Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120829.seq
         (668 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435325-1|ABD92640.1|  160|Apis mellifera OBP7 protein.               26   0.37 
AF393495-1|AAL60420.1|  136|Apis mellifera odorant binding prote...    23   3.5  
DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.          22   6.1  
AF393492-1|AAL60417.1|  136|Apis mellifera odorant binding prote...    22   6.1  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    21   8.0  

>DQ435325-1|ABD92640.1|  160|Apis mellifera OBP7 protein.
          Length = 160

 Score = 25.8 bits (54), Expect = 0.37
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = +3

Query: 15  STCKTQSKDDVICFSKLNDVICFSKL 92
           S C   +K    C + LN +ICFSKL
Sbjct: 116 SECINANKSTDKCENGLNFIICFSKL 141


>AF393495-1|AAL60420.1|  136|Apis mellifera odorant binding protein
           ASP4 protein.
          Length = 136

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 14/37 (37%), Positives = 18/37 (48%)
 Frame = +3

Query: 420 SKLNSLYE*NSTCNARSVGCCHNGPNFYIKGHFAMGN 530
           S L S+YE NS    + +GC       + K HF  GN
Sbjct: 35  SDLKSMYESNSEEQMKKLGCFE--ACVFQKLHFMDGN 69


>DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.
          Length = 495

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +2

Query: 224 KMMSSFTHDYNVFMY 268
           KM  +FT+ YN  MY
Sbjct: 252 KMAKAFTYTYNYSMY 266


>AF393492-1|AAL60417.1|  136|Apis mellifera odorant binding protein
           ASP4 protein.
          Length = 136

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 14/37 (37%), Positives = 17/37 (45%)
 Frame = +3

Query: 420 SKLNSLYE*NSTCNARSVGCCHNGPNFYIKGHFAMGN 530
           S L S+YE NS    +  GC       + K HF  GN
Sbjct: 35  SDLKSMYEANSEEQMKKFGCFE--ACVFQKLHFMDGN 69


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 7/20 (35%), Positives = 11/20 (55%)
 Frame = +2

Query: 329 DRWMMSFICAKLMSFFAHDY 388
           D W M  +C ++MS+    Y
Sbjct: 820 DVWSMGIVCWEVMSYGERPY 839


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,613
Number of Sequences: 438
Number of extensions: 2978
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20221290
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)