Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120835.seq
(416 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q0GYC3 Cluster: Putative uncharacterized protein; n=2; ... 102 3e-21
UniRef50_P41658 Cluster: Late expression factor 5; n=13; Nucleop... 102 3e-21
UniRef50_Q77K58 Cluster: Lef5; n=4; Nucleopolyhedrovirus|Rep: Le... 59 3e-08
UniRef50_O10344 Cluster: Late expression factor 5; n=8; Nucleopo... 53 3e-06
UniRef50_Q0IL15 Cluster: Lef-5; n=5; Nucleopolyhedrovirus|Rep: L... 49 3e-05
UniRef50_P41727 Cluster: Late expression factor 5 homolog; n=10;... 44 0.001
UniRef50_P24649 Cluster: DNA-binding protein; n=6; Nucleopolyhed... 41 0.012
UniRef50_UPI0000F1D641 Cluster: PREDICTED: similar to tenascin-R... 34 1.4
UniRef50_Q5FVX1 Cluster: Habp2-prov protein; n=2; Xenopus tropic... 33 3.1
UniRef50_Q9SY59 Cluster: F14N23.5; n=8; Magnoliophyta|Rep: F14N2... 32 4.1
UniRef50_Q09AD1 Cluster: Putative uncharacterized protein; n=1; ... 31 7.2
UniRef50_A7IDZ7 Cluster: Putative uncharacterized protein; n=1; ... 31 9.6
>UniRef50_Q0GYC3 Cluster: Putative uncharacterized protein; n=2;
Nucleopolyhedrovirus|Rep: Putative uncharacterized
protein - Plutella xylostella multiple
nucleopolyhedrovirus
Length = 74
Score = 102 bits (244), Expect = 3e-21
Identities = 44/59 (74%), Positives = 45/59 (76%)
Frame = -2
Query: 187 MNGSWIFCMCEVYPGGXCNPSFCVCV*YRLKNGAGVSNHMWHRLKNDDGDDKPCLNCVI 11
MNGSWIFCMC VYPGG CNPSFC C VSNHMW+RLKN DGDDKPCLNCVI
Sbjct: 1 MNGSWIFCMCGVYPGGVCNPSFCAC----------VSNHMWYRLKNGDGDDKPCLNCVI 49
>UniRef50_P41658 Cluster: Late expression factor 5; n=13;
Nucleopolyhedrovirus|Rep: Late expression factor 5 -
Autographa californica nuclear polyhedrosis virus
(AcMNPV)
Length = 265
Score = 102 bits (244), Expect = 3e-21
Identities = 48/49 (97%), Positives = 49/49 (100%)
Frame = -2
Query: 400 LNDKVIYLQNSNKNKLFELSGLSLKSCRHDFVTVESQTRAGDEIASFLR 254
LNDKVIYLQNSNKNKLFELSGLSLKSCRHDFVTVESQTRAGDEIASF+R
Sbjct: 207 LNDKVIYLQNSNKNKLFELSGLSLKSCRHDFVTVESQTRAGDEIASFIR 255
>UniRef50_Q77K58 Cluster: Lef5; n=4; Nucleopolyhedrovirus|Rep: Lef5
- Helicoverpa armigera NPV
Length = 315
Score = 59.3 bits (137), Expect = 3e-08
Identities = 24/42 (57%), Positives = 35/42 (83%)
Frame = -2
Query: 379 LQNSNKNKLFELSGLSLKSCRHDFVTVESQTRAGDEIASFLR 254
+ +S K KL+ ++G+SL++C+H FVTVE QTRAGDEI SF++
Sbjct: 260 INSSLKYKLYSINGMSLRACQHSFVTVEKQTRAGDEIVSFIK 301
>UniRef50_O10344 Cluster: Late expression factor 5; n=8;
Nucleopolyhedrovirus|Rep: Late expression factor 5 -
Orgyia pseudotsugata multicapsid polyhedrosis virus
(OpMNPV)
Length = 263
Score = 52.8 bits (121), Expect = 3e-06
Identities = 28/54 (51%), Positives = 34/54 (62%), Gaps = 5/54 (9%)
Frame = -2
Query: 400 LNDKVIYLQNSN-----KNKLFELSGLSLKSCRHDFVTVESQTRAGDEIASFLR 254
L+D+VIYL N N + L SG SL C H + TVE QTRAGDE+ SF+R
Sbjct: 201 LSDRVIYLHNKNDVLDERTLLHGPSGTSLAPCLHRYATVERQTRAGDEMVSFIR 254
>UniRef50_Q0IL15 Cluster: Lef-5; n=5; Nucleopolyhedrovirus|Rep:
Lef-5 - Leucania separata nuclear polyhedrosis virus
(LsNPV)
Length = 302
Score = 49.2 bits (112), Expect = 3e-05
Identities = 22/46 (47%), Positives = 31/46 (67%)
Frame = -2
Query: 370 SNKNKLFELSGLSLKSCRHDFVTVESQTRAGDEIASFLRTVGCVEC 233
++ ++L +SG+SL C+H+FV VE Q RAGDE SF+R C C
Sbjct: 251 ADADRLHPMSGMSLNLCKHEFVVVERQLRAGDEAVSFIR--HCKRC 294
>UniRef50_P41727 Cluster: Late expression factor 5 homolog; n=10;
Granulovirus|Rep: Late expression factor 5 homolog -
Cryptophlebia leucotreta granulosis virus (ClGV)
