Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120845.seq
(692 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P17500 Cluster: Major capsid protein; n=15; Nucleopolyh... 114 2e-24
UniRef50_Q0N423 Cluster: VP39; n=1; Clanis bilineata nucleopolyh... 80 4e-14
UniRef50_Q8QLD5 Cluster: Vp39 capsid; n=1; Mamestra configurata ... 79 8e-14
UniRef50_P35840 Cluster: Major capsid protein; n=12; Nucleopolyh... 78 2e-13
UniRef50_Q80LM9 Cluster: Major capsid protein VP39; n=1; Adoxoph... 69 1e-10
UniRef50_Q9DWZ8 Cluster: VP39; n=2; Nucleopolyhedrovirus|Rep: VP... 62 2e-08
UniRef50_Q6QXM6 Cluster: ORF086; n=1; Agrotis segetum granulovir... 49 1e-04
UniRef50_Q0ZNY8 Cluster: Major viral capsid protein 39; n=3; Nuc... 48 2e-04
UniRef50_Q9DVV4 Cluster: PxORF79 peptide; n=1; Plutella xylostel... 46 7e-04
UniRef50_Q7T9T4 Cluster: Vp39-capsid; n=5; Granulovirus|Rep: Vp3... 46 7e-04
UniRef50_Q9PYT2 Cluster: ORF111; n=4; Granulovirus|Rep: ORF111 -... 44 0.005
UniRef50_Q8JRX1 Cluster: Capsid protein VP39; n=1; Phthorimaea o... 36 0.71
UniRef50_A4KXH1 Cluster: AV-like serine/threonine protein kinase... 36 1.2
UniRef50_A5FEP2 Cluster: TonB-dependent receptor, plug; n=1; Fla... 34 2.9
UniRef50_UPI00015B5CC8 Cluster: PREDICTED: similar to neuralized... 34 3.8
UniRef50_UPI00015B542A Cluster: PREDICTED: similar to myosin-rho... 33 5.0
UniRef50_Q8XIR0 Cluster: Cation-transporting ATPase; n=12; Clost... 33 6.6
UniRef50_Q20779 Cluster: Probable cytochrome c oxidase polypepti... 33 6.6
>UniRef50_P17500 Cluster: Major capsid protein; n=15;
Nucleopolyhedrovirus|Rep: Major capsid protein - Orgyia
pseudotsugata multicapsid polyhedrosis virus (OpMNPV)
Length = 351
Score = 114 bits (275), Expect = 2e-24
Identities = 56/92 (60%), Positives = 67/92 (72%), Gaps = 4/92 (4%)
Frame = +3
Query: 252 FDEDDNQFKMTIARHLVGNKERGIKRILIPSATNYQEVFNLNSMMQAEQLIFHLIYNNEE 431
+DEDDNQ+K TIARHLVG+KERG+KRIL+P+ NY VFNL MM AEQLIFHLIY+N
Sbjct: 66 YDEDDNQYKRTIARHLVGHKERGVKRILVPTRANYMTVFNLPGMMLAEQLIFHLIYDNRL 125
Query: 432 AVNVICXNLKYTEVFTSGT----QRLYTALRN 515
VN IC +LK E F T + +Y+A RN
Sbjct: 126 EVNRICASLKNNENFIDNTYSVVESVYSATRN 157
Score = 102 bits (244), Expect = 1e-20
Identities = 71/186 (38%), Positives = 97/186 (52%), Gaps = 6/186 (3%)
Frame = +1
Query: 55 MALMPVGMAPRQMRVNRCIFASIVSFDACITYKSPCSPXAYHDDGWFICNSHLIKRFKMS 234
MAL+ G++ R+ N CIF +I FD+C+TY+SPCS A DDGWFIC+ HL RFKMS
Sbjct: 1 MALVSPGVSSRRS-TNHCIFGAIEPFDSCVTYRSPCSSDASVDDGWFICDYHLKLRFKMS 59
