Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120823.seq
(693 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;... 135 1e-30
UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2; En... 129 6e-29
UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861; ... 127 2e-28
UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498... 126 4e-28
UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181; ... 126 5e-28
UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941; ... 126 5e-28
UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;... 124 3e-27
UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI... 123 5e-27
UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179; ... 118 2e-25
UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1; Na... 112 7e-24
UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular or... 111 2e-23
UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2 pol... 110 3e-23
UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825; ... 109 6e-23
UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517; ... 106 4e-22
UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alp... 106 4e-22
UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3; Alphaproteob... 105 8e-22
UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa group|... 105 1e-21
UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9; Co... 103 3e-21
UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30; P... 101 2e-20
UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15; F... 99 5e-20
UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida stellata|... 99 1e-19
UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida stellata|... 99 1e-19
UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26; B... 98 2e-19
UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107; ... 97 3e-19
UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7; Eu... 97 4e-19
UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7; Ec... 95 1e-18
UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42; N... 93 4e-18
UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 89 7e-17
UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 87 5e-16
UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3; Th... 86 9e-16
UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5; Na... 84 3e-15
UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3; Bacteria|... 84 4e-15
UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48; O... 81 3e-14
UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4... 80 6e-14
UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase, sub... 79 1e-13
UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Eugl... 79 1e-13
UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126; ... 79 1e-13
UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 77 3e-13
UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106; ... 77 3e-13
UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16; c... 77 4e-13
UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI... 76 7e-13
UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1; M... 76 1e-12
UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2; Roseiflexus|... 75 1e-12
UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16; B... 75 2e-12
UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455; ... 75 2e-12
UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=... 74 4e-12
UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2; Cystobacteri... 73 5e-12
UniRef50_Q6RJT8 Cluster: Cytochrome c oxidase subunit 2; n=1; Ha... 73 9e-12
UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93; A... 73 9e-12
UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subuni... 72 1e-11
UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4 pre... 72 2e-11
UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 72 2e-11
UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5; Sulfol... 71 2e-11
UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI... 71 2e-11
UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol oxid... 71 3e-11
UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit... 71 4e-11
UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=... 69 8e-11
UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.... 69 8e-11
UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17; B... 69 1e-10
UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein; ... 69 1e-10
UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa gro... 68 2e-10
UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|R... 68 2e-10
UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2; Acidobacteri... 68 3e-10
UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;... 68 3e-10
UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5; P... 67 4e-10
UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacil... 66 1e-09
UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30; Proteobacte... 66 1e-09
UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=... 65 1e-09
UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) ... 65 1e-09
UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13; ... 65 2e-09
UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III ... 64 2e-09
UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobac... 64 3e-09
UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit ... 64 4e-09
UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase polype... 63 5e-09
UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1; Peri... 63 5e-09
UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|R... 62 9e-09
UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium... 62 1e-08
UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1; Bl... 62 2e-08
UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3; Rhodobacte... 61 2e-08
UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2; Rh... 61 2e-08
UniRef50_Q6TP93 Cluster: Cytochrome c oxidase subunit I; n=2; Br... 61 2e-08
UniRef50_P29649 Cluster: Cytochrome c oxidase subunit 1; n=441; ... 61 2e-08
UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15; Proteob... 60 7e-08
UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1; My... 59 1e-07
UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3; Proteobacter... 58 3e-07
UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Ae... 56 1e-06
UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1; Mu... 56 1e-06
UniRef50_Q9TCU2 Cluster: Cytochrome c oxidase subunit I; n=1; Ta... 55 1e-06
UniRef50_O99652 Cluster: Cytochrome c oxidase subunit I; n=1; Te... 55 2e-06
UniRef50_Q9XLV8 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 54 3e-06
UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2; D... 53 6e-06
UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1; Pl... 53 8e-06
UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1; Ap... 48 2e-04
UniRef50_Q9TAP9 Cluster: Cytochrome c oxidase subunit I; n=2; To... 48 2e-04
UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3; Ha... 48 3e-04
UniRef50_A2T428 Cluster: Putative uncharacterized protein ORF820... 47 4e-04
UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;... 47 4e-04
UniRef50_Q9TCV5 Cluster: Cytochrome c oxidase subunit I; n=6; Di... 46 0.001
UniRef50_Q4XXN6 Cluster: Putative uncharacterized protein; n=1; ... 43 0.006
UniRef50_Q6RCN4 Cluster: Cytochrome c oxidase subunit I; n=1; Bu... 43 0.008
UniRef50_Q8LX74 Cluster: Cytochrome c oxidase subunit I; n=1; Ch... 42 0.011
UniRef50_Q8LX82 Cluster: Cytochrome c oxidase subunit I; n=3; Ch... 42 0.014
UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388; ... 38 0.18
UniRef50_Q9MFX8 Cluster: Cytochrome oxidase I; n=5; Echinometra ... 38 0.31
UniRef50_Q9B9T9 Cluster: Cytochrome oxidase subunit 1; n=7; Locu... 37 0.41
UniRef50_Q8LX70 Cluster: Cytochrome c oxidase subunit I; n=4; Ch... 37 0.41
UniRef50_Q60AP6 Cluster: Putative membrane protein; n=1; Methylo... 37 0.54
UniRef50_O86945 Cluster: Sub-unit I of an aa3-type cytochrome ox... 37 0.54
UniRef50_Q2N1P8 Cluster: Cytochrome c oxidase subunit I; n=2; Eu... 37 0.54
UniRef50_O67937 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 36 0.71
UniRef50_A5URU0 Cluster: Cytochrome c oxidase, subunit I; n=4; C... 36 1.2
UniRef50_Q2Y5N3 Cluster: Integral membrane proteins containing u... 35 2.2
UniRef50_P98004 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) ... 34 2.9
UniRef50_Q8LX68 Cluster: Cytochrome oxidase I; n=2; Chaoborus|Re... 34 3.8
UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1; Wa... 33 6.6
UniRef50_Q9TAP7 Cluster: Cytochrome oxidase subunit 1; n=1; Clon... 33 8.8
>UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;
Bilateria|Rep: Cytochrome c oxidase subunit I - Cotesia
melitaearum (Parasitoid wasp)
Length = 499
Score = 135 bits (326), Expect = 1e-30
Identities = 61/77 (79%), Positives = 69/77 (89%)
Frame = +2
Query: 230 SIFIIIITTVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGF 409
+I +++ VLAGAIT+LLTDRN+NTSFFDP+GGGDPILYQHLF FFGHPEVYILILPGF
Sbjct: 176 AILLLLSLPVLAGAITMLLTDRNMNTSFFDPSGGGDPILYQHLFWFFGHPEVYILILPGF 235
Query: 410 GIISHIISQERGKKETF 460
GIISH+I E GKKETF
Sbjct: 236 GIISHMIFNESGKKETF 252
Score = 62.5 bits (145), Expect = 9e-09
Identities = 29/59 (49%), Positives = 38/59 (64%)
Frame = +1
Query: 430 FTRKRKKRNFWLFRNNLCYTSNWVIRIIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTG 606
F KK F + + + IV AHH+FT+G+D+DTRAYFTSAT+IIA+PTG
Sbjct: 243 FNESGKKETFGMLGMIYAMLTIGFLGFIVWAHHMFTIGMDVDTRAYFTSATMIIAIPTG 301
Score = 60.1 bits (139), Expect = 5e-08
Identities = 34/72 (47%), Positives = 39/72 (54%)
Frame = +3
Query: 18 GAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQ 197
G GTG TVYPPLS + H G SVDL IFSLHLAG SS + D+
Sbjct: 105 GVGTGWTVYPPLSLILGHGGMSVDLGIFSLHLAGASSIMGAVNFITTILNMRSNLFNMDK 164
Query: 198 LPLFV*AVGITA 233
+ LF +V ITA
Sbjct: 165 MSLFSWSVFITA 176
>UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2;
Endopterygota|Rep: Cytochrome c oxidase subunit I -
Copitarsia incommoda
