Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120837.seq
(669 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein. 25 0.65
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 25 0.65
AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein. 25 0.65
AF134821-1|AAD40236.1| 226|Apis mellifera hexamerin protein. 25 0.65
DQ011228-1|AAY63897.1| 486|Apis mellifera Amt-2-like protein pr... 23 2.6
D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein. 23 3.5
AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase pro... 23 3.5
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 22 4.6
AF498306-5|AAM19330.1| 456|Apis mellifera dopamine receptor typ... 22 4.6
AF469010-1|AAL93136.1| 678|Apis mellifera cGMP-dependent protei... 22 4.6
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase... 22 6.1
>EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein.
Length = 683
Score = 25.0 bits (52), Expect = 0.65
Identities = 13/37 (35%), Positives = 16/37 (43%)
Frame = +3
Query: 261 KLSQMYIAEKPLSIDDIVKEGSNKVGTNSIFLGTVYD 371
K Q + KP + +V N G IFLG YD
Sbjct: 487 KARQYRLNHKPFTYHIVVNSDKNVKGMVRIFLGPKYD 523
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 25.0 bits (52), Expect = 0.65
Identities = 13/25 (52%), Positives = 17/25 (68%), Gaps = 1/25 (4%)
Frame = +3
Query: 369 DYGVKSPNAAS-TSSNVTMTRGTAN 440
+Y + +AAS TSS V +TRGT N
Sbjct: 6 NYALDVSSAASKTSSKVMLTRGTVN 30
>AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein.
Length = 683
Score = 25.0 bits (52), Expect = 0.65
Identities = 13/37 (35%), Positives = 16/37 (43%)
Frame = +3
Query: 261 KLSQMYIAEKPLSIDDIVKEGSNKVGTNSIFLGTVYD 371
K Q + KP + +V N G IFLG YD
Sbjct: 487 KARQYRLNHKPFTYHIVVNSDKNVKGMVRIFLGPKYD 523
>AF134821-1|AAD40236.1| 226|Apis mellifera hexamerin protein.
Length = 226
Score = 25.0 bits (52), Expect = 0.65
Identities = 13/37 (35%), Positives = 16/37 (43%)
Frame = +3
Query: 261 KLSQMYIAEKPLSIDDIVKEGSNKVGTNSIFLGTVYD 371
K Q + KP + +V N G IFLG YD
Sbjct: 113 KARQYRLNHKPFTYHIVVNSDKNVKGMVRIFLGPKYD 149
>DQ011228-1|AAY63897.1| 486|Apis mellifera Amt-2-like protein
protein.
Length = 486
Score = 23.0 bits (47), Expect = 2.6
Identities = 12/40 (30%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = -3
Query: 496 VGVIPLNTINMDLNSLISKFAVPRVMVTLLDVLAAF-GDL 380
+G +P+N IN+ L I ++ +LL ++ A+ GD+
Sbjct: 72 IGSVPVNNINLILLQNIIDICWITMVYSLLGIIIAYTGDV 111
>D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein.
Length = 567
Score = 22.6 bits (46), Expect = 3.5
Identities = 8/24 (33%), Positives = 12/24 (50%)
Frame = -3
Query: 271 WLNLLSRVRCANWPPGRY*ALRLI 200
W+ + NW PG + LRL+
Sbjct: 330 WMTYMPPSGIPNWVPGNHDQLRLV 353
>AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase
protein.
Length = 567
Score = 22.6 bits (46), Expect = 3.5
Identities = 8/24 (33%), Positives = 12/24 (50%)
Frame = -3
Query: 271 WLNLLSRVRCANWPPGRY*ALRLI 200
W+ + NW PG + LRL+
Sbjct: 330 WMTYMPPSGIPNWVPGNHDQLRLV 353
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 22.2 bits (45), Expect = 4.6
Identities = 9/34 (26%), Positives = 17/34 (50%), Gaps = 2/34 (5%)
Frame = +2
Query: 500 NCR--DNGMLRFEVDSMIVCLIDPNTGPLSEREV 595
NC+ D+ ++ + C DPN P+S ++
Sbjct: 34 NCKNYDHPTTLLKLKRYLFCEYDPNVRPISSHQI 67
>AF498306-5|AAM19330.1| 456|Apis mellifera dopamine receptor type
D2 protein.
Length = 456
Score = 22.2 bits (45), Expect = 4.6
Identities = 11/43 (25%), Positives = 19/43 (44%)
Frame = -2
Query: 644 LVFSCTPECSWICAIRAPLVRTAAPCWGRSSTQSCCRLRIATC 516
+VF+ WI + P++ CW R ++ R+ A C
Sbjct: 370 IVFAAVTWLGWINSGMNPVIYA---CWSRDFRRAFVRILCACC 409
>AF469010-1|AAL93136.1| 678|Apis mellifera cGMP-dependent protein
kinase foraging protein.
Length = 678
Score = 22.2 bits (45), Expect = 4.6
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 4/43 (9%)
Frame = +1
Query: 127 LNSLTEASPSLGQSSESVESDENK----RLNVKLNNARVANLR 243
++SL E SS SVE EN+ LN + + R+ +LR
Sbjct: 326 ISSLDEIRTRYKDSSSSVEGWENRATIPELNEEFRDLRLQDLR 368
>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
protein.
Length = 1143
Score = 21.8 bits (44), Expect = 6.1
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = +1
Query: 616 LHSGVHEKTRAAQQVLLG 669
LH+G EKT + QV LG
Sbjct: 30 LHAGNAEKTLCSGQVCLG 47
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 185,668
Number of Sequences: 438
Number of extensions: 4263
Number of successful extensions: 16
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20221290
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -