Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120835.seq
         (416 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U50312-11|AAK71353.2| 1217|Caenorhabditis elegans Hypothetical p...    29   1.8  
AF038614-1|AAB92058.2| 1228|Caenorhabditis elegans Hypothetical ...    28   2.4  
Z98877-2|CAB11570.1|  907|Caenorhabditis elegans Hypothetical pr...    28   3.1  
Z99279-3|CAB16495.1|  298|Caenorhabditis elegans Hypothetical pr...    27   4.1  
AF039053-16|AAC25869.1|  497|Caenorhabditis elegans Cytochrome p...    27   4.1  
AF016683-8|AAM97998.1|  480|Caenorhabditis elegans Hypothetical ...    27   4.1  
Z70267-1|CAA94211.1|  307|Caenorhabditis elegans Hypothetical pr...    26   9.5  

>U50312-11|AAK71353.2| 1217|Caenorhabditis elegans Hypothetical
           protein B0222.9 protein.
          Length = 1217

 Score = 28.7 bits (61), Expect = 1.8
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = -2

Query: 202 FGGLSMNGSWIFCMCEVYPGGXCNPSF 122
           FGG   N SWI CMC +       P++
Sbjct: 708 FGGKVNNASWIACMCAIVAKKLNRPTY 734


>AF038614-1|AAB92058.2| 1228|Caenorhabditis elegans Hypothetical
           protein F15E6.6 protein.
          Length = 1228

 Score = 28.3 bits (60), Expect = 2.4
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = -2

Query: 202 FGGLSMNGSWIFCMCEVYPGGXCNPSFCV 116
           FGG   N SWI C+C V       P++ V
Sbjct: 740 FGGKLNNASWIACICSVVAKKLNRPTYGV 768


>Z98877-2|CAB11570.1|  907|Caenorhabditis elegans Hypothetical
           protein Y69H2.2 protein.
          Length = 907

 Score = 27.9 bits (59), Expect = 3.1
 Identities = 18/56 (32%), Positives = 25/56 (44%), Gaps = 2/56 (3%)
 Frame = -2

Query: 166 CMCE-VYPGGXC-NPSFCVCV*YRLKNGAGVSNHMWHRLKNDDGDDKPCLNCVISR 5
           C+CE ++ G  C NP    C      NG  V N  +++ K D  D     NC  S+
Sbjct: 328 CICEPLWTGPDCENPVASACTPNPCVNGTCVLNEQYNKYKCDCDDGFSGDNCEYSK 383


>Z99279-3|CAB16495.1|  298|Caenorhabditis elegans Hypothetical
           protein Y57G11A.3 protein.
          Length = 298

 Score = 27.5 bits (58), Expect = 4.1
 Identities = 16/50 (32%), Positives = 22/50 (44%)
 Frame = +2

Query: 152 DLAHTEDPGAVH*QAAEVTXHATINSQTFHTSDSTKERSDFVACPRLAFD 301
           ++AHT DP     Q  E   HA  + + F  S   K+    V C  L+ D
Sbjct: 251 EIAHTMDP-----QNTEEDEHAASDEEEFAVSSKPKQLQGVVKCEFLSLD 295


>AF039053-16|AAC25869.1|  497|Caenorhabditis elegans Cytochrome p450
           family protein 33C1 protein.
          Length = 497

 Score = 27.5 bits (58), Expect = 4.1
 Identities = 10/32 (31%), Positives = 17/32 (53%)
 Frame = +3

Query: 9   EITQFKHGLSSPSSFFNRCHIWFDTPAPFFSR 104
           E  + KH + SP+  F + HI+     P F++
Sbjct: 192 EYQELKHIIDSPAEIFGKLHIFLAMNIPIFAK 223


>AF016683-8|AAM97998.1|  480|Caenorhabditis elegans Hypothetical
           protein K09F6.10 protein.
          Length = 480

 Score = 27.5 bits (58), Expect = 4.1
 Identities = 11/33 (33%), Positives = 16/33 (48%)
 Frame = -1

Query: 323 LQTRFCNSRKPNEGRRRNRFVPSYCRMCGMSGC 225
           + T FC       GRR  +   + CR CG++ C
Sbjct: 328 VNTGFCFKCNQYSGRRHYQTCGAKCRRCGVTNC 360


>Z70267-1|CAA94211.1|  307|Caenorhabditis elegans Hypothetical
           protein K04C1.1 protein.
          Length = 307

 Score = 26.2 bits (55), Expect = 9.5
 Identities = 14/32 (43%), Positives = 15/32 (46%)
 Frame = +3

Query: 33  LSSPSSFFNRCHIWFDTPAPFFSRYHTQTQKL 128
           L + S FF R   W D   PF S   T TQ L
Sbjct: 234 LKNSSEFFERLVDWIDLLVPFASDALTLTQPL 265


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,352,208
Number of Sequences: 27780
Number of extensions: 152868
Number of successful extensions: 420
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 413
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 420
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 683806592
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)