Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120825.seq
         (692 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024881-9|AAK71410.1|  588|Caenorhabditis elegans Hypothetical ...    31   1.0  
Z92782-9|CAE17814.1|  329|Caenorhabditis elegans Hypothetical pr...    30   1.8  
Z77135-1|CAB00876.1|  362|Caenorhabditis elegans Hypothetical pr...    29   4.2  
U23521-2|AAC46815.2|  316|Caenorhabditis elegans Hypothetical pr...    29   4.2  
U23521-1|ABD63220.1|  348|Caenorhabditis elegans Hypothetical pr...    29   4.2  
U40959-5|AAA81769.1|  531|Caenorhabditis elegans Udp-glucuronosy...    28   5.5  
U40936-1|AAL65777.2|  770|Caenorhabditis elegans Hypothetical pr...    28   5.5  
AC024817-45|AAF59574.3|  432|Caenorhabditis elegans Hypothetical...    28   5.5  
AC090999-24|AAK26151.1|  502|Caenorhabditis elegans Hypothetical...    28   7.3  
U70858-4|AAB09178.1|  294|Caenorhabditis elegans Serpentine rece...    27   9.6  

>AC024881-9|AAK71410.1|  588|Caenorhabditis elegans Hypothetical
           protein Y97E10B.1 protein.
          Length = 588

 Score = 30.7 bits (66), Expect = 1.0
 Identities = 13/49 (26%), Positives = 24/49 (48%)
 Frame = +1

Query: 403 QSFNCFVANIIFFPLYVESLSKHAFCVCILTKLQILQTKHVMHGYHKFY 549
           +    F+ +  ++P    +L    F  CIL  ++I  T  V  G++KF+
Sbjct: 51  RELKAFITSAYYYPTSKSTLFSFQFLFCILNFMKIKITARVTAGHNKFF 99


>Z92782-9|CAE17814.1|  329|Caenorhabditis elegans Hypothetical
           protein F14F8.12 protein.
          Length = 329

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 19/89 (21%), Positives = 41/89 (46%)
 Frame = +1

Query: 409 FNCFVANIIFFPLYVESLSKHAFCVCILTKLQILQTKHVMHGYHKFYKIYLVVYTYSVTI 588
           F CF+ + +FF   +  L+   +   I   + I + +H+    H + + Y+ + ++ V  
Sbjct: 156 FECFIISFVFFNFVISVLTPFIY---IPIMIDINKNQHLHSQQHIYLQNYIFIQSFLVET 212

Query: 589 DCEYRFNVRPFLTRLNEKSY*KVMYFYLP 675
              ++  V P +   N  S+  V+  Y+P
Sbjct: 213 PI-FQIPV-PLVIGSNTNSFVTVVTLYIP 239


>Z77135-1|CAB00876.1|  362|Caenorhabditis elegans Hypothetical
           protein T16A9.2 protein.
          Length = 362

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 11/25 (44%), Positives = 18/25 (72%)
 Frame = -1

Query: 92  IILGCIFFIGKYVNGYMLIYSMCLF 18
           I++   F IG+ V+G++L  S+CLF
Sbjct: 270 ILINAFFGIGREVHGHILTVSICLF 294


>U23521-2|AAC46815.2|  316|Caenorhabditis elegans Hypothetical
           protein F41C3.8a protein.
          Length = 316

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
 Frame = -2

Query: 112 RHFCWPT*YWDAFSSLESM*MVTC*YI-QCVCLCV 11
           RH+C PT YW AF +  +  +  C  I   +CL +
Sbjct: 267 RHYCDPTIYWSAFFACTAFLIFYCVIIFLVICLLI 301


>U23521-1|ABD63220.1|  348|Caenorhabditis elegans Hypothetical
           protein F41C3.8b protein.
          Length = 348

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
 Frame = -2

Query: 112 RHFCWPT*YWDAFSSLESM*MVTC*YI-QCVCLCV 11
           RH+C PT YW AF +  +  +  C  I   +CL +
Sbjct: 299 RHYCDPTIYWSAFFACTAFLIFYCVIIFLVICLLI 333


>U40959-5|AAA81769.1|  531|Caenorhabditis elegans
           Udp-glucuronosyltransferase protein46 protein.
          Length = 531

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 18/60 (30%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
 Frame = +1

Query: 418 FVANIIFFPLYVESLSKHAFCVCILTKLQ--ILQTKHVMHGYHKFYKIYLVVYTYSVTID 591
           F A++   P Y E  +++ F V +LTKL+  +L  +   H  HKF + +  +Y+ +  +D
Sbjct: 187 FAADLSISPTYTER-ARNLF-VAVLTKLEFTLLNNRLQAHFQHKFGEHFPSLYSVTSDVD 244


>U40936-1|AAL65777.2|  770|Caenorhabditis elegans Hypothetical
           protein C13E3.1 protein.
          Length = 770

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 14/55 (25%), Positives = 26/55 (47%)
 Frame = +1

Query: 379 NSHHLFTNQSFNCFVANIIFFPLYVESLSKHAFCVCILTKLQILQTKHVMHGYHK 543
           N+  +  N   + F  N   F  + +  + + FC+CI  K   L+++ +MH   K
Sbjct: 481 NTEEMILNDDHDKFDLNTQCFK-FCQETNAYFFCICIRGKFIQLRSEELMHNVSK 534


>AC024817-45|AAF59574.3|  432|Caenorhabditis elegans Hypothetical
           protein Y54G2A.4 protein.
          Length = 432

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = -2

Query: 529 ASHALFGGFEAWLKYKHRTRVWKD 458
           A+  L+  FE+WL ++H TR + D
Sbjct: 134 ATSILYSAFESWLIFEHNTRGFSD 157


>AC090999-24|AAK26151.1|  502|Caenorhabditis elegans Hypothetical
           protein Y82E9BR.1 protein.
          Length = 502

 Score = 27.9 bits (59), Expect = 7.3
 Identities = 16/51 (31%), Positives = 24/51 (47%)
 Frame = -1

Query: 485 QTQNACLERLSTYNGKKIILATKQLKDWFVNKWCEFIYIRQTNHTKVSKLI 333
           +++ ACLER    NG +I  +   LK W + K+    Y   +    V K I
Sbjct: 433 KSRGACLERFKVENGGQISCSQCDLKFWEILKFNLHFYDNHSEWEIVEKPI 483


>U70858-4|AAB09178.1|  294|Caenorhabditis elegans Serpentine
           receptor, class x protein33 protein.
          Length = 294

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = +3

Query: 306 YLLIKLYKVNQFTYFGMISLPYINEFTPFIYKPIF 410
           Y+LI  Y+++  T+F      +I  F PF YK IF
Sbjct: 81  YVLIVCYEISIHTHFLSSVNRFIAVFFPFSYKNIF 115


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,645,505
Number of Sequences: 27780
Number of extensions: 331888
Number of successful extensions: 748
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 733
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 748
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1592382278
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)