Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120829.seq
         (668 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    22   5.2  
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    21   6.9  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    21   6.9  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    21   6.9  
AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory recept...    21   9.1  

>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 13/40 (32%), Positives = 19/40 (47%)
 Frame = +2

Query: 299 FTSKILLVTQDRWMMSFICAKLMSFFAHDYKHNQIMTHLF 418
           F+ + LL+   R + S  C+K +S     Y  N    HLF
Sbjct: 471 FSVEHLLMELSRAIDSVACSKTVSDGIRHYYVNVTFPHLF 510


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 10/44 (22%), Positives = 20/44 (45%)
 Frame = +1

Query: 394 QSNNDSFVFQN*TRFTSKILLVTRDXWDAVIMAQIFI*RATLLW 525
           Q      +F N T  T  + +++      +++AQ ++    LLW
Sbjct: 163 QVTGTPIIFHNLTLITYSLCVISWAVGIGIMLAQYYLQADMLLW 206


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = +1

Query: 376 CTRL*TQSNNDSFVFQ 423
           CTRL  +S   SFV Q
Sbjct: 409 CTRLNNESRKPSFVIQ 424


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 10/44 (22%), Positives = 20/44 (45%)
 Frame = +1

Query: 394 QSNNDSFVFQN*TRFTSKILLVTRDXWDAVIMAQIFI*RATLLW 525
           Q      +F N T  T  + +++      +++AQ ++    LLW
Sbjct: 163 QVTGTPIIFHNLTLITYSLCVISWAVGIGIMLAQYYLQADMLLW 206


>AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory receptor
           candidate 35 protein.
          Length = 251

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +1

Query: 391 TQSNNDSFVFQN 426
           TQ N+D F+F N
Sbjct: 144 TQQNSDVFIFDN 155


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,187
Number of Sequences: 336
Number of extensions: 3016
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17385535
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)