Query: 235 KMVLPILTKTTINSK*RSLGI*LEIKKEVSSEF*FQAQPITKRCLI*TV*CKPN---N*S 405
KMVLPI + N R++ L KE + + R TV P
Sbjct: 60 KMVLPIYDEDD-NQYKRTIARHLVGHKERG----VKRILVPTRANYMTVFNLPGMMLAEQ 114
Query: 406 FI*YITTKRRL---TLYAXI*NIPKFSQAARNGYTQRYATTRSILDTTNPNTFCSRVSRD 576
I ++ RL + A + N F + Y+ TR+IL T+P +CSRV+ D
Sbjct: 115 LIFHLIYDNRLEVNRICASLKNNENFIDNTYSVVESVYSATRNILSLTDPQAYCSRVAND 174
Query: 577 ELRFFD 594
++RFFD
Sbjct: 175 DVRFFD 180
Score = 35.9 bits (79), Expect = 0.94
Identities = 16/21 (76%), Positives = 17/21 (80%)
Frame = +2
Query: 629 GDQXFNNYSGFLQNLIRRAVA 691
GD FNN GFL+NLIRRAVA
Sbjct: 193 GDTVFNNMPGFLRNLIRRAVA 213
>UniRef50_Q0N423 Cluster: VP39; n=1; Clanis bilineata
nucleopolyhedrosis virus|Rep: VP39 - Clanis bilineata
nucleopolyhedrosis virus
Length = 350
Score = 80.2 bits (189), Expect = 4e-14
Identities = 38/66 (57%), Positives = 46/66 (69%)
Frame = +1
Query: 55 MALMPVGMAPRQMRVNRCIFASIVSFDACITYKSPCSPXAYHDDGWFICNSHLIKRFKMS 234
MAL+ GMA ++ N CIF S+ FDAC Y+SPCS A ++DGW IC+ HL RFKM
Sbjct: 1 MALVVSGMATGRIN-NYCIFGSVQPFDACGPYRSPCSDDAKNNDGWLICDYHLSTRFKME 59
Query: 235 KMVLPI 252
KMVLPI
Sbjct: 60 KMVLPI 65
Score = 66.1 bits (154), Expect = 8e-10
Identities = 32/81 (39%), Positives = 47/81 (58%)
Frame = +3
Query: 255 DEDDNQFKMTIARHLVGNKERGIKRILIPSATNYQEVFNLNSMMQAEQLIFHLIYNNEEA 434
D D T+AR LV +K G +RIL+P+ NY V N+ ++ AEQ IFH+IY N+
Sbjct: 67 DADGTALNRTLARSLVNHKAIGDERILVPTKRNYMSVLNILALQLAEQYIFHIIYENDVE 126
Query: 435 VNVICXNLKYTEVFTSGTQRL 497
IC L+ +E F + T ++
Sbjct: 127 RERICQMLEISERFENDTYKV 147
>UniRef50_Q8QLD5 Cluster: Vp39 capsid; n=1; Mamestra configurata
NPV-A|Rep: Vp39 capsid - Mamestra configurata NPV-A
Length = 325
Score = 79.4 bits (187), Expect = 8e-14
Identities = 38/66 (57%), Positives = 42/66 (63%)
Frame = +1
Query: 55 MALMPVGMAPRQMRVNRCIFASIVSFDACITYKSPCSPXAYHDDGWFICNSHLIKRFKMS 234
MAL P G Q + N CIF +I FD C TY SPCS A +DGWFIC HL RF+M
Sbjct: 1 MALTPYGS--NQPQSNNCIFGAIRPFDTCRTYSSPCSNDASQEDGWFICEYHLSIRFRME 58
Query: 235 KMVLPI 252
KMVLPI
Sbjct: 59 KMVLPI 64
Score = 62.1 bits (144), Expect = 1e-08
Identities = 31/87 (35%), Positives = 48/87 (55%)
Frame = +3
Query: 255 DEDDNQFKMTIARHLVGNKERGIKRILIPSATNYQEVFNLNSMMQAEQLIFHLIYNNEEA 434
D + + ++ + L+ E R+LIP+ TNY++V L SM EQLIFH+IY+ +
Sbjct: 66 DAEGTIYNRSVGKSLISGTESN--RVLIPTKTNYEDVLKLPSMSLPEQLIFHMIYDEPDK 123
Query: 435 VNVICXNLKYTEVFTSGTQRLYTALRN 515
N IC L+Y E F S ++ + N
Sbjct: 124 QNEICKLLQYNENFHSDLYKVVERVYN 150
>UniRef50_P35840 Cluster: Major capsid protein; n=12;
