Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120831.seq
         (695 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY524130-1|AAS17758.1|  211|Anopheles gambiae superoxide dismuta...    87   7e-19
AY745232-1|AAU93511.1|   75|Anopheles gambiae SOD3A protein.           71   4e-14
AY745233-1|AAU93512.1|  100|Anopheles gambiae SOD3B protein.           54   3e-09
DQ013848-1|AAY40257.1|  304|Anopheles gambiae CYP325D1 protein.        25   1.7  
AJ439060-5|CAD27756.1|  245|Anopheles gambiae putative deoxynucl...    23   7.0  
AF488801-1|AAO49462.1|  246|Anopheles gambiae multisubstrate deo...    23   7.0  

>AY524130-1|AAS17758.1|  211|Anopheles gambiae superoxide dismutase
           2 protein.
          Length = 211

 Score = 86.6 bits (205), Expect = 7e-19
 Identities = 36/74 (48%), Positives = 47/74 (63%)
 Frame = +1

Query: 22  VHGKIYFQQESANRPLKISGYLLNLPRGLHGFHVHEYGDTSNGCTSAGEHFNPTNEDHGA 201
           V G +   Q S   P+ I   ++ L  G HGFH+HE GD ++GC S G H+NP    HGA
Sbjct: 33  VSGNVTISQPSCTEPVFIDINVVGLTPGKHGFHIHEKGDLTDGCASTGGHYNPDKVSHGA 92

Query: 202 PDAEIRHVGDLGNI 243
           P+ ++RHVGDLGNI
Sbjct: 93  PNDQVRHVGDLGNI 106



 Score = 71.3 bits (167), Expect = 3e-14
 Identities = 29/60 (48%), Positives = 42/60 (70%)
 Frame = +3

Query: 258 NSLTEINMMDNVMSLYGPHNIIGRSLVVHTDKDDLGLTEHPLSKTTGNSDGRLGCGIIAI 437
           N + + +  D V+SLYG  ++IGR++V+H + DDLG T HP S  TGN+ GR+ CG+I I
Sbjct: 111 NGIAKTSYSDTVVSLYGARSVIGRAIVIHAEVDDLGKTNHPDSLKTGNAGGRVACGVIGI 170


>AY745232-1|AAU93511.1|   75|Anopheles gambiae SOD3A protein.
          Length = 75

 Score = 70.9 bits (166), Expect = 4e-14
 Identities = 30/62 (48%), Positives = 43/62 (69%)
 Frame = +3

Query: 258 NSLTEINMMDNVMSLYGPHNIIGRSLVVHTDKDDLGLTEHPLSKTTGNSDGRLGCGIIAI 437
           N   ++++    ++L G  N++GRSLVVH D DDLG+  H LSKTTG++  RL CG+I +
Sbjct: 13  NGEAKVDLTATQIALSGALNVVGRSLVVHADPDDLGVGGHELSKTTGDAGARLACGVIGL 72

Query: 438 CK 443
           CK
Sbjct: 73  CK 74


>AY745233-1|AAU93512.1|  100|Anopheles gambiae SOD3B protein.
          Length = 100

 Score = 54.4 bits (125), Expect = 3e-09
 Identities = 25/66 (37%), Positives = 39/66 (59%)
 Frame = +3

Query: 246 VGWYNSLTEINMMDNVMSLYGPHNIIGRSLVVHTDKDDLGLTEHPLSKTTGNSDGRLGCG 425
           V +   L +I + +  ++L G  +IIGR+L +   +DDLG  +H  SKTTGNS   + C 
Sbjct: 25  VAYSTGLAKIQIANKKLTLVGDRSIIGRTLSISEYEDDLGRGKHDYSKTTGNSGNCIACA 84

Query: 426 IIAICK 443
           II + +
Sbjct: 85  IIGVAR 90



 Score = 40.3 bits (90), Expect = 6e-05
 Identities = 17/29 (58%), Positives = 19/29 (65%)
 Frame = +1

Query: 172 FNPTNEDHGAPDAEIRHVGDLGNIKSVGT 258
           +NP   DHGAPD    HVGDLGNI +  T
Sbjct: 1   YNPDGNDHGAPDDANCHVGDLGNIVAYST 29


>DQ013848-1|AAY40257.1|  304|Anopheles gambiae CYP325D1 protein.
          Length = 304

 Score = 25.4 bits (53), Expect = 1.7
 Identities = 8/29 (27%), Positives = 16/29 (55%)
 Frame = +2

Query: 563 LNWLYEYNSTCKT*SRDDVICFSKTELAL 649
           ++W+Y++ + CK  S     C+S  +  L
Sbjct: 78  IDWVYKHTNNCKIESASRAACYSVVDKVL 106


>AJ439060-5|CAD27756.1|  245|Anopheles gambiae putative
           deoxynucleoside kinase protein.
          Length = 245

 Score = 23.4 bits (48), Expect = 7.0
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = -2

Query: 460 LKR*HHLHMAIIPHPKRPSELPVVLLN 380
           LK  H LH   + H   P   PV++LN
Sbjct: 174 LKELHELHENWLIHGASPRPAPVLVLN 200


>AF488801-1|AAO49462.1|  246|Anopheles gambiae multisubstrate
           deoxyribonucleoside kinaseprotein.
          Length = 246

 Score = 23.4 bits (48), Expect = 7.0
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = -2

Query: 460 LKR*HHLHMAIIPHPKRPSELPVVLLN 380
           LK  H LH   + H   P   PV++LN
Sbjct: 175 LKELHELHENWLIHGASPRPAPVLVLN 201


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 740,259
Number of Sequences: 2352
Number of extensions: 16619
Number of successful extensions: 25
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 70668195
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)