Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120826.seq
(683 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_O10372 Cluster: Occlusion-derived virus envelope protei... 91 2e-17
UniRef50_Q462F3 Cluster: Orf13; n=14; Nucleopolyhedrovirus|Rep: ... 77 4e-13
UniRef50_P41701 Cluster: Occlusion-derived virus envelope protei... 52 1e-05
UniRef50_O10370 Cluster: Uncharacterized 55.8 kDa protein; n=13;... 48 2e-04
UniRef50_Q0ILA6 Cluster: Odv-e27; n=2; Nucleopolyhedrovirus|Rep:... 46 0.001
UniRef50_Q8QL68 Cluster: ODV-E18; n=9; Nucleopolyhedrovirus|Rep:... 43 0.008
UniRef50_Q9YMV5 Cluster: LdOrf-odv-e18 peptide; n=5; Nucleopolyh... 41 0.024
UniRef50_Q1HH82 Cluster: Odv-e18; n=1; Antheraea pernyi nucleopo... 38 0.30
UniRef50_O10371 Cluster: Occlusion-derived virus envelope protei... 37 0.40
UniRef50_Q0N488 Cluster: P49; n=15; Nucleopolyhedrovirus|Rep: P4... 33 4.9
UniRef50_Q73ID1 Cluster: 60 kDa inner-membrane protein; n=4; Wol... 33 6.5
>UniRef50_O10372 Cluster: Occlusion-derived virus envelope protein
E27; n=12; Nucleopolyhedrovirus|Rep: Occlusion-derived
virus envelope protein E27 - Orgyia pseudotsugata
multicapsid polyhedrosis virus (OpMNPV)
Length = 297
Score = 91.5 bits (217), Expect = 2e-17
Identities = 48/91 (52%), Positives = 66/91 (72%)
Frame = +2
Query: 410 MKRVKCNKVRTVTEIVNSDEKIQKTYELAEFDLKI*AV*KAMKL*KLNWRSANTWAMLST 589
MKRV+CNKVRTVTE+ ++ KI+KTY+L EFDLK + ++ + K+ + AM++T
Sbjct: 1 MKRVRCNKVRTVTEVKPNNAKIRKTYDLNEFDLKNLSSLESFENTKVKLALSKYMAMINT 60
Query: 590 LEMTQPLLGIFRNQADTXXIAAVVFST*LFI 682
LEMTQPLL +FRN+ADT I AVV +T F+
Sbjct: 61 LEMTQPLLEVFRNRADTRQIVAVVQATMGFV 91
>UniRef50_Q462F3 Cluster: Orf13; n=14; Nucleopolyhedrovirus|Rep:
Orf13 - Trichoplusia ni SNPV
Length = 296
Score = 77.0 bits (181), Expect = 4e-13
Identities = 44/94 (46%), Positives = 60/94 (63%), Gaps = 3/94 (3%)
Frame = +2
Query: 410 MKRVKCN---KVRTVTEIVNSDEKIQKTYELAEFDLKI*AV*KAMKL*KLNWRSANTWAM 580
MKR KC KVRTVTEI+NSD+K+QK Y+L EFD+K ++ K+ AM
Sbjct: 1 MKRFKCQSTPKVRTVTEIINSDDKLQKEYDLTEFDVKNLNSLESYDTLKIKLVIVKYMAM 60
Query: 581 LSTLEMTQPLLGIFRNQADTXXIAAVVFST*LFI 682
L+TL++TQPLL IFR++ T I VV ++ F+
Sbjct: 61 LNTLQLTQPLLTIFRDRNATREIVTVVLASLGFV 94
>UniRef50_P41701 Cluster: Occlusion-derived virus envelope protein
E18; n=7; Nucleopolyhedrovirus|Rep: Occlusion-derived
virus envelope protein E18 - Autographa californica
nuclear polyhedrosis virus (AcMNPV)
Length = 62
Score = 52.0 bits (119), Expect = 1e-05
Identities = 22/23 (95%), Positives = 23/23 (100%)
Frame = +3
Query: 324 FMNPLNATMRANPFMNTPQRQML 392
F+NPLNATMRANPFMNTPQRQML
Sbjct: 40 FVNPLNATMRANPFMNTPQRQML 62
>UniRef50_O10370 Cluster: Uncharacterized 55.8 kDa protein; n=13;
Nucleopolyhedrovirus|Rep: Uncharacterized 55.8 kDa
protein - Orgyia pseudotsugata multicapsid polyhedrosis
virus (OpMNPV)
Length = 484
Score = 48.4 bits (110), Expect = 2e-04
Identities = 22/24 (91%), Positives = 23/24 (95%)
Frame = +3
Query: 3 SELKSLRDLNPWVQNTLLKLLIPD 74
SELKSLRDLNPWVQNTLL+LLI D
Sbjct: 448 SELKSLRDLNPWVQNTLLELLIVD 471
>UniRef50_Q0ILA6 Cluster: Odv-e27; n=2; Nucleopolyhedrovirus|Rep:
Odv-e27 - Leucania separata nuclear polyhedrosis virus
(LsNPV)
Length = 284
Score = 45.6 bits (103), Expect = 0.001
Identities = 32/87 (36%), Positives = 46/87 (52%), Gaps = 2/87 (2%)
Frame = +2
