Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120837.seq
(669 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024798-2|AAK29923.1| 352|Caenorhabditis elegans Hypothetical ... 29 3.9
Z81527-14|CAB04278.2| 506|Caenorhabditis elegans Hypothetical p... 28 5.2
Z79753-8|CAB02089.2| 506|Caenorhabditis elegans Hypothetical pr... 28 5.2
Z54342-2|CAA91144.2| 1220|Caenorhabditis elegans Hypothetical pr... 28 5.2
U50068-6|AAB37736.2| 1079|Caenorhabditis elegans Hypothetical pr... 27 9.1
AF101309-3|AAN60514.1| 760|Caenorhabditis elegans Hypothetical ... 27 9.1
AF101309-2|AAL32230.1| 1601|Caenorhabditis elegans Hypothetical ... 27 9.1
AF101309-1|AAL32229.1| 1680|Caenorhabditis elegans Hypothetical ... 27 9.1
AF047663-1|AAC04453.2| 322|Caenorhabditis elegans Delta/serrate... 27 9.1
>AC024798-2|AAK29923.1| 352|Caenorhabditis elegans Hypothetical
protein Y48G9A.9a protein.
Length = 352
Score = 28.7 bits (61), Expect = 3.9
Identities = 15/42 (35%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = +1
Query: 124 NLNSLTEASPSLGQSSESVESDENKRLNVK-LNNARVANLRI 246
N N++ E P+ QSS E+D++ R V+ LNN +A ++
Sbjct: 17 NNNNVNEKRPASAQSSNGTETDDHHRKYVETLNNFIIATEKL 58
>Z81527-14|CAB04278.2| 506|Caenorhabditis elegans Hypothetical
protein F35E12.8 protein.
Length = 506
Score = 28.3 bits (60), Expect = 5.2
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 5/62 (8%)
Frame = +3
Query: 249 TRDNKLSQMYIAEKPLSIDDIVK-----EGSNKVGTNSIFLGTVYDYGVKSPNAASTSSN 413
T DN + + + ++ D ++K +G N NS F+G +YDY V SP +S N
Sbjct: 161 TNDNVVINVALVDQIGKTDIVIKLIYVYDGPN---VNSRFVGNLYDY-VNSPTLMKSSGN 216
Query: 414 VT 419
T
Sbjct: 217 ST 218
>Z79753-8|CAB02089.2| 506|Caenorhabditis elegans Hypothetical
protein F35E12.8 protein.
Length = 506
Score = 28.3 bits (60), Expect = 5.2
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 5/62 (8%)
Frame = +3
Query: 249 TRDNKLSQMYIAEKPLSIDDIVK-----EGSNKVGTNSIFLGTVYDYGVKSPNAASTSSN 413
T DN + + + ++ D ++K +G N NS F+G +YDY V SP +S N
Sbjct: 161 TNDNVVINVALVDQIGKTDIVIKLIYVYDGPN---VNSRFVGNLYDY-VNSPTLMKSSGN 216
Query: 414 VT 419
T
Sbjct: 217 ST 218
>Z54342-2|CAA91144.2| 1220|Caenorhabditis elegans Hypothetical
protein C08H9.2 protein.
Length = 1220
Score = 28.3 bits (60), Expect = 5.2
Identities = 19/71 (26%), Positives = 35/71 (49%)
Frame = +3
Query: 120 IKFKFLNRGVAQFRAEQRIGGIRREQTIKRKA**RPGGQFAHRTRDNKLSQMYIAEKPLS 299
+ F+ L++ VA+ + E I ++ T+ R R GG + +D Q+ I + +
Sbjct: 402 LAFEPLSKEVARLQMELAIEKVKVHPTLHRHVIGR-GGSLISKIKDQHGVQITIPNEETN 460
Query: 300 IDDIVKEGSNK 332
D+IV EG +
Sbjct: 461 SDEIVVEGKKE 471
>U50068-6|AAB37736.2| 1079|Caenorhabditis elegans Hypothetical
protein C01G5.4 protein.
Length = 1079
Score = 27.5 bits (58), Expect = 9.1
Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
Frame = +3
Query: 396 ASTSSNVTMTRGTANFD--IKEFKSMFIVFKGIT 491
A+TS+NVT + T NFD +K + V GIT
Sbjct: 133 ATTSTNVTNAKSTTNFDGYLKHISVIAHVANGIT 166
>AF101309-3|AAN60514.1| 760|Caenorhabditis elegans Hypothetical
protein H24G06.1c protein.
Length = 760
Score = 27.5 bits (58), Expect = 9.1
Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
Frame = -3
Query: 622 SAVGFAQFAHLSFGQRPRVGVDQAHNH---AVDFESQHAIVST 503
+A G LSF P + V AH+H ++DF S HA S+
Sbjct: 491 TATGMLYIVDLSFSDTPIIDVINAHDHDVTSIDF-SDHASTSS 532
>AF101309-2|AAL32230.1| 1601|Caenorhabditis elegans Hypothetical
protein H24G06.1b protein.
Length = 1601
Score = 27.5 bits (58), Expect = 9.1
Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
Frame = -3
Query: 622 SAVGFAQFAHLSFGQRPRVGVDQAHNH---AVDFESQHAIVST 503
+A G LSF P + V AH+H ++DF S HA S+
Sbjct: 491 TATGMLYIVDLSFSDTPIIDVINAHDHDVTSIDF-SDHASTSS 532
>AF101309-1|AAL32229.1| 1680|Caenorhabditis elegans Hypothetical
protein H24G06.1a protein.
Length = 1680
Score = 27.5 bits (58), Expect = 9.1
Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
Frame = -3
Query: 622 SAVGFAQFAHLSFGQRPRVGVDQAHNH---AVDFESQHAIVST 503
+A G LSF P + V AH+H ++DF S HA S+
Sbjct: 491 TATGMLYIVDLSFSDTPIIDVINAHDHDVTSIDF-SDHASTSS 532
>AF047663-1|AAC04453.2| 322|Caenorhabditis elegans
Delta/serrate/lag-2 domain protein2 protein.
Length = 322
Score = 27.5 bits (58), Expect = 9.1
Identities = 16/46 (34%), Positives = 20/46 (43%)
Frame = -2
Query: 623 ECSWICAIRAPLVRTAAPCWGRSSTQSCCRLRIATCHCLYSFSGRY 486
+CS +CA APC+ SST C CL F G+Y
Sbjct: 170 QCSMMCACE-----NDAPCY--SSTDPRTSREYVYCECLTGFEGKY 208
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,543,341
Number of Sequences: 27780
Number of extensions: 325986
Number of successful extensions: 989
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 935
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 989
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1508017654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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