Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120839.seq
         (692 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ974170-1|ABJ52810.1|  511|Anopheles gambiae serpin 12 protein.       26   1.3  
AY943929-1|AAX49502.1|  755|Anopheles gambiae laccase-2 isoform ...    25   3.0  
AY943928-1|AAX49501.1|  753|Anopheles gambiae laccase-2 isoform ...    25   3.0  

>DQ974170-1|ABJ52810.1|  511|Anopheles gambiae serpin 12 protein.
          Length = 511

 Score = 25.8 bits (54), Expect = 1.3
 Identities = 20/74 (27%), Positives = 35/74 (47%), Gaps = 2/74 (2%)
 Frame = +2

Query: 299 IQNLNED--NSVDGILVQLPVPDTINERRVCDAIAPEKDIDGFHIINIGRLCVDLPTIVP 472
           I+N N D  ++V   LVQ+PV   I + R+      EK +    +I +     DL  I  
Sbjct: 376 IKNFNPDTLSTVQKSLVQMPVQICIPKFRIDTTSRAEKPLAKLGLITMFTSKADLSGITT 435

Query: 473 ATALAVVEMLKRLT 514
              + V E+++ ++
Sbjct: 436 EQKIHVDELVQHVS 449


>AY943929-1|AAX49502.1|  755|Anopheles gambiae laccase-2 isoform B
           protein.
          Length = 755

 Score = 24.6 bits (51), Expect = 3.0
 Identities = 9/28 (32%), Positives = 13/28 (46%)
 Frame = -3

Query: 192 SLGHRQQLYSEWWELGFQDPPTVLFFAS 109
           S GH Q     WW     +PP+  + A+
Sbjct: 39  SFGHDQTPAGSWWSSHLTEPPSNFYQAT 66


>AY943928-1|AAX49501.1|  753|Anopheles gambiae laccase-2 isoform A
           protein.
          Length = 753

 Score = 24.6 bits (51), Expect = 3.0
 Identities = 9/28 (32%), Positives = 13/28 (46%)
 Frame = -3

Query: 192 SLGHRQQLYSEWWELGFQDPPTVLFFAS 109
           S GH Q     WW     +PP+  + A+
Sbjct: 39  SFGHDQTPAGSWWSSHLTEPPSNFYQAT 66


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 776,413
Number of Sequences: 2352
Number of extensions: 16642
Number of successful extensions: 25
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 70250040
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)