Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120825.seq
         (692 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A2EQK4 Cluster: Surface antigen BspA-like; n=7; Trichom...    36   1.2  
UniRef50_A6AJL1 Cluster: Sensor protein; n=3; Vibrio|Rep: Sensor...    35   2.2  
UniRef50_Q833S8 Cluster: Transposase, IS256 family; n=6; Bacilli...    33   5.0  
UniRef50_Q7R806 Cluster: Putative peptidoglycan bound protein; n...    33   5.0  
UniRef50_A4VEI2 Cluster: Putative uncharacterized protein; n=1; ...    33   6.6  
UniRef50_Q1FFM2 Cluster: Aldose 1-epimerase; n=2; Clostridiales|...    33   8.8  

>UniRef50_A2EQK4 Cluster: Surface antigen BspA-like; n=7;
           Trichomonas vaginalis G3|Rep: Surface antigen BspA-like
           - Trichomonas vaginalis G3
          Length = 728

 Score = 35.5 bits (78), Expect = 1.2
 Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
 Frame = +1

Query: 394 FTNQSFN-CFVANIIFFPLYVESLSKHAFCVCILTKLQILQTKHVMHGYHKF 546
           F++  F  CF    +F P+Y+ S++ H F  CI  K   L  K    G H F
Sbjct: 504 FSSDIFRECFNLQSVFLPMYLTSIAPHCFYYCISLKYVDLPFKITSLGEHSF 555


>UniRef50_A6AJL1 Cluster: Sensor protein; n=3; Vibrio|Rep: Sensor
           protein - Vibrio harveyi HY01
          Length = 464

 Score = 34.7 bits (76), Expect = 2.2
 Identities = 17/52 (32%), Positives = 29/52 (55%)
 Frame = +1

Query: 433 IFFPLYVESLSKHAFCVCILTKLQILQTKHVMHGYHKFYKIYLVVYTYSVTI 588
           IFF +    L K    + I + L IL     +HG+H++ ++YLV+Y +  T+
Sbjct: 20  IFFAILFRDLRKSR--IAIASALPILALFGFIHGFHEWSELYLVMYEHEFTL 69


>UniRef50_Q833S8 Cluster: Transposase, IS256 family; n=6;
           Bacilli|Rep: Transposase, IS256 family - Enterococcus
           faecalis (Streptococcus faecalis)
          Length = 430

 Score = 33.5 bits (73), Expect = 5.0
 Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
 Frame = -2

Query: 580 QSMCIPPNKFYKIYDSRASHALFGGFE-AWLKYKHRTRVWK-DFQH 449
           + +C    KFY      A+HA FG F+  W  Y     VWK +F H
Sbjct: 279 KEVCRDMKKFYGASSLNAAHAAFGSFQNRWSHYSGAVDVWKRNFAH 324


>UniRef50_Q7R806 Cluster: Putative peptidoglycan bound protein; n=1;
           Plasmodium yoelii yoelii|Rep: Putative peptidoglycan
           bound protein - Plasmodium yoelii yoelii
          Length = 950

 Score = 33.5 bits (73), Expect = 5.0
 Identities = 30/97 (30%), Positives = 42/97 (43%), Gaps = 2/97 (2%)
 Frame = +3

Query: 51  IYILSNEENASQYYVGQQKCLKILVTIFYINYAII*NTEA*IL*VNECI*LYQHIYTRFL 230
           IY  S +EN   YYV     +K+     Y NY    N +     +N+ I L       ++
Sbjct: 398 IYFKSTKENVISYYVSIPNIIKL-----YFNYKKCLNNDIYKYFINKEISLSDGDNYNYM 452

Query: 231 GNSLYNP--RFFSKNILHQG**KRNLFYLLIKLYKVN 335
            + +YN    +F KNIL +   KRN     IK  K N
Sbjct: 453 SDEIYNNECEYFEKNILKKLFKKRNRKNYTIKHVKNN 489


>UniRef50_A4VEI2 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 223

 Score = 33.1 bits (72), Expect = 6.6
 Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 2/71 (2%)
 Frame = +1

Query: 394 FTNQSFNCFVA-NIIFFPLYV-ESLSKHAFCVCILTKLQILQTKHVMHGYHKFYKIYLVV 567
           F N +   F   ++IF  +Y  ES++   FC C+  KL    + H++H   +  +IY+  
Sbjct: 64  FPNHNCKFFQTYSLIFICIYFFESVTYFVFCRCLNVKL----SSHILHKCFQLIQIYIST 119

Query: 568 YTYSVTIDCEY 600
           +     I C Y
Sbjct: 120 FISIYCIKCSY 130


>UniRef50_Q1FFM2 Cluster: Aldose 1-epimerase; n=2;
           Clostridiales|Rep: Aldose 1-epimerase - Clostridium
           phytofermentans ISDg
          Length = 353

 Score = 32.7 bits (71), Expect = 8.8
 Identities = 14/49 (28%), Positives = 27/49 (55%)
 Frame = -2

Query: 592 NRLLQSMCIPPNKFYKIYDSRASHALFGGFEAWLKYKHRTRVWKDFQHT 446
           NR+ +++ +   K YK+  +  +H L  G + + K+ + T V+KD   T
Sbjct: 80  NRIAEALVVINGKEYKLEKNDGNHNLHSGSKGYNKFLYETEVFKDKDET 128


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 651,453,865
Number of Sequences: 1657284
Number of extensions: 12843123
Number of successful extensions: 27921
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 26925
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27914
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 54545459628
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)