Length = 150
Score = 129 bits (312), Expect = 6e-29
Identities = 62/104 (59%), Positives = 68/104 (65%)
Frame = +1
Query: 295 KLKYIIF*SCWRRRPNFISTFILIFWTS*SLYFNFTRIWYNFSYYFTRKRKKRNFWLFRN 474
K KYIIF S W F+STFILIFWT SLYFNFT IWYNFSYYF K KK N W+F +
Sbjct: 7 KFKYIIFWSSWSSWSYFMSTFILIFWTPSSLYFNFTSIWYNFSYYFPSKSKKGNLWVFSD 66
Query: 475 NLCYTSNWVIRIIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTG 606
NLCY SNW+I I + YFTSAT+IIAVPTG
Sbjct: 67 NLCYISNWIISIYCLSSSYIYSSNSYWYSTYFTSATMIIAVPTG 110
>UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861;
root|Rep: Cytochrome c oxidase subunit 1 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 516
Score = 127 bits (307), Expect = 2e-28
Identities = 56/77 (72%), Positives = 66/77 (85%)
Frame = +2
Query: 230 SIFIIIITTVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGF 409
++ +++ VLA IT+LLTDRNLNT+FFDPAGGGDPILYQHLF FFGHPEVYILILPGF
Sbjct: 192 AVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGF 251
Query: 410 GIISHIISQERGKKETF 460
GIISH+++ GKKE F
Sbjct: 252 GIISHVVAYYAGKKEPF 268
Score = 74.1 bits (174), Expect = 3e-12
Identities = 41/75 (54%), Positives = 45/75 (60%)
Frame = +3
Query: 9 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 188
VE GAGTG TVYPPL+ N+AH G SVDL IFSLHLAG+SS S
Sbjct: 118 VEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTTINMKPPTIS 177
Query: 189 FDQLPLFV*AVGITA 233
Q PLFV AV +TA
Sbjct: 178 QYQTPLFVWAVLVTA 192
Score = 61.3 bits (142), Expect = 2e-08
Identities = 26/36 (72%), Positives = 33/36 (91%)
Frame = +1
Query: 499 VIRIIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTG 606
++ IV AHH+FTVG+D+DTRAYFTSAT+IIA+PTG
Sbjct: 282 LLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTG 317
>UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498;
root|Rep: Cytochrome c oxidase subunit 1 - Homo sapiens
(Human)
Length = 513
Score = 126 bits (305), Expect = 4e-28
Identities = 56/77 (72%), Positives = 66/77 (85%)
Frame = +2
Query: 230 SIFIIIITTVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGF 409
++ +++ VLA IT+LLTDRNLNT+FFDPAGGGDPILYQHLF FFGHPEVYILILPGF
Sbjct: 192 AVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGF 251
Query: 410 GIISHIISQERGKKETF 460
G+ISHI++ GKKE F
Sbjct: 252 GMISHIVTYYSGKKEPF 268
Score = 70.5 bits (165), Expect = 4e-11
Identities = 40/77 (51%), Positives = 45/77 (58%)
Frame = +3
Query: 3 ARVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXX 182
A VE GAGTG TVYPPL+ N +H G SVDL IFSLHLAG+SS
Sbjct: 116 AMVEAGAGTGWTVYPPLAGNYSHPGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPA 175
Query: 183 XSFDQLPLFV*AVGITA 233
+ Q PLFV +V ITA
Sbjct: 176 MTQYQTPLFVWSVLITA 192
Score = 60.9 bits (141), Expect = 3e-08
Identities = 26/32 (81%), Positives = 31/32 (96%)
Frame = +1
Query: 511 IV*AHHIFTVGIDIDTRAYFTSATIIIAVPTG 606
IV AHH+FTVG+D+DTRAYFTSAT+IIA+PTG
Sbjct: 286 IVWAHHMFTVGMDVDTRAYFTSATMIIAIPTG 317
>UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181;
Coelomata|Rep: Cytochrome c oxidase subunit I - Piculus
rubiginosus
Length = 504
Score = 126 bits (304), Expect = 5e-28
Identities = 55/77 (71%), Positives = 66/77 (85%)
Frame = +2
Query: 230 SIFIIIITTVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGF 409
++ +++ VLA IT+LLTDRNLNT+FFDPAGGGDPILYQHLF FFGHPEVYILILPGF
Sbjct: 193 AVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGF 252
Query: 410 GIISHIISQERGKKETF 460
G+ISH+++ GKKE F
Sbjct: 253 GMISHVVTYYAGKKEPF 269
Score = 75.4 bits (177), Expect = 1e-12
Identities = 43/75 (57%), Positives = 46/75 (61%)
Frame = +3
Query: 9 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 188
VE GAGTG TVYPPL+ N+AH G SVDLAIFSLHLAGISS S
Sbjct: 119 VEAGAGTGWTVYPPLAGNLAHAGASVDLAIFSLHLAGISSILGAINFITTAINMKPPAIS 178
Query: 189 FDQLPLFV*AVGITA 233
Q PLFV +V ITA
Sbjct: 179 QYQTPLFVWSVLITA 193
>UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Ophisurus macrorhynchos
Length = 546
Score = 126 bits (304), Expect = 5e-28
Identities = 55/77 (71%), Positives = 66/77 (85%)
Frame = +2
Query: 230 SIFIIIITTVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGF 409
++ +++ VLA IT+LLTDRNLNT+FFDPAGGGDPILYQHLF FFGHPEVYILILPGF
Sbjct: 192 AVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGF 251
Query: 410 GIISHIISQERGKKETF 460
G+ISH+++ GKKE F
Sbjct: 252 GMISHVVTYYAGKKEPF 268
Score = 71.7 bits (168), Expect = 2e-11
Identities = 39/75 (52%), Positives = 45/75 (60%)
Frame = +3
Query: 9 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 188
VE GAGTG TVYPPL+ N+AH G SVDL IFSLHLAG+SS +
Sbjct: 118 VEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAIT 177
Query: 189 FDQLPLFV*AVGITA 233
Q PLFV +V +TA
Sbjct: 178 QYQTPLFVWSVLVTA 192
Score = 61.3 bits (142), Expect = 2e-08
Identities = 26/36 (72%), Positives = 33/36 (91%)
Frame = +1
Query: 499 VIRIIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTG 606
++ IV AHH+FTVG+D+DTRAYFTSAT+IIA+PTG
Sbjct: 282 LLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTG 317
>UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 527
