Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120837.seq
         (669 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript...    25   2.2  
AY334007-1|AAR01132.1|  202|Anopheles gambiae odorant receptor 1...    25   2.9  
AY334006-1|AAR01131.1|  202|Anopheles gambiae odorant receptor 1...    25   2.9  
AY334005-1|AAR01130.1|  202|Anopheles gambiae odorant receptor 1...    25   2.9  
AF364130-1|AAL35506.1|  417|Anopheles gambiae putative odorant r...    25   2.9  
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript...    24   5.0  
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    23   6.6  
AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T...    23   8.7  
AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T...    23   8.7  

>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1154

 Score = 25.0 bits (52), Expect = 2.2
 Identities = 11/32 (34%), Positives = 15/32 (46%)
 Frame = -2

Query: 629 TPECSWICAIRAPLVRTAAPCWGRSSTQSCCR 534
           T  C  + A+    +R AAP W  + T   CR
Sbjct: 788 TSRCRLLAAVADSTMRYAAPVWHGALTNRECR 819



 Score = 23.8 bits (49), Expect = 5.0
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = +1

Query: 514 WHVAIRSRQHDCVLDRPQHGAAVR 585
           WH A+ +R+   +L R Q  AA+R
Sbjct: 809 WHGALTNRECRSLLKRVQRKAAIR 832


>AY334007-1|AAR01132.1|  202|Anopheles gambiae odorant receptor 1
           protein.
          Length = 202

 Score = 24.6 bits (51), Expect = 2.9
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = +2

Query: 602 LRKSNCTLVYTKKRGQLS 655
           LRK NCTL + K+R + S
Sbjct: 74  LRKLNCTLYHPKQREEFS 91


>AY334006-1|AAR01131.1|  202|Anopheles gambiae odorant receptor 1
           protein.
          Length = 202

 Score = 24.6 bits (51), Expect = 2.9
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = +2

Query: 602 LRKSNCTLVYTKKRGQLS 655
           LRK NCTL + K+R + S
Sbjct: 74  LRKLNCTLYHPKQREEFS 91


>AY334005-1|AAR01130.1|  202|Anopheles gambiae odorant receptor 1
           protein.
          Length = 202

 Score = 24.6 bits (51), Expect = 2.9
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = +2

Query: 602 LRKSNCTLVYTKKRGQLS 655
           LRK NCTL + K+R + S
Sbjct: 74  LRKLNCTLYHPKQREEFS 91


>AF364130-1|AAL35506.1|  417|Anopheles gambiae putative odorant
           receptor Or1 protein.
          Length = 417

 Score = 24.6 bits (51), Expect = 2.9
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = +2

Query: 602 LRKSNCTLVYTKKRGQLS 655
           LRK NCTL + K+R + S
Sbjct: 108 LRKLNCTLYHPKQREEFS 125


>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1168

 Score = 23.8 bits (49), Expect = 5.0
 Identities = 8/26 (30%), Positives = 14/26 (53%)
 Frame = -2

Query: 611 ICAIRAPLVRTAAPCWGRSSTQSCCR 534
           + A+ A ++R  AP W  ++    CR
Sbjct: 789 LAAVAASIIRYGAPVWTEATDLQWCR 814


>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
           protein.
          Length = 1645

 Score = 23.4 bits (48), Expect = 6.6
 Identities = 16/61 (26%), Positives = 26/61 (42%)
 Frame = -3

Query: 340 VPTLLEPSLTMSSIDSGFSAIYIWLNLLSRVRCANWPPGRY*ALRLIVCSRLIPPIRCSA 161
           V T+ E    M +I    +  +I   +LSR R    P       + ++C  L   +R S+
Sbjct: 62  VATIAEMDRIMGNIAGNSTEAFICTPVLSRQRATRAPTTSTWTSKSVLCEELFLFLRRSS 121

Query: 160 L 158
           L
Sbjct: 122 L 122


>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
           phosphatase protein.
          Length = 1977

 Score = 23.0 bits (47), Expect = 8.7
 Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
 Frame = +3

Query: 333 VGTNSIFLGTVYD-YGVKSPNAASTSSNVTMTRGTANFDIKEFKS 464
           VG  S  +  V D     SP + S   N +MT+  +  DIKE  S
Sbjct: 635 VGIGSTSVDAVGDAMASSSPASCSPEQNGSMTKTRSYSDIKEATS 679


>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
           phosphatase protein.
          Length = 1978

 Score = 23.0 bits (47), Expect = 8.7
 Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
 Frame = +3

Query: 333 VGTNSIFLGTVYD-YGVKSPNAASTSSNVTMTRGTANFDIKEFKS 464
           VG  S  +  V D     SP + S   N +MT+  +  DIKE  S
Sbjct: 635 VGIGSTSVDAVGDAMASSSPASCSPEQNGSMTKTRSYSDIKEATS 679


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 724,531
Number of Sequences: 2352
Number of extensions: 15296
Number of successful extensions: 43
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 43
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 66904800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)