Nucleopolyhedrovirus|Rep: Major capsid protein -
Lymantria dispar multicapsid nuclear polyhedrosis virus
(LdMNPV)
Length = 356
Score = 77.8 bits (183), Expect = 2e-13
Identities = 36/81 (44%), Positives = 51/81 (62%)
Frame = +3
Query: 255 DEDDNQFKMTIARHLVGNKERGIKRILIPSATNYQEVFNLNSMMQAEQLIFHLIYNNEEA 434
D + N + T+ + LV +K G R+LIP+ NY+ V NLNSM AEQL+ H+IY+N EA
Sbjct: 67 DAEGNIYNRTVGKSLVNHKTLGAARVLIPTRDNYKTVLNLNSMSLAEQLVTHMIYDNVEA 126
Query: 435 VNVICXNLKYTEVFTSGTQRL 497
+C L++ E F + T RL
Sbjct: 127 QGAVCKALQHNENFQTETYRL 147
Score = 73.3 bits (172), Expect = 5e-12
Identities = 32/66 (48%), Positives = 45/66 (68%)
Frame = +1
Query: 55 MALMPVGMAPRQMRVNRCIFASIVSFDACITYKSPCSPXAYHDDGWFICNSHLIKRFKMS 234
MAL+ ++ ++R N C+F ++ FD C Y SPCSP + ++DGWFIC+ H RFK+
Sbjct: 1 MALVSGALSTNRLR-NYCVFGAVQPFDNCRAYGSPCSPDSTNNDGWFICDYHSSIRFKIE 59
Query: 235 KMVLPI 252
KMVLPI
Sbjct: 60 KMVLPI 65
>UniRef50_Q80LM9 Cluster: Major capsid protein VP39; n=1; Adoxophyes
honmai NPV|Rep: Major capsid protein VP39 - Adoxophyes
honmai nucleopolyhedrovirus
Length = 312
Score = 68.9 bits (161), Expect = 1e-10
Identities = 35/86 (40%), Positives = 47/86 (54%), Gaps = 3/86 (3%)
Frame = +3
Query: 255 DEDDNQFKMTIARHLVGNKERGIKRILIPSATNYQEVFNLNSMMQAEQLIFHLIYNNEEA 434
D D+ T+ R LV + E G RIL+P+ NY+ V N+ + AE LI H+IY N E
Sbjct: 67 DADNKVLFRTVGRSLVKHTEEGTARILVPNKNNYESVLNVQDLPLAEALIIHMIYENLEK 126
Query: 435 VNVICXNLKYTEVFT---SGTQRLYT 503
IC LK+TE F Q+LY+
Sbjct: 127 QKEICERLKFTEHFADRYKNVQKLYS 152
Score = 68.5 bits (160), Expect = 1e-10
Identities = 32/66 (48%), Positives = 39/66 (59%)
Frame = +1
Query: 55 MALMPVGMAPRQMRVNRCIFASIVSFDACITYKSPCSPXAYHDDGWFICNSHLIKRFKMS 234
MAL+P G+ + N CIFA + SFDAC Y + CS A +DGW+IC H FKM
Sbjct: 1 MALVPAGLTSSRSNSN-CIFAGVQSFDACYRYPNECSKDADSNDGWYICEYHASVHFKME 59
Query: 235 KMVLPI 252
KM L I
Sbjct: 60 KMSLAI 65
>UniRef50_Q9DWZ8 Cluster: VP39; n=2; Nucleopolyhedrovirus|Rep: VP39
- Spodoptera litura multicapsid nucleopolyhedrovirus
(SpltMNPV)
Length = 302
Score = 61.7 bits (143), Expect = 2e-08
Identities = 33/92 (35%), Positives = 46/92 (50%)
Frame = +3
Query: 234 KNGFAHFDEDDNQFKMTIARHLVGNKERGIKRILIPSATNYQEVFNLNSMMQAEQLIFHL 413
K A D + + + LV + R RILIP+ NYQ V N++ + AE+L+ HL
Sbjct: 62 KTSIAIPDGTGQKLYRIVGKSLVSHNARANDRILIPTQENYQAVMNVSMLPPAERLVLHL 121
Query: 414 IYNNEEAVNVICXNLKYTEVFTSGTQRLYTAL 509
IYNN A IC L+ E F S T++
Sbjct: 122 IYNNRTAAAEICNQLRQQENFRSDVVENVTSM 153
Score = 54.4 bits (125), Expect = 3e-06
