Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120830.seq
         (660 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g06960.2 68418.m00788 bZIP family transcription factor (OBF5)...    29   3.6  
At5g06960.1 68418.m00787 bZIP family transcription factor (OBF5)...    29   3.6  
At5g26570.1 68418.m03152 glycoside hydrolase starch-binding doma...    28   4.8  
At5g65510.1 68418.m08241 ovule development protein, putative sim...    28   6.3  
At5g01140.1 68418.m00018 hypothetical protein contains Pfam prof...    28   6.3  
At1g67035.1 68414.m07623 expressed protein ; expression supporte...    28   6.3  

>At5g06960.2 68418.m00788 bZIP family transcription factor (OBF5)
           identical to bZIP family transcription factor (OBF5)
           GI:414615 from [Arabidopsis thaliana]
          Length = 330

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 19/43 (44%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
 Frame = +1

Query: 184 QLLPISGKFQAHDINN-QQSQLVPGSALSMAFTNLVDTLANTI 309
           QL P++ + Q+ DINN QQS      ALS    NL  +LA+T+
Sbjct: 205 QLEPLTEQ-QSLDINNLQQSSQQAEDALSQGMDNLQQSLADTL 246


>At5g06960.1 68418.m00787 bZIP family transcription factor (OBF5)
           identical to bZIP family transcription factor (OBF5)
           GI:414615 from [Arabidopsis thaliana]
          Length = 330

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 19/43 (44%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
 Frame = +1

Query: 184 QLLPISGKFQAHDINN-QQSQLVPGSALSMAFTNLVDTLANTI 309
           QL P++ + Q+ DINN QQS      ALS    NL  +LA+T+
Sbjct: 205 QLEPLTEQ-QSLDINNLQQSSQQAEDALSQGMDNLQQSLADTL 246


>At5g26570.1 68418.m03152 glycoside hydrolase starch-binding
           domain-containing protein similar to SEX1 (starch
           excess) [Arabidopsis thaliana] GI:12044358; contains
           Pfam profile PF00686: Starch binding domain
          Length = 1191

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 16/53 (30%), Positives = 24/53 (45%)
 Frame = -1

Query: 480 WMVLARVSTKLVKAMLEE*GIKILHELGIYLIWVKLKLVTEIADGGFH*GSRY 322
           W  L  V   +V ++  E  +K L    IYL W+    +    DGG H  +R+
Sbjct: 263 WRKLEMVREVIVGSVEREERLKALIYSAIYLKWINTGQIPCFEDGGHHRPNRH 315


>At5g65510.1 68418.m08241 ovule development protein, putative
           similar to AINTEGUMENTA (GI:1209099) [Arabidopsis
           thaliana]
          Length = 437

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 15/32 (46%), Positives = 19/32 (59%)
 Frame = +1

Query: 172 RHKLQLLPISGKFQAHDINNQQSQLVPGSALS 267
           RHKL+L   S    + D N QQ QL+P S+ S
Sbjct: 353 RHKLKLALESPSSSSSDHNLQQQQLLPSSSPS 384


>At5g01140.1 68418.m00018 hypothetical protein contains Pfam profile
           PF05056: Protein of unknown function (DUF674)
          Length = 473

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 6/60 (10%)
 Frame = +1

Query: 127 DAITAPLVETAISNFRHKLQLLPISGKFQAHDINNQQS------QLVPGSALSMAFTNLV 288
           D I  P + ++  +   K Q+L    + QA  I+N  +       LV  SALS AF NL+
Sbjct: 392 DLIVTPKISSSTFSVLKKFQILTDDLEVQAITISNADALNLLGASLVTSSALSSAFGNLI 451


>At1g67035.1 68414.m07623 expressed protein ; expression supported
           by MPSS
          Length = 229

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 12/19 (63%), Positives = 14/19 (73%)
 Frame = -3

Query: 547 KLKLVTEIADGGFTRGSRY 491
           KLKL+ +  D GF RGSRY
Sbjct: 26  KLKLLVDNGDYGFERGSRY 44


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,235,733
Number of Sequences: 28952
Number of extensions: 265250
Number of successful extensions: 642
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 547
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 642
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1383534864
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)