(Cryptophlebialeucotreta granulovirus)
Length = 240
Score = 44.4 bits (100), Expect = 0.001
Identities = 20/46 (43%), Positives = 31/46 (67%)
Frame = -2
Query: 370 SNKNKLFELSGLSLKSCRHDFVTVESQTRAGDEIASFLRTVGCVEC 233
S+++ L L+G ++ SC HD+V E Q RAGDE+ SF++ C +C
Sbjct: 194 SSQSSLSNLNGYTIASCVHDYVIEEHQLRAGDEMVSFIKF--CKKC 237
>UniRef50_P24649 Cluster: DNA-binding protein; n=6;
Nucleopolyhedrovirus|Rep: DNA-binding protein - Bombyx
mori nuclear polyhedrosis virus (BmNPV)
Length = 65
Score = 40.7 bits (91), Expect = 0.012
Identities = 18/18 (100%), Positives = 18/18 (100%)
Frame = +1
Query: 28 MVYRRRRRSSTGATYGLT 81
MVYRRRRRSSTGATYGLT
Sbjct: 1 MVYRRRRRSSTGATYGLT 18
>UniRef50_UPI0000F1D641 Cluster: PREDICTED: similar to tenascin-R;
n=1; Danio rerio|Rep: PREDICTED: similar to tenascin-R -
Danio rerio
Length = 618
Score = 33.9 bits (74), Expect = 1.4
Identities = 16/38 (42%), Positives = 17/38 (44%)
Frame = -2
Query: 226 VNSSVXCNFGGLSMNGSWIFCMCEVYPGGXCNPSFCVC 113
VN S C G L + S IFC G C FCVC
Sbjct: 272 VNGSCQCRSGFLGEDCSLIFCANNCSQRGVCKEGFCVC 309
>UniRef50_Q5FVX1 Cluster: Habp2-prov protein; n=2; Xenopus
tropicalis|Rep: Habp2-prov protein - Xenopus tropicalis
(Western clawed frog) (Silurana tropicalis)
Length = 555
Score = 32.7 bits (71), Expect = 3.1
Identities = 22/81 (27%), Positives = 31/81 (38%), Gaps = 3/81 (3%)
Frame = -2
Query: 322 CRHDFVTVESQTRAGDEIASFLRTVGCVECLAVNSSVXCNFGG--LSMNGSWIFCMCEV- 152
CR+D V++ T F R C + + S C +G LS + C C+
Sbjct: 70 CRNDGTCVQTDTGYNCLCTEFFRGKNCEKSIHSCSEYTCQYGDCVLSRISPYYKCRCDYP 129
Query: 151 YPGGXCNPSFCVCV*YRLKNG 89
Y G C + C KNG
Sbjct: 130 YYGPTCRSAMAACHDNPCKNG 150
>UniRef50_Q9SY59 Cluster: F14N23.5; n=8; Magnoliophyta|Rep: F14N23.5
- Arabidopsis thaliana (Mouse-ear cress)
Length = 1188
Score = 32.3 bits (70), Expect = 4.1
Identities = 18/60 (30%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
Frame = -2
Query: 340 GLSLKSCRHDFVTV-ESQTRAGDEIASFLRTVGCVECLAVNSSVXCNFGGLSMNGSWIFC 164
G CRH + D F T+ C C + ++V C+ GG S NGS ++C
Sbjct: 754 GAPRTDCRHTCAALCHPSAPCPDLRCEFSVTITC-SCGRITATVPCDAGGRSANGSNVYC 812
>UniRef50_Q09AD1 Cluster: Putative uncharacterized protein; n=1;
Stigmatella aurantiaca DW4/3-1|Rep: Putative
uncharacterized protein - Stigmatella aurantiaca DW4/3-1
Length = 1129
Score = 31.5 bits (68), Expect = 7.2
Identities = 19/45 (42%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +2
Query: 47 VVLQP-VPHMV*HAGAVLQPVSHADAEARVTXAARVDLAHTEDPG 178
++LQP V H + HAG QP H RVT A++ TED G
Sbjct: 125 ILLQPRVTHPL-HAGMGAQPPRHRQRVLRVTLHAQLQRLQTEDEG 168
>UniRef50_A7IDZ7 Cluster: Putative uncharacterized protein; n=1;
Xanthobacter autotrophicus Py2|Rep: Putative
uncharacterized protein - Xanthobacter sp. (strain Py2)
Length = 469
Score = 31.1 bits (67), Expect = 9.6
Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 3/41 (7%)
Frame = +3
Query: 30 GLSSPSSFFNRCHIWFDTPAPFFSRYHT---QTQKLGLQXP 143
GL + SF +C+IWFD AP R + T +LG++ P
Sbjct: 389 GLVADWSFGGKCNIWFDYEAPDAPRLYKANYSTDELGVRDP 429
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 352,905,052
Number of Sequences: 1657284
Number of extensions: 6022742
Number of successful extensions: 15954
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 15616
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15949
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 19465676618
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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