Identities = 28/68 (41%), Positives = 40/68 (58%), Gaps = 2/68 (2%)
Frame = +1
Query: 55 MALMPVGMAPRQMRVNRCIFASI--VSFDACITYKSPCSPXAYHDDGWFICNSHLIKRFK 228
MAL+ G A +M+ N CIF + + F+ C Y+SPCS A +DG F+C HL + FK
Sbjct: 1 MALVSGGNANSRMK-NYCIFQGVRPIEFNQCSNYRSPCSDDASQNDGVFMCQYHLSRFFK 59
Query: 229 MSKMVLPI 252
+ K + I
Sbjct: 60 IEKTSIAI 67
>UniRef50_Q6QXM6 Cluster: ORF086; n=1; Agrotis segetum
granulovirus|Rep: ORF086 - Agrotis segetum granulosis
virus (AsGV) (Agrotis segetumgranulovirus)
Length = 292
Score = 48.8 bits (111), Expect = 1e-04
Identities = 26/53 (49%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Frame = +1
Query: 100 NRCIFASIV--SFDACITYKSPCSPXAYHDDGWFICNSHLIKRFKMSKMVLPI 252
N CIF + F C Y+ PC Y+DDG FIC HL K FKM KMV+ I
Sbjct: 12 NLCIFQGVQPPEFLNCRPYEPPCIQP-YNDDGTFICQYHLAKYFKMEKMVVRI 63
>UniRef50_Q0ZNY8 Cluster: Major viral capsid protein 39; n=3;
Nucleopolyhedrovirus|Rep: Major viral capsid protein 39
- Neodiprion abietis nucleopolyhedrovirus
Length = 315
Score = 48.4 bits (110), Expect = 2e-04
Identities = 16/45 (35%), Positives = 33/45 (73%)
Frame = +3
Query: 327 RILIPSATNYQEVFNLNSMMQAEQLIFHLIYNNEEAVNVICXNLK 461
R+++P+ NY+++F + + + QL+FHL+Y N+ A++ IC ++K
Sbjct: 104 RVIVPTRRNYEDIFKVAYLPISYQLVFHLLYQNQSAIDKICQDVK 148
>UniRef50_Q9DVV4 Cluster: PxORF79 peptide; n=1; Plutella xylostella
granulovirus|Rep: PxORF79 peptide - Plutella xylostella
granulovirus
Length = 320
Score = 46.4 bits (105), Expect = 7e-04
Identities = 29/71 (40%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Frame = +1
Query: 76 MAPRQMRV-NRCIFASIVSFDA--CITYKSPCSPXAYHDDGWFICNSHLIKRFKMSKMVL 246
M+ RQ RV N CIF ++ ++ C CS A +DDG FICN HL F + KM L
Sbjct: 2 MSLRQNRVYNNCIFQAVSYSNSSLCADPVLHCSKDASNDDGTFICNHHLSMYFPLEKMTL 61
Query: 247 PILTKTTINSK 279
I + T + K
Sbjct: 62 EIPSGTGTSFK 72
Score = 38.3 bits (85), Expect = 0.18
Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 5/74 (6%)
Frame = +3
Query: 273 FKMTIARHLVGNKERGIKRILIPSATNYQEVFNLNSMMQAEQLIFHLIYNNEEA-----V 437
FK+ I + LV ++ + I+IPS NY + +N+M AE+ I + IY +
Sbjct: 71 FKLLIGKSLV--QQDATRNIIIPSKANYIDYLRVNNMSPAEKFIMYSIYGESATEPTGLI 128
Query: 438 NVICXNLKYTEVFT 479
+C +L+ + +T
Sbjct: 129 TQLCESLRSQDFYT 142
>UniRef50_Q7T9T4 Cluster: Vp39-capsid; n=5; Granulovirus|Rep:
Vp39-capsid - Adoxophyes orana granulovirus (AoGV)
Length = 291
Score = 46.4 bits (105), Expect = 7e-04
Identities = 26/62 (41%), Positives = 34/62 (54%), Gaps = 6/62 (9%)
Frame = +1
Query: 70 VGMAPRQMRVNRCIFASIVS----FDACITYKSPCSPXAYHD--DGWFICNSHLIKRFKM 231
