+T + T T AP TT KM S + +++ ++EPT PA
Sbjct: 125 PMTPSTVVPTTTTTTTQAP-----TTTTKKMPKSLKSIYSTIVAKTTTTTEEPTKAPATT 179
Query: 272 FGTTN 286
T+
Sbjct: 180 TQATS 184
>U80448-6|AAO12417.1| 687|Caenorhabditis elegans Hypothetical
protein F59A3.2b protein.
Length = 687
Score = 28.7 bits (61), Expect = 3.7
Identities = 19/64 (29%), Positives = 27/64 (42%), Gaps = 2/64 (3%)
Frame = +2
Query: 74 PPPLRYPSNPATAIFTNAQTYNNAPGYVPPTTRDNK--MDTSRSNSTNSVAIAPYNKSKE 247
PPP Y S+P A+F Y P +P T N+ D S + S ++K+
Sbjct: 555 PPPQIY-SSPGQALFNPTNLYPTPPSSLPNTYVPNQESFDESVNRDKKSFIFNNHSKANF 613
Query: 248 PTPT 259
PT
Sbjct: 614 SNPT 617
>U80448-5|AAB37819.1| 975|Caenorhabditis elegans Hypothetical
protein F59A3.2a protein.
Length = 975
Score = 28.7 bits (61), Expect = 3.7
Identities = 19/64 (29%), Positives = 27/64 (42%), Gaps = 2/64 (3%)
Frame = +2
Query: 74 PPPLRYPSNPATAIFTNAQTYNNAPGYVPPTTRDNK--MDTSRSNSTNSVAIAPYNKSKE 247
PPP Y S+P A+F Y P +P T N+ D S + S ++K+
Sbjct: 555 PPPQIY-SSPGQALFNPTNLYPTPPSSLPNTYVPNQESFDESVNRDKKSFIFNNHSKANF 613
Query: 248 PTPT 259
PT
Sbjct: 614 SNPT 617
>U40410-3|AAL27230.1| 1169|Caenorhabditis elegans Lin-12 and glp-1
x-hybridizingprotein 1, isoform b protein.
Length = 1169
Score = 28.7 bits (61), Expect = 3.7
Identities = 14/43 (32%), Positives = 19/43 (44%)
Frame = +2
Query: 56 FYYNTPPPPLRYPSNPATAIFTNAQTYNNAPGYVPPTTRDNKM 184
F+ T PP Y + PAT F Q Y P + + N+M
Sbjct: 389 FFQTTRPPMPTYATTPATTQFIPKQIYTTPPQMPKNSIKINQM 431
>U40410-2|AAL27229.1| 1876|Caenorhabditis elegans Lin-12 and glp-1
x-hybridizingprotein 1, isoform a protein.
Length = 1876
Score = 28.7 bits (61), Expect = 3.7
Identities = 14/43 (32%), Positives = 19/43 (44%)
Frame = +2
Query: 56 FYYNTPPPPLRYPSNPATAIFTNAQTYNNAPGYVPPTTRDNKM 184
F+ T PP Y + PAT F Q Y P + + N+M
Sbjct: 486 FFQTTRPPMPTYATTPATTQFIPKQIYTTPPQMPKNSIKINQM 528
>AF213473-1|AAL50027.1| 913|Caenorhabditis elegans basic
helix-loop-helix leucinezipper WBSCR14-like protein
protein.
Length = 913
Score = 28.7 bits (61), Expect = 3.7
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = +2
Query: 137 NNAPGYVPPTTRDNKMDTSRSNSTNSVAIAPYNKSKEPTPTP 262
NN P VPP +R N + T N + + +S +PTP P
Sbjct: 392 NNQPPLVPPPSRSNLLPTQ-----NDPYLPQFLQSTQPTPHP 428
>AF003135-11|AAK18987.2| 1406|Caenorhabditis elegans Hypothetical
protein W03F11.4 protein.