Score = 124 bits (298), Expect = 3e-27
Identities = 57/72 (79%), Positives = 65/72 (90%), Gaps = 1/72 (1%)
Frame = +2
Query: 236 FIIIITT-VLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFG 412
F+++++ VLAGAIT+LLTDRN NT+FFDPAGGGDPILYQHLF FFGHPEVYILILPGFG
Sbjct: 196 FLLLLSLPVLAGAITMLLTDRNFNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFG 255
Query: 413 IISHIISQERGK 448
IISHI+S GK
Sbjct: 256 IISHIVSTFSGK 267
Score = 69.7 bits (163), Expect = 6e-11
Identities = 38/78 (48%), Positives = 47/78 (60%)
Frame = +3
Query: 3 ARVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXX 182
A VE G+GTG TVYPPLS +H G +VDLAIFSLHL+G+SS
Sbjct: 119 ALVEVGSGTGWTVYPPLSGITSHSGGAVDLAIFSLHLSGVSSILGSINFITTIFNMRGPG 178
Query: 183 XSFDQLPLFV*AVGITAF 236
+ +LPLFV +V +TAF
Sbjct: 179 MTMHRLPLFVWSVLVTAF 196
Score = 61.3 bits (142), Expect = 2e-08
Identities = 26/36 (72%), Positives = 33/36 (91%)
Frame = +1
Query: 499 VIRIIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTG 606
V+ +V AHH+FTVG+D+DTRAYFT+AT+IIAVPTG
Sbjct: 284 VLGFLVWAHHMFTVGLDVDTRAYFTAATMIIAVPTG 319
>UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI8
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI8 (EC
3.1.-.-)]; n=103; Eukaryota|Rep: Probable intron-encoded
endonuclease aI8 precursor [Contains: Truncated
non-functional cytochrome oxidase 1; Intron-encoded
endonuclease aI8 (EC 3.1.-.-)] - Ustilago maydis (Smut
fungus)
Length = 645
Score = 123 bits (296), Expect = 5e-27
Identities = 54/73 (73%), Positives = 64/73 (87%)
Frame = +2
Query: 230 SIFIIIITTVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGF 409
+I +++ VLAGAIT+LLTDRN NTSF+DPAGGGDPILYQHLF FFGHPEVYILI+PGF
Sbjct: 192 AILLLLSLPVLAGAITMLLTDRNFNTSFYDPAGGGDPILYQHLFWFFGHPEVYILIIPGF 251
Query: 410 GIISHIISQERGK 448
G++SHI+S GK
Sbjct: 252 GMVSHIVSAFSGK 264
Score = 71.3 bits (167), Expect = 2e-11
Identities = 40/77 (51%), Positives = 46/77 (59%)
Frame = +3
Query: 3 ARVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXX 182
A VE GAGTG TVYPPLS +H G SVDLAIFSLHL+GISS
Sbjct: 116 AFVEQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLHLSGISSMLGAMNFITTVLNMRNPG 175
Query: 183 XSFDQLPLFV*AVGITA 233
+ +LPLFV A+ +TA
Sbjct: 176 MTLHKLPLFVWAIFVTA 192
Score = 56.4 bits (130), Expect = 6e-07
Identities = 22/36 (61%), Positives = 32/36 (88%)
Frame = +1
Query: 499 VIRIIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTG 606
++ +V +HH++ VG+D+DTRAYFT+AT+IIAVPTG
Sbjct: 281 ILGFLVWSHHMYAVGLDVDTRAYFTAATMIIAVPTG 316
>UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Chondrus crispus (Carragheen)
Length = 532
Score = 118 bits (283), Expect = 2e-25
Identities = 52/68 (76%), Positives = 60/68 (88%)
Frame = +2
Query: 230 SIFIIIITTVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGF 409
+ +++ VLAGAIT+LLTDRN NTSFFD +GGGDPILYQHLF FFGHPEVYILILPGF
Sbjct: 200 AFLLLLAVPVLAGAITMLLTDRNFNTSFFDASGGGDPILYQHLFWFFGHPEVYILILPGF 259
Query: 410 GIISHIIS 433
G+ISHI+S
Sbjct: 260 GMISHIVS 267
Score = 66.9 bits (156), Expect = 4e-10
Identities = 37/78 (47%), Positives = 46/78 (58%)
Frame = +3
Query: 3 ARVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXX 182
A VE G GTG TVYPPLSS +H G +VDLAIFSLH++G SS
Sbjct: 124 ALVEVGVGTGWTVYPPLSSIQSHSGGAVDLAIFSLHISGASSILGAVNFISTILNMRSPG 183
Query: 183 XSFDQLPLFV*AVGITAF 236
S ++PLFV ++ +TAF
Sbjct: 184 QSMYRIPLFVWSILVTAF 201
Score = 60.9 bits (141), Expect = 3e-08
Identities = 26/36 (72%), Positives = 33/36 (91%)
Frame = +1
Query: 499 VIRIIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTG 606
V+ IV AHH++TVG+D+DTRAYFT+AT+IIAVPTG
Sbjct: 289 VLGFIVWAHHMYTVGLDVDTRAYFTAATMIIAVPTG 324
>UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1;
Naegleria gruberi|Rep: Cytochrome c oxidase subunit 1 -
Naegleria gruberi
Length = 633
Score = 112 bits (270), Expect = 7e-24
Identities = 52/77 (67%), Positives = 60/77 (77%)
Frame = +2
Query: 230 SIFIIIITTVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGF 409
S +I+ VLA AIT+LL DRN NTSF+DP GGGD +LYQHLF FFGHPEVYILILPGF
Sbjct: 196 SFLVIVAIPVLAAAITLLLFDRNFNTSFYDPVGGGDVVLYQHLFWFFGHPEVYILILPGF 255
Query: 410 GIISHIISQERGKKETF 460
G++SHII+ KK F
Sbjct: 256 GLVSHIIA-TFSKKRVF 271
Score = 62.5 bits (145), Expect = 9e-09
Identities = 35/75 (46%), Positives = 39/75 (52%)
Frame = +3
Query: 12 ENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSF 191
E G GTG TVYPPLSS +H G SVDL IFS HL GI S
Sbjct: 123 EGGPGTGWTVYPPLSSLQSHSGASVDLMIFSFHLVGIGSIVAAINFICTIFYYKNEAMFN 182
Query: 192 DQLPLFV*AVGITAF 236
LPLFV +V +T+F
Sbjct: 183 KDLPLFVWSVAVTSF 197
Score = 52.8 bits (121), Expect = 8e-06
Identities = 22/36 (61%), Positives = 30/36 (83%)
Frame = +1
Query: 499 VIRIIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTG 606
+I IV AHH++T GID T+AYFT+AT++IA+PTG
Sbjct: 285 LIGFIVWAHHMYTSGIDTSTKAYFTAATMVIAIPTG 320
>UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular
organisms|Rep: Cytochrome-c oxidase - Jannaschia sp.
(strain CCS1)
Length = 628
Score = 111 bits (266), Expect = 2e-23
Identities = 47/65 (72%), Positives = 58/65 (89%)
Frame = +2
