Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120839.seq
(692 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41552-3|AAC69100.2| 303|Caenorhabditis elegans Dauer or aging ... 57 1e-08
Z81522-9|CAB61005.2| 3674|Caenorhabditis elegans Hypothetical pr... 33 0.26
Z81063-9|CAB61012.2| 3674|Caenorhabditis elegans Hypothetical pr... 33 0.26
AJ012469-1|CAA10033.1| 3674|Caenorhabditis elegans DYS-1 protein... 33 0.26
AF098504-5|AAC67410.3| 322|Caenorhabditis elegans Serpentine re... 29 3.2
Z93378-3|CAB07585.3| 749|Caenorhabditis elegans Hypothetical pr... 28 5.5
AL023835-15|CAA19492.2| 520|Caenorhabditis elegans Hypothetical... 28 5.5
Z81494-10|CAN86581.1| 1507|Caenorhabditis elegans Hypothetical p... 28 7.3
Z81494-9|CAB04052.2| 1505|Caenorhabditis elegans Hypothetical pr... 28 7.3
Z38112-7|CAA86231.3| 2089|Caenorhabditis elegans Hypothetical pr... 28 7.3
Z38112-6|CAA86235.2| 870|Caenorhabditis elegans Hypothetical pr... 28 7.3
Z35637-8|CAO82018.1| 2089|Caenorhabditis elegans Hypothetical pr... 28 7.3
Z35637-7|CAA84690.2| 870|Caenorhabditis elegans Hypothetical pr... 28 7.3
DQ858354-1|ABI14559.1| 2084|Caenorhabditis elegans UNC-79 protein. 28 7.3
AC006617-4|AAF39771.1| 291|Caenorhabditis elegans Hypothetical ... 28 7.3
D63575-1|BAA09794.1| 146|Caenorhabditis elegans galectin protein. 27 9.6
AC024821-3|AAF60785.1| 146|Caenorhabditis elegans Galectin prot... 27 9.6
>U41552-3|AAC69100.2| 303|Caenorhabditis elegans Dauer or aging
adult overexpressionprotein 3 protein.
Length = 303
Score = 56.8 bits (131), Expect = 1e-08
Identities = 35/95 (36%), Positives = 52/95 (54%), Gaps = 4/95 (4%)
Frame = +2
Query: 272 ITEEQLLSEIQNLNEDNSVDGILVQLPV--PDTINERRVCDAIAPEKDIDGFHIINIGRL 445
IT+ L EI LN DN +DGI++QLP+ I+ V D I P KD+DG IN GRL
Sbjct: 75 ITQGDLKREIMALNHDNEIDGIIIQLPLDCKHEIDADSVIDLIDPLKDVDGLTRINAGRL 134
Query: 446 C-VDLP-TIVPATALAVVEMLKRLTSTHSVATXRD 544
+L TI P T + ++++ T + + ++
Sbjct: 135 ARGELQRTIFPCTPFGCLYLVQQATGDANFVSGKE 169
Score = 29.5 bits (63), Expect = 2.4
Identities = 19/41 (46%), Positives = 21/41 (51%)
Frame = +3
Query: 537 VVIGRSKNVGMPIAMMLHSDKRHESGLGMDATVTICHRYTP 659
VV+GRSK VG P A + L TVTICH TP
Sbjct: 171 VVLGRSKIVGSPAAALF---------LWHHGTVTICHSKTP 202
>Z81522-9|CAB61005.2| 3674|Caenorhabditis elegans Hypothetical protein
F15D3.1a protein.
Length = 3674
Score = 32.7 bits (71), Expect = 0.26
Identities = 17/52 (32%), Positives = 26/52 (50%)
Frame = +3
Query: 63 RILDGKALAMEIKKELKQKIAQWVGLGNRAPTIRCIIVGDDPASHTYVRNKV 218
R LD +A +KEL ++ + V L +RA I C + G P H +K+
Sbjct: 1734 RNLDDVDIAKSTRKELAERDSHIVSLTSRATAIHCALPGKGPQLHDVTLDKL 1785
>Z81063-9|CAB61012.2| 3674|Caenorhabditis elegans Hypothetical protein
F15D3.1a protein.
