Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120829.seq
         (668 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_02_0220 - 6531255-6532667                                           28   5.9  
02_01_0102 - 749122-749799,750123-750371,750753-750851,751380-75...    28   7.7  

>03_02_0220 - 6531255-6532667
          Length = 470

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 13/30 (43%), Positives = 19/30 (63%), Gaps = 2/30 (6%)
 Frame = +3

Query: 579 MADCSALLTHITGHGLFPGRLFI*T--GGF 662
           M +  +LL  +TG G+ P R+F+ T  GGF
Sbjct: 277 MGEALSLLDRMTGRGVMPNRVFVRTLVGGF 306


>02_01_0102 - 749122-749799,750123-750371,750753-750851,751380-751889,
            752025-753905,754093-754296,754807-754899,755036-755122,
            755241-755328,755533-755645,755943-757259,757398-758672,
            759166-759273
          Length = 2233

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 16/41 (39%), Positives = 19/41 (46%)
 Frame = +3

Query: 36   KDDVICFSKLNDVICFSKLNWLYE*NSTCKTQSKNDVICRM 158
            K D      L+D IC S L   Y  NS+C  Q    + CRM
Sbjct: 1177 KVDCSALVTLSDAICHSALFVCYIVNSSCHLQESIVLRCRM 1217


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,325,686
Number of Sequences: 37544
Number of extensions: 266312
Number of successful extensions: 398
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 391
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 398
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1691314196
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)