Query: 239 IIIITTVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGII 418
+++ VLAGAIT+LLTDRN T+FFDPAGGGDPIL+QH+F FFGHPEVYI+ILP FG+I
Sbjct: 301 LLLSLPVLAGAITMLLTDRNFGTTFFDPAGGGDPILFQHIFWFFGHPEVYIVILPAFGVI 360
Query: 419 SHIIS 433
SHI++
Sbjct: 361 SHIVA 365
Score = 50.4 bits (115), Expect = 4e-05
Identities = 25/76 (32%), Positives = 40/76 (52%)
Frame = +3
Query: 9 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 188
++ GAG G T YPP+S+ R+VD AIF++H++G SS +
Sbjct: 224 IDGGAGPGWTFYPPISAQGVETSRAVDFAIFAVHVSGASSILGSINFITTFLNMRAPGMT 283
Query: 189 FDQLPLFV*AVGITAF 236
++PLF +V +TA+
Sbjct: 284 LHKVPLFAWSVFVTAW 299
Score = 44.4 bits (100), Expect = 0.003
Identities = 18/32 (56%), Positives = 26/32 (81%)
Frame = +1
Query: 511 IV*AHHIFTVGIDIDTRAYFTSATIIIAVPTG 606
+V AHH++TVG+ + +AYF AT++IAVPTG
Sbjct: 391 VVWAHHMYTVGMTLTQQAYFMVATMVIAVPTG 422
>UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2
polyprotein; n=1; Phaeosphaeria nodorum SN15|Rep:
Cytochrome oxidase subunits 1 and 2 polyprotein -
Phaeosphaeria nodorum SN15
Length = 789
Score = 110 bits (265), Expect = 3e-23
Identities = 50/73 (68%), Positives = 59/73 (80%)
Frame = +2
Query: 230 SIFIIIITTVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGF 409
++ +++ VLAG IT++LTDRN NTSFF+ AGGGDPILYQHLF FFGHPEVYILI+PGF
Sbjct: 193 AVLLLLSLPVLAGGITMVLTDRNFNTSFFEVAGGGDPILYQHLFWFFGHPEVYILIIPGF 252
Query: 410 GIISHIISQERGK 448
GIIS IS K
Sbjct: 253 GIISTTISANSNK 265
Score = 62.9 bits (146), Expect = 7e-09
Identities = 36/75 (48%), Positives = 41/75 (54%)
Frame = +3
Query: 9 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 188
+ENG GTG T+YPPLS +H G SVDLAIF LHL+GISS
Sbjct: 119 IENGVGTGWTLYPPLSGIQSHSGPSVDLAIFGLHLSGISSLLGAMNFMTTTFNMRSPGIR 178
Query: 189 FDQLPLFV*AVGITA 233
+L LF AV ITA
Sbjct: 179 LHKLILFAWAVVITA 193
Score = 59.3 bits (137), Expect = 9e-08
Identities = 23/36 (63%), Positives = 33/36 (91%)
Frame = +1
Query: 499 VIRIIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTG 606
++ +V +HH++TVG+D+DTRAYFT+AT+IIAVPTG
Sbjct: 282 ILGFVVWSHHMYTVGLDVDTRAYFTAATLIIAVPTG 317
>UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Paracoccidioides brasiliensis
Length = 710
Score = 109 bits (262), Expect = 6e-23
Identities = 50/73 (68%), Positives = 60/73 (82%)
Frame = +2
Query: 230 SIFIIIITTVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGF 409
++ +++ VLA AIT+LLTDRNLNTSF++ AGGGD ILYQHLF FFGHPEVYILI+PGF
Sbjct: 219 AVLLLLSLPVLAAAITMLLTDRNLNTSFYELAGGGDAILYQHLFWFFGHPEVYILIIPGF 278
Query: 410 GIISHIISQERGK 448
GIIS +IS K
Sbjct: 279 GIISTVISANSNK 291
Score = 58.4 bits (135), Expect = 2e-07
Identities = 23/36 (63%), Positives = 33/36 (91%)
Frame = +1
Query: 499 VIRIIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTG 606
++ IV +HH++TVG+D+DTRAYFT+AT+IIA+PTG
Sbjct: 308 LLGFIVWSHHMYTVGLDVDTRAYFTAATLIIAIPTG 343
Score = 58.0 bits (134), Expect = 2e-07
Identities = 34/77 (44%), Positives = 39/77 (50%)
Frame = +3
Query: 3 ARVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXX 182
A +ENG GTG T+YPPLS +H VDL IF LHL+GISS
Sbjct: 143 AIIENGVGTGWTLYPPLSGIQSHSSMGVDLGIFGLHLSGISSLLGAINFIATLLNMRSPG 202
Query: 183 XSFDQLPLFV*AVGITA 233
+L LF AV ITA
Sbjct: 203 IKLHKLALFGWAVVITA 219
>UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Schistosoma mansoni (Blood fluke)
Length = 609
Score = 106 bits (255), Expect = 4e-22
Identities = 45/66 (68%), Positives = 56/66 (84%)
Frame = +2
Query: 230 SIFIIIITTVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGF 409
S+ +++ VLA IT+LL DRN T+FF+P+GGGDPIL+QHLF FFGHPEVY+LILPGF
Sbjct: 282 SVLLLLSLPVLASGITMLLFDRNFGTAFFEPSGGGDPILFQHLFWFFGHPEVYVLILPGF 341
Query: 410 GIISHI 427
GI+SHI
Sbjct: 342 GIVSHI 347
Score = 39.1 bits (87), Expect = 0.10
Identities = 21/37 (56%), Positives = 24/37 (64%)
Frame = +3
Query: 18 GAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 128
G G G T+YPPLS G VD +FSLHLAG+SS
Sbjct: 217 GCGIGWTLYPPLSI-WEGSGFGVDYLMFSLHLAGVSS 252
Score = 39.1 bits (87), Expect = 0.10
Identities = 17/32 (53%), Positives = 22/32 (68%)
Frame = +1
Query: 511 IV*AHHIFTVGIDIDTRAYFTSATIIIAVPTG 606
+V HH+F VG D T +F+S T+II VPTG
Sbjct: 376 VVWGHHMFMVGFDSLTGVFFSSITMIIGVPTG 407
>UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alpha
precursor (DNA endonuclease I-SceIV) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI5 alpha (EC 3.1.-.-) (Intron-encoded
endonuclease I- SceIV)]; n=2; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI5 alpha precursor (DNA
endonuclease I-SceIV) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI5 alpha (EC 3.1.-.-) (Intron-encoded endonuclease I-
SceIV)] - Saccharomyces cerevisiae (Baker's yeast)
Length = 630
Score = 106 bits (255), Expect = 4e-22
Identities = 49/76 (64%), Positives = 62/76 (81%), Gaps = 1/76 (1%)
Frame = +2
Query: 236 FIIIITT-VLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFG 412
F+++++ VL+ IT+LL DRN NTSFF+ +GGGDPILY+HLF FFGHPEVYILI+PGFG
Sbjct: 194 FLLLLSLPVLSAGITMLLLDRNFNTSFFEVSGGGDPILYEHLFWFFGHPEVYILIIPGFG 253
Query: 413 IISHIISQERGKKETF 460