Length = 3674
Score = 32.7 bits (71), Expect = 0.26
Identities = 17/52 (32%), Positives = 26/52 (50%)
Frame = +3
Query: 63 RILDGKALAMEIKKELKQKIAQWVGLGNRAPTIRCIIVGDDPASHTYVRNKV 218
R LD +A +KEL ++ + V L +RA I C + G P H +K+
Sbjct: 1734 RNLDDVDIAKSTRKELAERDSHIVSLTSRATAIHCALPGKGPQLHDVTLDKL 1785
>AJ012469-1|CAA10033.1| 3674|Caenorhabditis elegans DYS-1 protein
protein.
Length = 3674
Score = 32.7 bits (71), Expect = 0.26
Identities = 17/52 (32%), Positives = 26/52 (50%)
Frame = +3
Query: 63 RILDGKALAMEIKKELKQKIAQWVGLGNRAPTIRCIIVGDDPASHTYVRNKV 218
R LD +A +KEL ++ + V L +RA I C + G P H +K+
Sbjct: 1734 RNLDDVDIAKSTRKELAERDSHIVSLTSRATAIHCALPGKGPQLHDVTLDKL 1785
>AF098504-5|AAC67410.3| 322|Caenorhabditis elegans Serpentine
receptor, class t protein62 protein.
Length = 322
Score = 29.1 bits (62), Expect = 3.2
Identities = 18/54 (33%), Positives = 28/54 (51%)
Frame = -2
Query: 388 IANSPLINCIRYR*LDENSINTIIFI*ILDLREKLFFGYITVPVNVNASMPTNF 227
I NS ++ I Y ++ NS N+ I + FF Y T+P+N+NA + F
Sbjct: 266 ICNSA-VHPIIYFIVNNNSTNSKICSKYSKFKMFEFFNYSTIPININACVLARF 318
>Z93378-3|CAB07585.3| 749|Caenorhabditis elegans Hypothetical
protein F19H8.4 protein.
Length = 749
Score = 28.3 bits (60), Expect = 5.5
Identities = 10/31 (32%), Positives = 19/31 (61%)
Frame = +1
Query: 427 NQHRKAVCGSTYHCAGYSIGCSGNAEKINID 519
N+ R +CGS +C+G ++ S N E + ++
Sbjct: 218 NERRVELCGSRSYCSGNNLRSSSNKENLILE 248
>AL023835-15|CAA19492.2| 520|Caenorhabditis elegans Hypothetical
protein Y37A1B.9 protein.
Length = 520
Score = 28.3 bits (60), Expect = 5.5
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +2
Query: 230 ICGHRCININRDSDITEEQLLSEIQNLNE 316
+CG +N N ++D++E+QL QNL E
Sbjct: 62 VCG--ILNFNSNTDLSEDQLKKVFQNLKE 88
>Z81494-10|CAN86581.1| 1507|Caenorhabditis elegans Hypothetical
protein F02E9.4b protein.
Length = 1507
Score = 27.9 bits (59), Expect = 7.3
Identities = 26/95 (27%), Positives = 45/95 (47%), Gaps = 2/95 (2%)
Frame = +2
Query: 248 ININRDSDITEEQLLSEIQNL--NEDNSVDGILVQLPVPDTINERRVCDAIAPEKDIDGF 421
IN + DIT EQL+SE+ + + ++ I++QL + + R PE D+D
Sbjct: 714 INAYANLDITREQLISELPKIMGTSGSDLEMIILQLLGAEKEPKNR------PENDMDAV 767
Query: 422 HIINIGRLCVDLPTIVPATALAVVEMLKRLTSTHS 526
+ DLP I P L +ML+++ + +
Sbjct: 768 -------MRKDLPAIQPKRGLRDQKMLQQVKNVEA 795
>Z81494-9|CAB04052.2| 1505|Caenorhabditis elegans Hypothetical
protein F02E9.4a protein.
Length = 1505
Score = 27.9 bits (59), Expect = 7.3
Identities = 26/95 (27%), Positives = 45/95 (47%), Gaps = 2/95 (2%)
Frame = +2
Query: 248 ININRDSDITEEQLLSEIQNL--NEDNSVDGILVQLPVPDTINERRVCDAIAPEKDIDGF 421
IN + DIT EQL+SE+ + + ++ I++QL + + R PE D+D
Sbjct: 714 INAYANLDITREQLISELPKIMGTSGSDLEMIILQLLGAEKEPKNR------PENDMDAV 767
Query: 422 HIINIGRLCVDLPTIVPATALAVVEMLKRLTSTHS 526
+ DLP I P L +ML+++ + +
Sbjct: 768 -------MRKDLPAIQPKRGLRDQKMLQQVKNVEA 795
>Z38112-7|CAA86231.3| 2089|Caenorhabditis elegans Hypothetical protein
E03A3.6 protein.