Length = 1406
Score = 28.7 bits (61), Expect = 3.7
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = +2
Query: 74 PPPLRYPSNPATAIFTNAQTYNNAPGYVPPTTRDNKMDTSRS 199
PPP P + A ++ NAP P TT ++ ++S S
Sbjct: 833 PPPAPQPPSSAASLTPAPSAAQNAPSIAPSTTEASEEESSGS 874
>AC024790-10|AAF60632.2| 129|Caenorhabditis elegans Hypothetical
protein Y47D7A.11 protein.
Length = 129
Score = 28.7 bits (61), Expect = 3.7
Identities = 17/54 (31%), Positives = 21/54 (38%), Gaps = 1/54 (1%)
Frame = +2
Query: 62 YNTPPPPLRYPSN-PATAIFTNAQTYNNAPGYVPPTTRDNKMDTSRSNSTNSVA 220
Y TPPP P P + + Y P Y P + +S S S N VA
Sbjct: 32 YPTPPPSYPTPKKYPVAPTYPSPPAYAQKPSYSAPPPPAPSVYSSSSFSDNEVA 85
>U15406-1|AAA50456.1| 2272|Caenorhabditis elegans gag, pol and env
protein precursor protein.
Length = 2272
Score = 28.3 bits (60), Expect = 4.9
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = +2
Query: 116 FTNAQTYNNAPGYVPPTTRDNKMDTSRSNSTNSVAIAPYNKSKE 247
F N T NN + P DN ++ +NS N+ A A N S+E
Sbjct: 570 FVNQNTQNNFKPFSPNKAADNSRNSWNNNSQNNSA-ASQNISRE 612
>L23646-13|AAA28035.2| 2175|Caenorhabditis elegans C. elegans RETR-1
protein, isoforma protein.
Length = 2175
Score = 28.3 bits (60), Expect = 4.9
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = +2
Query: 116 FTNAQTYNNAPGYVPPTTRDNKMDTSRSNSTNSVAIAPYNKSKE 247
F N T NN + P DN ++ +NS N+ A A N S+E
Sbjct: 473 FVNQNTQNNFKPFSPNKAADNSRNSWNNNSQNNSA-ASQNISRE 515
>L23646-12|AAL02516.1| 2186|Caenorhabditis elegans C. elegans RETR-1
protein, isoformb protein.
Length = 2186
Score = 28.3 bits (60), Expect = 4.9
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = +2
Query: 116 FTNAQTYNNAPGYVPPTTRDNKMDTSRSNSTNSVAIAPYNKSKE 247
F N T NN + P DN ++ +NS N+ A A N S+E
Sbjct: 484 FVNQNTQNNFKPFSPNKAADNSRNSWNNNSQNNSA-ASQNISRE 526
>AC024813-2|ABE73329.1| 1027|Caenorhabditis elegans Est (ever
shorter telomeres) homologprotein 1, isoform c protein.
Length = 1027
Score = 28.3 bits (60), Expect = 4.9
Identities = 13/51 (25%), Positives = 22/51 (43%)
Frame = +2
Query: 158 PPTTRDNKMDTSRSNSTNSVAIAPYNKSKEPTPTPANLFGTTNVWILFKKL 310
PP + + ++ +A + K EP PTP +TN+ +KL
Sbjct: 807 PPNLESEAENPENVTTPEAILLASFFKIYEPNPTPVRCSRSTNISQAVEKL 857
>AC024813-1|AAK27880.3| 1241|Caenorhabditis elegans Est (ever shorter
telomeres) homologprotein 1, isoform a protein.
