Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120837.seq
         (669 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    25   0.56 
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    24   1.3  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    23   2.3  
AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory recept...    23   3.0  
S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Triboliu...    22   4.0  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    21   6.9  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    21   9.1  

>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 25.0 bits (52), Expect = 0.56
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -2

Query: 521 TCHCLYSFSGRYTFEY 474
           TCHC Y ++G+   EY
Sbjct: 84  TCHCPYGYTGKDCGEY 99


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 11/31 (35%), Positives = 15/31 (48%)
 Frame = +3

Query: 576 RCPNERCANCANPTALWCTRKNEGSSASFIG 668
           + P E CA C N T+L  + +N      F G
Sbjct: 723 KVPGECCAICVNATSLVESNRNVPQKCIFNG 753


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = -3

Query: 499 LVGVIPLNTINMDLNSLISKFAVPRVMVTLL 407
           +VGV PLN +N +   L   F   +V+ T L
Sbjct: 37  IVGVFPLNHLNEEPEKLHFTFKSWKVLYTSL 67


>AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory receptor
           candidate 31 protein.
          Length = 250

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 14/56 (25%), Positives = 29/56 (51%)
 Frame = -3

Query: 553 AHNHAVDFESQHAIVSTVLVGVIPLNTINMDLNSLISKFAVPRVMVTLLDVLAAFG 386
           A NH++  + +  I++ V++ V   N I+   N  +  FAV  +++     ++ FG
Sbjct: 5   AINHSL--KKRLKIITIVILVVATGNIIHTTSNKQLQFFAVEHLLIQCYIAVSIFG 58


>S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Tribolium
           castaneum homeodomainprotein mRNA, complete cds. ).
          Length = 327

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = +2

Query: 464 HVYCIQRYNAH*NCRDNGMLRFEVDSMI 547
           H Y  +   A+ N   NG L+F +D+++
Sbjct: 109 HYYNQKTLQANNNDASNGNLKFSIDNIL 136


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +3

Query: 321 GSNKVGTNSIFLGTVYD 371
           G+N++GT  IFL   +D
Sbjct: 492 GNNRMGTCRIFLAPQFD 508


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -1

Query: 603 NSRTSRSDSGPVLGSIK 553
           N RT RSD GP +  ++
Sbjct: 273 NPRTYRSDEGPQITELE 289


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,330
Number of Sequences: 336
Number of extensions: 3405
Number of successful extensions: 14
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17385535
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)