Length = 2089
Score = 27.9 bits (59), Expect = 7.3
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +2
Query: 425 IINIGRLCVDLPTIVPATALAVVEMLKRLTSTHSVATXRDRS 550
+++IG +CV PTIV LA ++ R ST R +S
Sbjct: 1446 MVHIGAVCVMQPTIVEPEGLAPEPLIARKRSTAVQEVRRKKS 1487
>Z38112-6|CAA86235.2| 870|Caenorhabditis elegans Hypothetical
protein E03A3.6b protein.
Length = 870
Score = 27.9 bits (59), Expect = 7.3
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +2
Query: 425 IINIGRLCVDLPTIVPATALAVVEMLKRLTSTHSVATXRDRS 550
+++IG +CV PTIV LA ++ R ST R +S
Sbjct: 227 MVHIGAVCVMQPTIVEPEGLAPEPLIARKRSTAVQEVRRKKS 268
>Z35637-8|CAO82018.1| 2089|Caenorhabditis elegans Hypothetical protein
E03A3.6 protein.
Length = 2089
Score = 27.9 bits (59), Expect = 7.3
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +2
Query: 425 IINIGRLCVDLPTIVPATALAVVEMLKRLTSTHSVATXRDRS 550
+++IG +CV PTIV LA ++ R ST R +S
Sbjct: 1446 MVHIGAVCVMQPTIVEPEGLAPEPLIARKRSTAVQEVRRKKS 1487
>Z35637-7|CAA84690.2| 870|Caenorhabditis elegans Hypothetical
protein E03A3.6b protein.
Length = 870
Score = 27.9 bits (59), Expect = 7.3
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +2
Query: 425 IINIGRLCVDLPTIVPATALAVVEMLKRLTSTHSVATXRDRS 550
+++IG +CV PTIV LA ++ R ST R +S
Sbjct: 227 MVHIGAVCVMQPTIVEPEGLAPEPLIARKRSTAVQEVRRKKS 268
>DQ858354-1|ABI14559.1| 2084|Caenorhabditis elegans UNC-79 protein.
Length = 2084
Score = 27.9 bits (59), Expect = 7.3
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +2
Query: 425 IINIGRLCVDLPTIVPATALAVVEMLKRLTSTHSVATXRDRS 550
+++IG +CV PTIV LA ++ R ST R +S
Sbjct: 1449 MVHIGAVCVMQPTIVEPEGLAPEPLIARKRSTAVQEVRRKKS 1490
>AC006617-4|AAF39771.1| 291|Caenorhabditis elegans Hypothetical
protein C39B5.7 protein.
Length = 291
Score = 27.9 bits (59), Expect = 7.3
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +2
Query: 329 DGILVQLPVPDTINERRVCDAIAPEKDIDGFHIINIG-RLCVD 454
D IL +LP D ++ R+VC ++ D G H+ I +C D
Sbjct: 7 DEILSKLPAMDLLSCRKVCKSLRSAVDQSGNHLNRISFDICND 49
>D63575-1|BAA09794.1| 146|Caenorhabditis elegans galectin protein.
Length = 146
Score = 27.5 bits (58), Expect = 9.6
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +2
Query: 101 EGAEAKNSTVGGSWKPSSHHS 163
EGA NST GG W+ H+
Sbjct: 67 EGAVVNNSTSGGGWQSEDRHA 87
>AC024821-3|AAF60785.1| 146|Caenorhabditis elegans Galectin protein
6 protein.
Length = 146
Score = 27.5 bits (58), Expect = 9.6
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +2
Query: 101 EGAEAKNSTVGGSWKPSSHHS 163
EGA NST GG W+ H+
Sbjct: 67 EGAVVNNSTSGGGWQSEDRHA 87
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,896,930
Number of Sequences: 27780
Number of extensions: 364660
Number of successful extensions: 935
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 886
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 933
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1592382278
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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