IISH++S KK F
Sbjct: 254 IISHVVS-TYSKKPVF 268
Score = 71.7 bits (168), Expect = 2e-11
Identities = 40/76 (52%), Positives = 46/76 (60%)
Frame = +3
Query: 9 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 188
VE+GAGTG TVYPPLSS AH G SVDLAIF+LHL ISS +
Sbjct: 119 VESGAGTGWTVYPPLSSIQAHSGPSVDLAIFALHLTSISSLLGAINFIVTTLNMRTNGMT 178
Query: 189 FDQLPLFV*AVGITAF 236
+LPLFV ++ ITAF
Sbjct: 179 MHKLPLFVWSIFITAF 194
Score = 54.4 bits (125), Expect = 3e-06
Identities = 22/36 (61%), Positives = 31/36 (86%)
Frame = +1
Query: 499 VIRIIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTG 606
++ +V +HH++ VG+D DTRAYFTSAT+IIA+PTG
Sbjct: 282 LLGFLVWSHHMYIVGLDADTRAYFTSATMIIAIPTG 317
>UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3;
Alphaproteobacteria|Rep: Cytochrome-c oxidase -
Sphingomonas sp. SKA58
Length = 556
Score = 105 bits (253), Expect = 8e-22
Identities = 47/68 (69%), Positives = 56/68 (82%)
Frame = +2
Query: 230 SIFIIIITTVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGF 409
+ +++ VLA AIT+LLTDRN T+F+D AGGGDP LYQHLF FFGHPEVYI+ILPGF
Sbjct: 235 AFLLLLALPVLAAAITMLLTDRNFGTTFYDAAGGGDPELYQHLFWFFGHPEVYIMILPGF 294
Query: 410 GIISHIIS 433
GIIS I+S
Sbjct: 295 GIISQIVS 302
Score = 55.6 bits (128), Expect = 1e-06
Identities = 32/74 (43%), Positives = 42/74 (56%)
Frame = +3
Query: 15 NGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFD 194
NGAGTG TVY PLS++ G +VD+AI SLH+AG SS +
Sbjct: 164 NGAGTGWTVYAPLSTS-GSAGPAVDMAILSLHIAGASSILGAINFITTILNMRAPGMTLH 222
Query: 195 QLPLFV*AVGITAF 236
++PLFV +V +TAF
Sbjct: 223 KMPLFVWSVLVTAF 236
Score = 50.0 bits (114), Expect = 5e-05
Identities = 19/36 (52%), Positives = 29/36 (80%)
Frame = +1
Query: 499 VIRIIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTG 606
V+ +V AHH+FT G+ ++ + YFT+AT++IAVPTG
Sbjct: 324 VVGFVVWAHHMFTTGMSVNVKMYFTAATMVIAVPTG 359
>UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa
group|Rep: Endonuclease - Saccharomyces servazzii
(Yeast)
Length = 675
Score = 105 bits (252), Expect = 1e-21
Identities = 49/76 (64%), Positives = 60/76 (78%), Gaps = 1/76 (1%)
Frame = +2
Query: 236 FIIIITT-VLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFG 412
F+++++ VL+ IT+LL DRN NTSFF+ AGGGDPI YQH F FFGHPEVYILI+PGFG
Sbjct: 194 FLLLLSLPVLSAGITMLLMDRNFNTSFFEVAGGGDPIFYQHAFWFFGHPEVYILIIPGFG 253
Query: 413 IISHIISQERGKKETF 460
I+SHI+S KK F
Sbjct: 254 IVSHIVS-TYSKKPVF 268
Score = 74.5 bits (175), Expect = 2e-12
Identities = 42/76 (55%), Positives = 46/76 (60%)
Frame = +3
Query: 9 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 188
VE+GAGTG TVYPPLSS AH G SVDLAIFSLHL ISS S
Sbjct: 119 VESGAGTGWTVYPPLSSIQAHSGPSVDLAIFSLHLTSISSLLGAINFIVTTLNMRTNGMS 178
Query: 189 FDQLPLFV*AVGITAF 236
++PLFV A+ ITAF
Sbjct: 179 MHKMPLFVWAIFITAF 194
Score = 54.4 bits (125), Expect = 3e-06
Identities = 22/36 (61%), Positives = 31/36 (86%)
Frame = +1
Query: 499 VIRIIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTG 606
++ +V +HH++ VG+D DTRAYFTSAT+IIA+PTG
Sbjct: 282 LLGFLVWSHHMYIVGLDADTRAYFTSATMIIAIPTG 317
>UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9;
Coelomata|Rep: Cytochrome c oxidase subunit I - Lingula
unguis
Length = 573
Score = 103 bits (248), Expect = 3e-21
Identities = 46/77 (59%), Positives = 57/77 (74%)
Frame = +2
Query: 230 SIFIIIITTVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGF 409
SI ++ VLA +T+LL DR+ +TSF+ P GGGDPIL+QHLF FFGHPEVYILILP F
Sbjct: 195 SILLVTSVPVLAAGLTLLLLDRHFSTSFYYPEGGGDPILWQHLFWFFGHPEVYILILPAF 254
Query: 410 GIISHIISQERGKKETF 460
G+ISHI+ + K F
Sbjct: 255 GVISHILCRSSAKLHVF 271
Score = 54.0 bits (124), Expect = 3e-06
Identities = 22/32 (68%), Positives = 28/32 (87%)
Frame = +1
Query: 511 IV*AHHIFTVGIDIDTRAYFTSATIIIAVPTG 606
+V HH+F G+DIDTRAYFT+AT++IAVPTG
Sbjct: 289 LVWGHHMFVAGLDIDTRAYFTAATLMIAVPTG 320
Score = 46.8 bits (106), Expect = 5e-04
Identities = 21/37 (56%), Positives = 28/37 (75%)
Frame = +3
Query: 18 GAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 128
G G G T+YPPLS++ G +DLA+FSLH+AG+SS
Sbjct: 123 GLGCGWTMYPPLSNSEFMDGLPIDLAVFSLHMAGMSS 159
>UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30;
Panarthropoda|Rep: Cytochrome c oxidase subunit I -
Pagyris cymothoe
Length = 487
Score = 101 bits (241), Expect = 2e-20
Identities = 45/56 (80%), Positives = 51/56 (91%)
Frame = +2
Query: 230 SIFIIIITTVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILI 397
++ +++ VLAGAIT+LLTDRNLNTSFFDPAGGGDPILYQHLF FFGHPEVYILI
Sbjct: 165 ALLLLLSLPVLAGAITMLLTDRNLNTSFFDPAGGGDPILYQHLFWFFGHPEVYILI 220
Score = 95.1 bits (226), Expect = 1e-18
Identities = 50/75 (66%), Positives = 52/75 (69%)
Frame = +3
Query: 9 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 188
VENGAGTG TVYPPLSSNIAH G SVDLAIFSLHLAGISS S
Sbjct: 91 VENGAGTGWTVYPPLSSNIAHGGSSVDLAIFSLHLAGISSILGAINFITTIINMRINKMS 150
Query: 189 FDQLPLFV*AVGITA 233
FDQ+PLF+ AVGITA
Sbjct: 151 FDQMPLFIWAVGITA 165
>UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Trichoderma reesei (Hypocrea jecorina)
Length = 635
Score = 99 bits (238), Expect = 5e-20
