Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120843.seq
         (688 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    23   2.1  
AY569717-1|AAS86670.1|  397|Apis mellifera complementary sex det...    22   4.8  
AY569712-1|AAS86665.1|  408|Apis mellifera complementary sex det...    22   4.8  
AY569704-1|AAS86657.1|  426|Apis mellifera complementary sex det...    22   4.8  
AY569703-1|AAS86656.1|  396|Apis mellifera complementary sex det...    22   4.8  
AY569701-1|AAS86654.1|  407|Apis mellifera complementary sex det...    22   4.8  
AY569700-1|AAS86653.1|  407|Apis mellifera complementary sex det...    22   4.8  
AY569699-1|AAS86652.1|  396|Apis mellifera complementary sex det...    22   4.8  
AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex det...    22   4.8  

>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = -3

Query: 251 MLQNCCGKKPQQNL*SIELSGRTRTMR*PRAVF 153
           ML NCCGK   Q       S  +  +R PR++F
Sbjct: 362 MLPNCCGKWSSQKS-EPRRSIYSSLLRYPRSIF 393


>AY569717-1|AAS86670.1|  397|Apis mellifera complementary sex
           determiner protein.
          Length = 397

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = -3

Query: 446 NLNRYPHLSSMAFKIRKENNRI*FRPR 366
           N++ Y H      ++R E+N+I  R R
Sbjct: 4   NISNYSHHDEKFKQLRNEDNKIDLRSR 30


>AY569712-1|AAS86665.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = -3

Query: 446 NLNRYPHLSSMAFKIRKENNRI*FRPR 366
           N++ Y H      ++R E+N+I  R R
Sbjct: 4   NISNYSHHDEKFKQLRNEDNKIDLRSR 30


>AY569704-1|AAS86657.1|  426|Apis mellifera complementary sex
           determiner protein.
          Length = 426

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = -3

Query: 446 NLNRYPHLSSMAFKIRKENNRI*FRPR 366
           N++ Y H      ++R E+N+I  R R
Sbjct: 4   NISNYSHHDEKFKQLRNEDNKIDLRSR 30


>AY569703-1|AAS86656.1|  396|Apis mellifera complementary sex
           determiner protein.
          Length = 396

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = -3

Query: 446 NLNRYPHLSSMAFKIRKENNRI*FRPR 366
           N++ Y H      ++R E+N+I  R R
Sbjct: 4   NISNYSHHDEKFKQLRNEDNKIDLRSR 30


>AY569701-1|AAS86654.1|  407|Apis mellifera complementary sex
           determiner protein.
          Length = 407

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = -3

Query: 446 NLNRYPHLSSMAFKIRKENNRI*FRPR 366
           N++ Y H      ++R E+N+I  R R
Sbjct: 4   NISNYSHHDEKFKQLRNEDNKIDLRSR 30


>AY569700-1|AAS86653.1|  407|Apis mellifera complementary sex
           determiner protein.
          Length = 407

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = -3

Query: 446 NLNRYPHLSSMAFKIRKENNRI*FRPR 366
           N++ Y H      ++R E+N+I  R R
Sbjct: 4   NISNYSHHDEKFKQLRNEDNKIDLRSR 30


>AY569699-1|AAS86652.1|  396|Apis mellifera complementary sex
           determiner protein.
          Length = 396

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = -3

Query: 446 NLNRYPHLSSMAFKIRKENNRI*FRPR 366
           N++ Y H      ++R E+N+I  R R
Sbjct: 4   NISNYSHHDEKFKQLRNEDNKIDLRSR 30


>AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex
           determiner protein.
          Length = 428

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = -3

Query: 446 NLNRYPHLSSMAFKIRKENNRI*FRPR 366
           N++ Y H      ++R E+N+I  R R
Sbjct: 4   NISNYSHHDEKFKQLRNEDNKIDLRSR 30


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 200,889
Number of Sequences: 438
Number of extensions: 4515
Number of successful extensions: 14
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20952180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)