+ + P ++ N CIF +V + C Y SPCSP A + DG FICN HL K FK+
Sbjct: 4 INVGPCELN-NYCIFQGVVGMMPDYYRCENYSSPCSPDASNSNLDGTFICNYHLNKYFKI 62
Query: 232 SK 237
K
Sbjct: 63 LK 64
>UniRef50_Q9PYT2 Cluster: ORF111; n=4; Granulovirus|Rep: ORF111 -
Xestia c-nigrum granulosis virus (XnGV) (Xestia
c-nigrumgranulovirus)
Length = 329
Score = 43.6 bits (98), Expect = 0.005
Identities = 21/53 (39%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Frame = +1
Query: 100 NRCIFASIV--SFDACITYKSPCSPXAYHDDGWFICNSHLIKRFKMSKMVLPI 252
N CIF + F C Y PCS + DG F+C+ HL + FK+ K V I
Sbjct: 16 NLCIFQGVQPPEFMNCGIYTPPCSDDCVNKDGTFVCSYHLARYFKLKKEVFEI 68
Score = 35.1 bits (77), Expect = 1.6
Identities = 16/59 (27%), Positives = 28/59 (47%)
Frame = +3
Query: 261 DDNQFKMTIARHLVGNKERGIKRILIPSATNYQEVFNLNSMMQAEQLIFHLIYNNEEAV 437
++ FK + L+ RI IP+ NY N+ +M E+ +F+ IY+ + V
Sbjct: 73 NNTSFKYLVGVSLIQQNVPTANRITIPAKDNYYSYLNVANMSSMEKYVFYSIYDEPDTV 131
>UniRef50_Q8JRX1 Cluster: Capsid protein VP39; n=1; Phthorimaea
operculella granulovirus|Rep: Capsid protein VP39 -
Phthorimaea operculella granulovirus
Length = 293
Score = 36.3 bits (80), Expect = 0.71
Identities = 22/49 (44%), Positives = 26/49 (53%), Gaps = 3/49 (6%)
Frame = +1
Query: 100 NRCIFASI-VSFDACITYKSPCSPXAYHD--DGWFICNSHLIKRFKMSK 237
N CIF + FD C Y CS A + DG FICN HL K F++ K
Sbjct: 13 NYCIFQGVNYQFD-CDGYTRQCSEDARYSQLDGTFICNFHLGKYFRILK 60
>UniRef50_A4KXH1 Cluster: AV-like serine/threonine protein kinase;
n=2; Ascovirus|Rep: AV-like serine/threonine protein
kinase - Heliothis virescens ascovirus 3e
Length = 656
Score = 35.5 bits (78), Expect = 1.2
Identities = 20/63 (31%), Positives = 32/63 (50%)
Frame = +3
Query: 420 NNEEAVNVICXNLKYTEVFTSGTQRLYTALRNYKKHSRHHKPEHVLFACVARRIAFFRRD 599
N + VN+ C + K + + T+G Q+LY L+ YKK + H ++ R F +R
Sbjct: 35 NRTDIVNMSCVSSKKSRLRTTGYQQLYAELKFYKKTLQFH--ASLVCDSAQGRCGFMKRL 92
Query: 600 QRP 608
RP
Sbjct: 93 SRP 95
>UniRef50_A5FEP2 Cluster: TonB-dependent receptor, plug; n=1;
Flavobacterium johnsoniae UW101|Rep: TonB-dependent
receptor, plug - Flavobacterium johnsoniae UW101
Length = 781
Score = 34.3 bits (75), Expect = 2.9
Identities = 29/103 (28%), Positives = 49/103 (47%), Gaps = 4/103 (3%)
Frame = +3
Query: 228 NVKNGF-AHFDEDDNQFKMTIARHLVGNKERGIKRILIPSATNYQEVF-NLNSMMQAEQL 401
N GF F+ DN +K+ + + N ER +KR + +NY E F L A+ +
Sbjct: 254 NFYGGFNGSFNYSDNNYKVRVP---IENVERDVKRFHDMTRSNYGEAFIGLKEKSWADDI 310
Query: 402 IFHLIYNN--EEAVNVICXNLKYTEVFTSGTQRLYTALRNYKK 524