Identities = 45/59 (76%), Positives = 50/59 (84%)
Frame = +2
Query: 272 ITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGK 448
IT++LTDRN NTSFF+ AGGGDPIL+QHLF FFGHPEVYILI+PGFGIIS IS K
Sbjct: 232 ITMVLTDRNFNTSFFEVAGGGDPILFQHLFWFFGHPEVYILIIPGFGIISTTISSSSNK 290
Score = 59.3 bits (137), Expect = 9e-08
Identities = 34/70 (48%), Positives = 44/70 (62%), Gaps = 2/70 (2%)
Frame = +1
Query: 484 YTSNWVIR--IIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGN*NF*MTSYNTGNSN*L 657
Y WV R ++ HH++TVG+D+DTRAYFT+AT+IIAVPTG F + G S +
Sbjct: 334 YNFVWVNRKYLLTILHHMYTVGLDVDTRAYFTAATLIIAVPTGIKIFSWLATCYGGSIKM 393
Query: 658 *P*YL*RLGF 687
P L LGF
Sbjct: 394 TPVMLFSLGF 403
Score = 52.0 bits (119), Expect = 1e-05
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 4/46 (8%)
Frame = +3
Query: 3 ARVENGAGTG*TV----YPPLSSNIAHRGRSVDLAIFSLHLAGISS 128
A +E G GTG T+ YPPLS +H G SVDLAIF+LHL+G+SS
Sbjct: 145 AIIEGGVGTGWTLLKDKYPPLSGLQSHSGPSVDLAIFALHLSGVSS 190
>UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida
stellata|Rep: Cox1-i5 protein - Candida stellata (Yeast)
Length = 763
Score = 98.7 bits (235), Expect = 1e-19
Identities = 45/77 (58%), Positives = 58/77 (75%)
Frame = +2
Query: 230 SIFIIIITTVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGF 409
++ II+ VLA +T+LL DRN NTSFF +GGGDP+LY+H+F FFGHPEVYILI+P F
Sbjct: 210 AVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHIFWFFGHPEVYILIVPVF 269
Query: 410 GIISHIISQERGKKETF 460
G++S I+ Q KK F
Sbjct: 270 GVVSQIV-QVYAKKPIF 285
Score = 62.5 bits (145), Expect = 9e-09
Identities = 31/75 (41%), Positives = 45/75 (60%)
Frame = +3
Query: 9 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 188
++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G+SS
Sbjct: 136 IDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAINLMVTIINMRANGMD 195
Query: 189 FDQLPLFV*AVGITA 233
+ +LPLFV +V ITA
Sbjct: 196 YSKLPLFVWSVLITA 210
Score = 51.2 bits (117), Expect = 2e-05
Identities = 19/30 (63%), Positives = 28/30 (93%)
Frame = +1
Query: 520 AHHIFTVGIDIDTRAYFTSATIIIAVPTGN 609
+HH+FTVG+D D+RAYF+ A++IIA+PTG+
Sbjct: 306 SHHMFTVGLDADSRAYFSGASLIIAIPTGS 335
>UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida
stellata|Rep: Cox1-i4 protein - Candida stellata (Yeast)
Length = 676
Score = 98.7 bits (235), Expect = 1e-19
Identities = 45/77 (58%), Positives = 58/77 (75%)
Frame = +2
Query: 230 SIFIIIITTVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGF 409
++ II+ VLA +T+LL DRN NTSFF +GGGDP+LY+H+F FFGHPEVYILI+P F
Sbjct: 210 AVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHIFWFFGHPEVYILIVPVF 269
Query: 410 GIISHIISQERGKKETF 460
G++S I+ Q KK F
Sbjct: 270 GVVSQIV-QVYAKKPIF 285
Score = 62.5 bits (145), Expect = 9e-09
Identities = 31/75 (41%), Positives = 45/75 (60%)
Frame = +3
Query: 9 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 188
++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G+SS
Sbjct: 136 IDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAINLMVTIINMRANGMD 195
Query: 189 FDQLPLFV*AVGITA 233
+ +LPLFV +V ITA
Sbjct: 196 YSKLPLFVWSVLITA 210
>UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26;
Bilateria|Rep: Cytochrome c oxidase subunit I - Samia
cynthia ricini (Indian eri silkmoth)
Length = 510
Score = 97.9 bits (233), Expect = 2e-19
Identities = 52/76 (68%), Positives = 53/76 (69%)
Frame = +3
Query: 9 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 188
VENGAGTG TVYPPLSSNIAH G SVDLAIFSLHLAGISS S
Sbjct: 115 VENGAGTGWTVYPPLSSNIAHGGSSVDLAIFSLHLAGISSILGAINFITTIINMRMNNLS 174
Query: 189 FDQLPLFV*AVGITAF 236
FDQ+PLFV AVGITAF
Sbjct: 175 FDQMPLFVWAVGITAF 190
Score = 89.8 bits (213), Expect = 5e-17
Identities = 40/51 (78%), Positives = 48/51 (94%), Gaps = 1/51 (1%)
Frame = +2
Query: 236 FIIIITT-VLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEV 385
F+++++ VLAGAIT+LLTDRNLNTSFFDPAGGGDPILYQHLF FFGHP++
Sbjct: 190 FLLLLSLPVLAGAITMLLTDRNLNTSFFDPAGGGDPILYQHLFWFFGHPKL 240
>UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107;
Alveolata|Rep: Cytochrome c oxidase subunit 1 -
Plasmodium falciparum
Length = 476
Score = 97.5 bits (232), Expect = 3e-19
Identities = 42/65 (64%), Positives = 51/65 (78%)
Frame = +2
Query: 239 IIIITTVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGII 418
+++ VL G + +LL+D + NT FFDP GDPILYQHLF FFGHPEVYILILP FG+I
Sbjct: 201 LLLTLPVLTGGVLMLLSDLHFNTLFFDPTFAGDPILYQHLFWFFGHPEVYILILPAFGVI 260
Query: 419 SHIIS 433
SH+IS
Sbjct: 261 SHVIS 265
Score = 52.8 bits (121), Expect = 8e-06
Identities = 20/36 (55%), Positives = 30/36 (83%)
Frame = +1
Query: 499 VIRIIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTG 606
V+ +V HH++T G+++DTRAYFTS TI+I++PTG
Sbjct: 287 VLGSLVWVHHMYTTGLEVDTRAYFTSTTILISIPTG 322
Score = 36.7 bits (81), Expect = 0.54
Identities = 18/40 (45%), Positives = 28/40 (70%), Gaps = 1/40 (2%)
Frame = +3
Query: 12 ENGAGTG*TVYPPLSSNIAHRGR-SVDLAIFSLHLAGISS 128
E G GTG T+YPPLS+++ +VD+ IF L ++G++S
Sbjct: 124 EFGGGTGWTLYPPLSTSLMSLSPVAVDVIIFGLLVSGVAS 163
>UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7;
