Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120830.seq
         (660 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061618-1|AAL29166.1|  775|Drosophila melanogaster SD08238p pro...    30   3.2  
AY057373-1|AAL25821.1|  481|Drosophila melanogaster innexin6 pro...    29   7.4  
AE014298-3002|AAF50922.1|  481|Drosophila melanogaster CG17063-P...    29   7.4  
AE014298-1265|AAF46439.1|  775|Drosophila melanogaster CG32707-P...    29   7.4  
BT001876-1|AAN71648.1|  507|Drosophila melanogaster SD10626p pro...    28   9.8  

>AY061618-1|AAL29166.1|  775|Drosophila melanogaster SD08238p
           protein.
          Length = 775

 Score = 29.9 bits (64), Expect = 3.2
 Identities = 12/44 (27%), Positives = 26/44 (59%)
 Frame = +2

Query: 401 SSCKILIPYSSSMAFTNLVDTLANTIHRDAITASPSETAISNFR 532
           S+CK+ +P+  +++     D + N I  DA++  P+E+   +F+
Sbjct: 506 SNCKLFVPHDVNLSLVQQRDKMFNAI--DAVSHKPTESISGSFK 547


>AY057373-1|AAL25821.1|  481|Drosophila melanogaster innexin6
           protein.
          Length = 481

 Score = 28.7 bits (61), Expect = 7.4
 Identities = 13/40 (32%), Positives = 22/40 (55%)
 Frame = -3

Query: 256 NQGQADFVGCLCHELGIYLIWVKVEACDGNC*WRFPLGEP 137
           ++ QAD+V   C  +G Y++  +V+  DG   W + L  P
Sbjct: 57  SERQADYVQSYCWTMGTYILPAEVDR-DGGSSWEYALYAP 95


>AE014298-3002|AAF50922.1|  481|Drosophila melanogaster CG17063-PA
           protein.
          Length = 481

 Score = 28.7 bits (61), Expect = 7.4
 Identities = 13/40 (32%), Positives = 22/40 (55%)
 Frame = -3

Query: 256 NQGQADFVGCLCHELGIYLIWVKVEACDGNC*WRFPLGEP 137
           ++ QAD+V   C  +G Y++  +V+  DG   W + L  P
Sbjct: 57  SERQADYVQSYCWTMGTYILPAEVDR-DGGSSWEYALYAP 95


>AE014298-1265|AAF46439.1|  775|Drosophila melanogaster CG32707-PA
           protein.
          Length = 775

 Score = 28.7 bits (61), Expect = 7.4
 Identities = 12/44 (27%), Positives = 25/44 (56%)
 Frame = +2

Query: 401 SSCKILIPYSSSMAFTNLVDTLANTIHRDAITASPSETAISNFR 532
           S+CK+ +P+  +++     D + N I  DA+   P+E+   +F+
Sbjct: 506 SNCKLFVPHDVNLSLVQQRDKMFNAI--DAVFHKPTESISGSFK 547


>BT001876-1|AAN71648.1|  507|Drosophila melanogaster SD10626p
           protein.
          Length = 507

 Score = 28.3 bits (60), Expect = 9.8
 Identities = 20/56 (35%), Positives = 29/56 (51%)
 Frame = +1

Query: 181 LQLLPISGKFQAHDINNQQSQLVPGSALSMAFTNLVDTLANTIHRDAITAPLVETA 348
           L ++PIS ++Q H   N+     P SAL+ A  +    LA ++  DA TA    TA
Sbjct: 89  LDVMPISRRYQVHPQPNRLGIRQPASALASAL-HATARLAASV--DAYTAAATATA 141


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,097,796
Number of Sequences: 53049
Number of extensions: 548553
Number of successful extensions: 1357
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1196
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1357
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2827453950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)