LIY++ ++ N Y + F+ ++ YT + NY+K
Sbjct: 311 RLTLIYSDFYKQIQNDAGMVSVYGKAFSK--EQNYTGMINYRK 351
>UniRef50_UPI00015B5CC8 Cluster: PREDICTED: similar to neuralized;
n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
neuralized - Nasonia vitripennis
Length = 726
Score = 33.9 bits (74), Expect = 3.8
Identities = 17/46 (36%), Positives = 24/46 (52%)
Frame = +3
Query: 207 PPHQTF*NVKNGFAHFDEDDNQFKMTIARHLVGNKERGIKRILIPS 344
P Q F NV+ G H +ED+ Q A N R ++RI++PS
Sbjct: 291 PNRQHFNNVRRGQEHSNEDNAQHSRHSAMDDASNAGRDVERIIVPS 336
>UniRef50_UPI00015B542A Cluster: PREDICTED: similar to myosin-rhogap
protein, myr; n=1; Nasonia vitripennis|Rep: PREDICTED:
similar to myosin-rhogap protein, myr - Nasonia
vitripennis
Length = 2292
Score = 33.5 bits (73), Expect = 5.0
Identities = 26/91 (28%), Positives = 43/91 (47%), Gaps = 3/91 (3%)
Frame = +2
Query: 311 RKRYQANFNSKRNQLPRGV*SKQYDASR---TTNLSFDI*QXXXXXXYMRQSKIYRSFHK 481
R Y+ R LP+G+ S Q D T NL+ D Q ++R+S+ + +
Sbjct: 675 RLTYEEFIQLYRMLLPKGLLSTQTDVRDFLLTLNLNRDNYQLGTTKVFLRESEKIKLDIE 734
Query: 482 RHATVIHSVTQLQEAF*TPQTRTRFVRVCRA 574
H +I S+T +Q+ F R +F+R+ A
Sbjct: 735 LHQQIITSITTIQKWFRACLERRKFLRLKNA 765
>UniRef50_Q8XIR0 Cluster: Cation-transporting ATPase; n=12;
Clostridium|Rep: Cation-transporting ATPase -
Clostridium perfringens
Length = 849
Score = 33.1 bits (72), Expect = 6.6
Identities = 18/54 (33%), Positives = 31/54 (57%)
Frame = -1
Query: 353 IGCAWN*NSLDTSFFISN*MPSDRHFELIVVFVKMGKTIFDILKRLMRWLLQIN 192
IG A + D + S+ + D +FE IV V+ G+ I+D +++ +R+LL N
Sbjct: 604 IGVAMGISGTDVTKEASSMILMDDNFETIVSAVEEGRIIYDNIRKFIRYLLSCN 657
>UniRef50_Q20779 Cluster: Probable cytochrome c oxidase polypeptide
VIa, mitochondrial precursor; n=2; Caenorhabditis|Rep:
Probable cytochrome c oxidase polypeptide VIa,
mitochondrial precursor - Caenorhabditis elegans
Length = 128
Score = 33.1 bits (72), Expect = 6.6
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +3
Query: 495 LYTALRNYKKHSRHHKPEHVLFA 563
+Y A +++KKH H +PEHV +A
Sbjct: 67 MYAAFKDHKKHMSHERPEHVEYA 89
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 671,212,267
Number of Sequences: 1657284
Number of extensions: 12615086
Number of successful extensions: 29345
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 28543
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29337
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 54545459628
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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