Length = 1241
Score = 28.3 bits (60), Expect = 4.9
Identities = 13/51 (25%), Positives = 22/51 (43%)
Frame = +2
Query: 158 PPTTRDNKMDTSRSNSTNSVAIAPYNKSKEPTPTPANLFGTTNVWILFKKL 310
PP + + ++ +A + K EP PTP +TN+ +KL
Sbjct: 964 PPNLESEAENPENVTTPEAILLASFFKIYEPNPTPVRCSRSTNISQAVEKL 1014
>Z81056-1|CAB02902.1| 319|Caenorhabditis elegans Hypothetical
protein F09F3.1 protein.
Length = 319
Score = 27.9 bits (59), Expect = 6.5
Identities = 11/39 (28%), Positives = 18/39 (46%)
Frame = +1
Query: 286 CVDFVQKIIRYYRCNDMSELSPLMIHFINTIRDMCIDTN 402
C + YY M +SPL + +NT+ +C+ N
Sbjct: 80 CATLTFSQVNYYLNRTMGMVSPLWSYILNTLIPICLSCN 118
>Z68335-3|CAA92730.2| 540|Caenorhabditis elegans Hypothetical
protein C29F4.2 protein.
Length = 540
Score = 27.9 bits (59), Expect = 6.5
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = +1
Query: 406 INVNVVKRFESEETMIRHLIRLQKELGQGNAAESR 510
I++ V KRF + ETM+ I EL + N ESR
Sbjct: 143 IHIGVRKRFPTLETMVAAGIMTSSELKKYNEVESR 177
>U80439-9|AAO38675.1| 661|Caenorhabditis elegans Hypothetical
protein C01G8.9b protein.
Length = 661
Score = 27.9 bits (59), Expect = 6.5
Identities = 17/38 (44%), Positives = 19/38 (50%)
Frame = +2
Query: 149 GYVPPTTRDNKMDTSRSNSTNSVAIAPYNKSKEPTPTP 262
GY P T D + S STNS A AP KS +P P
Sbjct: 501 GYQPSQTDDKE-----STSTNSDAAAPPQKSTSSSPKP 533
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical protein
C01G8.9a protein.
Length = 1724
Score = 27.9 bits (59), Expect = 6.5
Identities = 17/38 (44%), Positives = 19/38 (50%)
Frame = +2
Query: 149 GYVPPTTRDNKMDTSRSNSTNSVAIAPYNKSKEPTPTP 262
GY P T D + S STNS A AP KS +P P
Sbjct: 1564 GYQPSQTDDKE-----STSTNSDAAAPPQKSTSSSPKP 1596
>AC024824-3|AAK85501.1| 543|Caenorhabditis elegans Hypothetical
protein Y55B1BR.1 protein.
Length = 543
Score = 27.9 bits (59), Expect = 6.5
Identities = 12/38 (31%), Positives = 22/38 (57%)
Frame = +2
Query: 89 YPSNPATAIFTNAQTYNNAPGYVPPTTRDNKMDTSRSN 202
+PS +T ++ ++ Y+PP TRD ++ SR+N
Sbjct: 466 FPSLVSTG--NTVESSEDSDTYIPPPTRDQNIERSRNN 501
>Z81592-8|CAB04730.1| 365|Caenorhabditis elegans Hypothetical
protein T16G1.8 protein.
Length = 365
Score = 27.5 bits (58), Expect = 8.6
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +2
Query: 62 YNTPPPPLRYPSNPATAIFTNAQTYNNAPGYVPP 163
Y+ PPPL PS+P+ +A +Y+ P P
Sbjct: 103 YSMAPPPLILPSSPSYVAPVSAPSYSLTPSISIP 136
>Z80221-2|CAB02310.1| 405|Caenorhabditis elegans Hypothetical
protein ZC247.3 protein.
Length = 405
Score = 27.5 bits (58), Expect = 8.6
Identities = 16/54 (29%), Positives = 22/54 (40%)
Frame = +2
Query: 17 RVQIKSMTDERGNFYYNTPPPPLRYPSNPATAIFTNAQTYNNAPGYVPPTTRDN 178
R I M FY PP +++ +P T N +T AP + PT N
Sbjct: 315 RDDIVDMFPNDQQFYPPPPPSNVQFFCDPYTTSPNNPETIQMAPQFAVPTENMN 368
>Z73912-8|CAA98148.1| 1016|Caenorhabditis elegans Hypothetical
protein ZK524.4 protein.
