Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120845.seq
         (692 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U12966-3|AAA20614.1|  128|Caenorhabditis elegans Temporarily ass...    33   0.19 
Z79639-1|CAB01916.1| 2948|Caenorhabditis elegans Hypothetical pr...    31   0.59 
Z81028-2|CAB02694.1|  996|Caenorhabditis elegans Hypothetical pr...    29   3.2  
U41036-4|AAT92061.1| 1018|Caenorhabditis elegans Hypothetical pr...    29   3.2  
U41036-3|AAL06055.1| 1030|Caenorhabditis elegans Hypothetical pr...    29   3.2  
U41036-2|AAA82385.2| 1086|Caenorhabditis elegans Hypothetical pr...    29   3.2  
Z92834-1|CAB07382.1|  564|Caenorhabditis elegans Hypothetical pr...    28   7.3  
Z82260-3|CAB05131.1|  346|Caenorhabditis elegans Hypothetical pr...    28   7.3  

>U12966-3|AAA20614.1|  128|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 174 protein.
          Length = 128

 Score = 33.1 bits (72), Expect = 0.19
 Identities = 11/23 (47%), Positives = 17/23 (73%)
 Frame = +3

Query: 495 LYTALRNYKKHSRHHKPEHVLFA 563
           +Y A +++KKH  H +PEHV +A
Sbjct: 67  MYAAFKDHKKHMSHERPEHVEYA 89


>Z79639-1|CAB01916.1| 2948|Caenorhabditis elegans Hypothetical
           protein F54E4.1 protein.
          Length = 2948

 Score = 31.5 bits (68), Expect = 0.59
 Identities = 14/50 (28%), Positives = 26/50 (52%)
 Frame = +3

Query: 234 KNGFAHFDEDDNQFKMTIARHLVGNKERGIKRILIPSATNYQEVFNLNSM 383
           +NGF +FDE  N+FK+    HL         +++  +  N + V+ L ++
Sbjct: 12  RNGFLYFDEIKNRFKICKNDHLKHQTSMNAHQVITGALNNGENVYALGNI 61


>Z81028-2|CAB02694.1|  996|Caenorhabditis elegans Hypothetical
           protein B0365.3 protein.
          Length = 996

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 20/56 (35%), Positives = 29/56 (51%)
 Frame = -1

Query: 353 IGCAWN*NSLDTSFFISN*MPSDRHFELIVVFVKMGKTIFDILKRLMRWLLQINHP 186
           IG A      D S   ++ +  D +F  IVV V+ G+ IFD LK+ + + L  N P
Sbjct: 703 IGVAMGIAGSDVSKQAADMILLDDNFASIVVGVEEGRLIFDNLKKSIAYTLTSNIP 758


>U41036-4|AAT92061.1| 1018|Caenorhabditis elegans Hypothetical
           protein T14E8.1c protein.
          Length = 1018

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = +1

Query: 166 PXAYHDDGWFICNSHLIKRFKMSKMVLPILTKTTI 270
           P AYH D  FI N+H +  F+    V  ++T + I
Sbjct: 194 PTAYHADSSFIHNNHALTGFEREGFVYFVMTASQI 228


>U41036-3|AAL06055.1| 1030|Caenorhabditis elegans Hypothetical
           protein T14E8.1b protein.
          Length = 1030

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = +1

Query: 166 PXAYHDDGWFICNSHLIKRFKMSKMVLPILTKTTI 270
           P AYH D  FI N+H +  F+    V  ++T + I
Sbjct: 194 PTAYHADSSFIHNNHALTGFEREGFVYFVMTASQI 228


>U41036-2|AAA82385.2| 1086|Caenorhabditis elegans Hypothetical
           protein T14E8.1a protein.
          Length = 1086

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = +1

Query: 166 PXAYHDDGWFICNSHLIKRFKMSKMVLPILTKTTI 270
           P AYH D  FI N+H +  F+    V  ++T + I
Sbjct: 194 PTAYHADSSFIHNNHALTGFEREGFVYFVMTASQI 228


>Z92834-1|CAB07382.1|  564|Caenorhabditis elegans Hypothetical
           protein F39B2.1 protein.
          Length = 564

 Score = 27.9 bits (59), Expect = 7.3
 Identities = 14/30 (46%), Positives = 18/30 (60%)
 Frame = +3

Query: 513 NYKKHSRHHKPEHVLFACVARRIAFFRRDQ 602
           N ++H+RHH  E VL AC      F RRD+
Sbjct: 308 NLRRHARHHSGEKVL-ACPFCARFFSRRDK 336


>Z82260-3|CAB05131.1|  346|Caenorhabditis elegans Hypothetical
           protein C32H11.4 protein.
          Length = 346

 Score = 27.9 bits (59), Expect = 7.3
 Identities = 11/37 (29%), Positives = 19/37 (51%)
 Frame = +1

Query: 70  VGMAPRQMRVNRCIFASIVSFDACITYKSPCSPXAYH 180
           +GM P  + + + +FA+  S D    + SP  P  Y+
Sbjct: 146 IGMQPHVLNITQDLFAADFSSDKVALFVSPADPNDYY 182


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,838,508
Number of Sequences: 27780
Number of extensions: 318989
Number of successful extensions: 782
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 742
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 782
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1592382278
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)