Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120845.seq
         (692 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign...    24   4.0  
AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.           23   6.9  
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript...    23   9.1  

>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative
           FGF-signaling promoter protein.
          Length = 1197

 Score = 24.2 bits (50), Expect = 4.0
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = +2

Query: 269 SIQNDDR*AFSWK*RKRYQANFNSKRNQLPR 361
           SIQ  ++    WK R   Q +F  K++QL R
Sbjct: 875 SIQEVEQLVTLWKNRNDVQKSFREKQDQLAR 905


>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
          Length = 1459

 Score = 23.4 bits (48), Expect = 6.9
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = -1

Query: 125 TMDAKMQRLTLICRGAIPTGISAILL 48
           T+DA   RLT +    IP  I  + L
Sbjct: 633 TLDASFNRLTRVTPATIPNSIEFLFL 658


>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1099

 Score = 23.0 bits (47), Expect = 9.1
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = -1

Query: 113 KMQRLTLICRGAIPTGISAILLPL 42
           K QRL LI +   P+G+S    PL
Sbjct: 470 KRQRLVLIPKPGKPSGVSCSYRPL 493


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 731,708
Number of Sequences: 2352
Number of extensions: 14130
Number of successful extensions: 56
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 56
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 56
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 70250040
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)