Length = 1016
Score = 27.5 bits (58), Expect = 8.6
Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = -3
Query: 628 ASAKASLPNISAPTVVKFLRVRRQRI*HKRCPEIYS-NRSAGTRPRCLVP 482
ASAK L S+P+V F + R R+ + E+ NR G R R P
Sbjct: 552 ASAKRLLRRNSSPSVSMFSGITRDRVSPQAVQELLDLNRLGGVRGRAASP 601
>Z72517-7|CAA96698.1| 1016|Caenorhabditis elegans Hypothetical
protein ZK524.4 protein.
Length = 1016
Score = 27.5 bits (58), Expect = 8.6
Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = -3
Query: 628 ASAKASLPNISAPTVVKFLRVRRQRI*HKRCPEIYS-NRSAGTRPRCLVP 482
ASAK L S+P+V F + R R+ + E+ NR G R R P
Sbjct: 552 ASAKRLLRRNSSPSVSMFSGITRDRVSPQAVQELLDLNRLGGVRGRAASP 601
>X54355-1|CAA38240.1| 382|Caenorhabditis elegans lin-11 protein
protein.
Length = 382
Score = 27.5 bits (58), Expect = 8.6
Identities = 16/54 (29%), Positives = 22/54 (40%)
Frame = +2
Query: 17 RVQIKSMTDERGNFYYNTPPPPLRYPSNPATAIFTNAQTYNNAPGYVPPTTRDN 178
R I M FY PP +++ +P T N +T AP + PT N
Sbjct: 292 RDDIVDMFPNDQQFYPPPPPSNVQFFCDPYTTSPNNPETIQMAPQFAVPTENMN 345
>U23448-1|AAM81126.1| 1129|Caenorhabditis elegans Egg laying defective
protein 27,isoform a protein.
Length = 1129
Score = 27.5 bits (58), Expect = 8.6
Identities = 23/78 (29%), Positives = 36/78 (46%), Gaps = 8/78 (10%)
Frame = +1
Query: 52 QFLLQHPSAAAEVSL*SGNGHIHQR---ANLQQRARVRAAY-----DARQQNGHEPQQQH 207
Q LQ A +V H HQ+ A QQ+ R AA + R+Q E ++QH
Sbjct: 873 QMALQQQLEAHQVQFQLMMAHQHQQKMIAEQQQQQRHAAAQQLREREQREQRERERERQH 932
Query: 208 KLGSDRTVQQEQRTDADA 261
+ + + + Q+Q+ A A
Sbjct: 933 QQQAQQALHQQQQQHAAA 950
>AF096618-1|AAD27790.1| 1129|Caenorhabditis elegans EGL-27 protein.
Length = 1129
Score = 27.5 bits (58), Expect = 8.6
Identities = 23/78 (29%), Positives = 36/78 (46%), Gaps = 8/78 (10%)
Frame = +1
Query: 52 QFLLQHPSAAAEVSL*SGNGHIHQR---ANLQQRARVRAAY-----DARQQNGHEPQQQH 207
Q LQ A +V H HQ+ A QQ+ R AA + R+Q E ++QH
Sbjct: 873 QMALQQQLEAHQVQFQLMMAHQHQQKMIAEQQQQQRHAAAQQLREREQREQRERERERQH 932
Query: 208 KLGSDRTVQQEQRTDADA 261
+ + + + Q+Q+ A A
Sbjct: 933 QQQAQQALHQQQQQHAAA 950
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,978,098
Number of Sequences: 27780
Number of extensions: 300749
Number of successful extensions: 1374
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 1218
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1369
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1427403330
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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