Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120839.seq
         (692 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    24   1.0  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    22   4.1  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    22   4.1  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   7.2  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    21   9.6  
AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax pr...    21   9.6  
AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esteras...    21   9.6  
AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esteras...    21   9.6  
AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esteras...    21   9.6  
AF146649-1|AAD38009.1|   96|Tribolium castaneum ultrathorax prot...    21   9.6  

>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 11/20 (55%), Positives = 12/20 (60%)
 Frame = -2

Query: 409 IFFRSNSIANSPLINCIRYR 350
           IF    SIAN   I+C RYR
Sbjct: 194 IFCPGGSIANGYAISCARYR 213


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 15/58 (25%), Positives = 27/58 (46%)
 Frame = +3

Query: 195  HTYVRNKVEAAKFVGIDALTLTGTVI*PKNNFSLRSKI*MKIIVLMEFSSNYLYLIQL 368
            HT   N+  +  ++G   + + GTVI P   F +     +    L ++SS Y  L+ +
Sbjct: 870  HTVKINENISMLYIGYQIILMIGTVIGPGTIFLMLVGAFVAAFGLDQWSSFYWNLLPI 927


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 15/58 (25%), Positives = 27/58 (46%)
 Frame = +3

Query: 195  HTYVRNKVEAAKFVGIDALTLTGTVI*PKNNFSLRSKI*MKIIVLMEFSSNYLYLIQL 368
            HT   N+  +  ++G   + + GTVI P   F +     +    L ++SS Y  L+ +
Sbjct: 870  HTVKINENISMLYIGYQIILMIGTVIGPGTIFLMLVGAFVAAFGLDQWSSFYWNLLPI 927


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 8/26 (30%), Positives = 16/26 (61%)
 Frame = +2

Query: 290 LSEIQNLNEDNSVDGILVQLPVPDTI 367
           +SEI  ++++  +   LV  P+ DT+
Sbjct: 555 VSEILKMDQNGQIKRNLVDAPLKDTV 580


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = +3

Query: 195 HTYVRNKVEAAKFVGIDALTLTGTVI*PKNNF 290
           HT   N+  +  ++G   + + GTVI P   F
Sbjct: 637 HTVKINENISMPYIGYQIILMIGTVIGPGTIF 668


>AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax
           protein.
          Length = 314

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -1

Query: 362 YQVQVIGREFHQHYYL 315
           YQ   + +EFH ++YL
Sbjct: 233 YQTLELEKEFHTNHYL 248


>AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 6/8 (75%), Positives = 7/8 (87%)
 Frame = +3

Query: 669 TWKPIVRN 692
           TWKP+ RN
Sbjct: 489 TWKPVTRN 496


>AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 6/8 (75%), Positives = 7/8 (87%)
 Frame = +3

Query: 669 TWKPIVRN 692
           TWKP+ RN
Sbjct: 489 TWKPVTRN 496


>AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 6/8 (75%), Positives = 7/8 (87%)
 Frame = +3

Query: 669 TWKPIVRN 692
           TWKP+ RN
Sbjct: 489 TWKPVTRN 496


>AF146649-1|AAD38009.1|   96|Tribolium castaneum ultrathorax
           protein.
          Length = 96

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -1

Query: 362 YQVQVIGREFHQHYYL 315
           YQ   + +EFH ++YL
Sbjct: 15  YQTLELEKEFHTNHYL 30


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 172,878
Number of Sequences: 336
Number of extensions: 3744
Number of successful extensions: 27
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18218375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)