Query: 428 NKVRTVTEIVNSDEKIQKTYELAEFDLKI*AV*KAMKL*KLNWRS--ANTWAMLSTLEMT 601
NKVRTVTEIVN +K+ K +EL E + K + + N R A AML LE +
Sbjct: 5 NKVRTVTEIVNGHDKLTKEFELDELNDK--NLNSLVSYDNFNTRMVLAKYIAMLHMLETS 62
Query: 602 QPLLGIFRNQADTXXIAAVVFST*LFI 682
Q L+ FR++ I +V ++ F+
Sbjct: 63 QSLIATFRDRNAAREIVQIVHNSLAFV 89
>UniRef50_Q8QL68 Cluster: ODV-E18; n=9; Nucleopolyhedrovirus|Rep:
ODV-E18 - Mamestra configurata NPV-A
Length = 83
Score = 42.7 bits (96), Expect = 0.008
Identities = 18/23 (78%), Positives = 20/23 (86%)
Frame = +3
Query: 324 FMNPLNATMRANPFMNTPQRQML 392
F+NPLNATMRANPF+N QR ML
Sbjct: 61 FVNPLNATMRANPFVNPAQRNML 83
>UniRef50_Q9YMV5 Cluster: LdOrf-odv-e18 peptide; n=5;
Nucleopolyhedrovirus|Rep: LdOrf-odv-e18 peptide -
Lymantria dispar multicapsid nuclear polyhedrosis virus
(LdMNPV)
Length = 88
Score = 41.1 bits (92), Expect = 0.024
Identities = 17/23 (73%), Positives = 19/23 (82%)
Frame = +3
Query: 324 FMNPLNATMRANPFMNTPQRQML 392
+ NPLNATMRANPF+N QR ML
Sbjct: 66 YTNPLNATMRANPFVNNAQRSML 88
>UniRef50_Q1HH82 Cluster: Odv-e18; n=1; Antheraea pernyi
nucleopolyhedrovirus|Rep: Odv-e18 - Antheraea pernyi
nuclear polyhedrosis virus (ApNPV)
Length = 68
Score = 37.5 bits (83), Expect = 0.30
Identities = 20/52 (38%), Positives = 24/52 (46%)
Frame = +1
Query: 91 MIYXXXXXXXXXXXDVQSANYLNRLTPNMFLTXXXXXXXXXXXXMFVQSNSN 246
MIY D S NYLN+LTPN FL +F+QS+SN
Sbjct: 1 MIYTDPTTGATTNTDATSNNYLNKLTPNTFLIILAVVVIIALIVIFMQSSSN 52
>UniRef50_O10371 Cluster: Occlusion-derived virus envelope protein
E18; n=7; Nucleopolyhedrovirus|Rep: Occlusion-derived
virus envelope protein E18 - Orgyia pseudotsugata
multicapsid polyhedrosis virus (OpMNPV)
Length = 85
Score = 37.1 bits (82), Expect = 0.40
Identities = 20/52 (38%), Positives = 23/52 (44%)
Frame = +1
Query: 91 MIYXXXXXXXXXXXDVQSANYLNRLTPNMFLTXXXXXXXXXXXXMFVQSNSN 246
MIY D NYLNRLTPN FL +F+QS+SN
Sbjct: 1 MIYTDPATGATTNTDAAGNNYLNRLTPNTFLIILAVVVIVALIIIFMQSSSN 52
Score = 34.7 bits (76), Expect = 2.1
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = +3
Query: 333 PLNATMRANPFMNTPQR 383
PLN TMRANPF+ TPQR
Sbjct: 68 PLNTTMRANPFVATPQR 84
>UniRef50_Q0N488 Cluster: P49; n=15; Nucleopolyhedrovirus|Rep: P49 -
Clanis bilineata nucleopolyhedrosis virus
Length = 498
Score = 33.5 bits (73), Expect = 4.9
Identities = 17/23 (73%), Positives = 18/23 (78%), Gaps = 1/23 (4%)
Frame = +3
Query: 3 SELKSLRDL-NPWVQNTLLKLLI 68
S KSL +L N WVQNTLLKLLI
Sbjct: 447 SSFKSLHELKNSWVQNTLLKLLI 469
>UniRef50_Q73ID1 Cluster: 60 kDa inner-membrane protein; n=4;
Wolbachia|Rep: 60 kDa inner-membrane protein - Wolbachia
pipientis wMel
Length = 569
Score = 33.1 bits (72), Expect = 6.5
Identities = 16/56 (28%), Positives = 29/56 (51%)
Frame = -3
Query: 555 QFNFQSFIAF*TA*IFKSNSANS*VFWIFSSLFTISVTVRTLLHLTRFIFIHLSTT 388
Q N F+ + + IF S A ++WIFS++ T+ L LT+ + +++ T
Sbjct: 512 QVNVMKFLPYISVFIFSSFPAGLVIYWIFSNIITLIQQSLIKLFLTKKVVVNVENT 567
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 552,392,995
Number of Sequences: 1657284
Number of extensions: 9094708
Number of successful extensions: 17226
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 16768
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17217
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 53305790091
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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