Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120836.seq
         (600 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           26   0.81 
AF532982-1|AAQ10289.1|  459|Anopheles gambiae putative RNA methy...    24   3.3  
AJ821850-1|CAH25390.1|  426|Anopheles gambiae alpha-2,6-sialyltr...    24   4.3  
AY146753-1|AAO12068.1|  311|Anopheles gambiae odorant-binding pr...    23   7.5  
AY146750-1|AAO12065.1|  311|Anopheles gambiae odorant-binding pr...    23   7.5  
AJ439060-18|CAD27769.1|  257|Anopheles gambiae hypothetical prot...    23   10.0 

>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 26.2 bits (55), Expect = 0.81
 Identities = 25/68 (36%), Positives = 31/68 (45%), Gaps = 4/68 (5%)
 Frame = +2

Query: 62   SANNHTPVLGLHDRARSRSKAKQ*----ASPARISFSCSWPSSPRILTIVSSSNNWQLAN 229
            S   HT   GL  R R   +  +     ASPAR++ S   P+SP   T    S   Q A+
Sbjct: 1425 SGGGHTGPAGLISRWRDMEEGGRQSTPPASPARLARSS--PASP---TPSKKSKRHQSAS 1479

Query: 230  PSRHRLQS 253
            P RH L S
Sbjct: 1480 PIRHILNS 1487


>AF532982-1|AAQ10289.1|  459|Anopheles gambiae putative RNA
           methylase protein.
          Length = 459

 Score = 24.2 bits (50), Expect = 3.3
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -3

Query: 535 IYIPNTTKYSYVQKYSDILQ 476
           ++ P+T+ Y   Q Y D+LQ
Sbjct: 338 VHYPSTSPYQLCQMYKDLLQ 357


>AJ821850-1|CAH25390.1|  426|Anopheles gambiae
           alpha-2,6-sialyltransferase protein.
          Length = 426

 Score = 23.8 bits (49), Expect = 4.3
 Identities = 13/30 (43%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
 Frame = -2

Query: 173 TAKNRRSLFER-EKPTAWLWIENAPDRVTP 87
           T K+++S+    EKPT WL   +AP R+ P
Sbjct: 63  TEKSQKSVSSSDEKPTLWLKDHDAP-RIRP 91


>AY146753-1|AAO12068.1|  311|Anopheles gambiae odorant-binding
           protein AgamOBP34 protein.
          Length = 311

 Score = 23.0 bits (47), Expect = 7.5
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = -1

Query: 429 YCNSVHVCKLDRC 391
           YCN V  C L +C
Sbjct: 296 YCNKVKTCPLHKC 308


>AY146750-1|AAO12065.1|  311|Anopheles gambiae odorant-binding
           protein AgamOBP37 protein.
          Length = 311

 Score = 23.0 bits (47), Expect = 7.5
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = -1

Query: 429 YCNSVHVCKLDRC 391
           YCN V  C L +C
Sbjct: 296 YCNKVKTCPLHKC 308


>AJ439060-18|CAD27769.1|  257|Anopheles gambiae hypothetical protein
           protein.
          Length = 257

 Score = 22.6 bits (46), Expect = 10.0
 Identities = 15/50 (30%), Positives = 20/50 (40%)
 Frame = +2

Query: 152 SFSCSWPSSPRILTIVSSSNNWQLANPSRHRLQSRVWSTASKFCDIRVYC 301
           S  CS   SP+    V S N      P +H  Q R  S++ +    R  C
Sbjct: 43  SRKCSRNGSPKFAPAVQSKNRMPPVPPPKHS-QRRRRSSSPRTRQFRSVC 91


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 635,877
Number of Sequences: 2352
Number of extensions: 13392
Number of successful extensions: 18
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 58029966
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)