Eukaryota|Rep: Cytochrome c oxidase subunit 1 -
Leishmania tarentolae (Sauroleishmania tarentolae)
Length = 549
Score = 97.1 bits (231), Expect = 4e-19
Identities = 42/67 (62%), Positives = 54/67 (80%)
Frame = +2
Query: 230 SIFIIIITTVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGF 409
+I +II VLAG +T++L DRN NTSF+D GGGD IL+QH+F FFGHPEVYI++LP F
Sbjct: 195 AILLIITLPVLAGGVTLILCDRNFNTSFYDVVGGGDLILFQHIFWFFGHPEVYIILLPVF 254
Query: 410 GIISHII 430
G+IS I+
Sbjct: 255 GLISTIV 261
Score = 45.2 bits (102), Expect = 0.002
Identities = 17/35 (48%), Positives = 27/35 (77%)
Frame = +1
Query: 499 VIRIIV*AHHIFTVGIDIDTRAYFTSATIIIAVPT 603
++ + V AHH+F VG+D+D+RAYF +I+I +PT
Sbjct: 284 ILGMFVWAHHMFVVGMDVDSRAYFGGVSILIGLPT 318
Score = 38.3 bits (85), Expect = 0.18
Identities = 25/74 (33%), Positives = 31/74 (41%)
Frame = +3
Query: 12 ENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSF 191
E G G G T+YP L H + D +F++HL GISS SF
Sbjct: 122 EEGMGVGWTLYPTLICIDFHSSLACDFVMFAVHLLGISSILNSINLLGTLFCCRRKFFSF 181
Query: 192 DQLPLFV*AVGITA 233
LF+ A ITA
Sbjct: 182 LSWSLFIWAALITA 195
>UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7;
Echinoida|Rep: Cytochrome c oxidase subunit I -
Echinometra oblonga
Length = 386
Score = 95.1 bits (226), Expect = 1e-18
Identities = 41/55 (74%), Positives = 47/55 (85%)
Frame = +2
Query: 296 NLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETF 460
N T+FFDPAGGGD IL+QHLF FFGHPEVYILILPGFG+ISH+I+ GK+E F
Sbjct: 191 NYYTTFFDPAGGGDXILFQHLFXFFGHPEVYILILPGFGMISHVIAHYSGKREPF 245
Score = 60.9 bits (141), Expect = 3e-08
Identities = 26/36 (72%), Positives = 33/36 (91%)
Frame = +1
Query: 499 VIRIIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTG 606
V+ +V AHH+FTVG+D+DTRAYFT+AT+IIAVPTG
Sbjct: 259 VLGFLVWAHHMFTVGMDVDTRAYFTAATMIIAVPTG 294
>UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42;
Nematoda|Rep: Cytochrome c oxidase subunit I -
Onchocerca volvulus
Length = 548
Score = 93.5 bits (222), Expect = 4e-18
Identities = 40/67 (59%), Positives = 51/67 (76%)
Frame = +2
Query: 230 SIFIIIITTVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGF 409
S +++ VLAG++ LL DRN NTSF+D GG+P+LYQHLF FFGHPEVY++ILP F
Sbjct: 202 SFLLVLSVPVLAGSLLFLLLDRNFNTSFYDTKKGGNPLLYQHLFWFFGHPEVYVIILPVF 261
Query: 410 GIISHII 430
GIIS +
Sbjct: 262 GIISEAV 268
Score = 49.6 bits (113), Expect = 7e-05
Identities = 21/47 (44%), Positives = 34/47 (72%), Gaps = 2/47 (4%)
Frame = +1
Query: 469 RNNLCYTSNW--VIRIIV*AHHIFTVGIDIDTRAYFTSATIIIAVPT 603
+ ++ + S W V+ V HH++T G+DIDTR YF++AT+IIA+P+
Sbjct: 280 QTSMTFASIWIAVLGTSVWGHHMYTAGLDIDTRTYFSAATMIIAIPS 326
Score = 33.1 bits (72), Expect = 6.6
Identities = 22/76 (28%), Positives = 30/76 (39%)
Frame = +3
Query: 9 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 188
+ G G+ T YPPLS S+D I LH GI S +
Sbjct: 129 IGGGPGSSWTFYPPLSVE-GQPELSLDTMILGLHTVGIGSLLGAINFMVTTQNMRSTAVT 187
Query: 189 FDQLPLFV*AVGITAF 236
DQ+ +FV +T+F
Sbjct: 188 LDQISMFVWTSYLTSF 203
>UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1;
Dicyema misakiense|Rep: Cytochrome c oxidase subunit I -
Dicyema misakiense
Length = 473
Score = 89.4 bits (212), Expect = 7e-17
Identities = 40/74 (54%), Positives = 53/74 (71%)
Frame = +2
Query: 209 CMSCRDYSIFIIIITTVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVY 388
C S S+ +++ VLA IT++LTD++L T F+D GGDP+LYQHLF FFGHPEVY
Sbjct: 169 CWSIVLVSLLLVLSLPVLAVGITLILTDKHLGTCFYDATMGGDPLLYQHLFWFFGHPEVY 228
Query: 389 ILILPGFGIISHII 430
++ILP FG+ S I
Sbjct: 229 VVILPVFGLFSSSI 242
Score = 57.2 bits (132), Expect = 4e-07
Identities = 26/43 (60%), Positives = 34/43 (79%)
Frame = +1
Query: 478 LCYTSNWVIRIIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTG 606
L S +I +V AHH++T G+DIDTR+YFT+AT+IIAVPTG
Sbjct: 258 LAMASIALIGSVVWAHHMYTAGLDIDTRSYFTAATMIIAVPTG 300
Score = 36.7 bits (81), Expect = 0.54
Identities = 20/36 (55%), Positives = 24/36 (66%)
Frame = +3
Query: 21 AGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 128
A G T YPPLSS SV+ ++FSLHLAGI+S
Sbjct: 112 ASAGWTFYPPLSS----LSPSVEFSVFSLHLAGIAS 143
>UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1);
n=59; Cyanobacteria|Rep: Cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1) -
Synechocystis sp. (strain PCC 6803)
Length = 551
Score = 86.6 bits (205), Expect = 5e-16
Identities = 39/74 (52%), Positives = 51/74 (68%)
Frame = +2
Query: 209 CMSCRDYSIFIIIITTVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVY 388
C + S I++ T VLA A+ +L D TSFF+P GGGDP++YQHLF F+ HP VY
Sbjct: 196 CWAMLATSSLILLSTPVLASALILLSFDLIAGTSFFNPVGGGDPVVYQHLFWFYSHPAVY 255
Query: 389 ILILPGFGIISHII 430
I+ILP FG+IS +I
Sbjct: 256 IMILPFFGVISEVI 269
Score = 37.1 bits (82), Expect = 0.41
Identities = 17/33 (51%), Positives = 23/33 (69%)
Frame = +1
Query: 508 IIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTG 606
+IV AHH+FT G R +F + T++IAVPTG
Sbjct: 295 LIVWAHHMFTSGTPGWLRMFFMATTMLIAVPTG 327
>UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3;
Theileria|Rep: Cytochrome c oxidase subunit 1 -
Theileria parva
Length = 481
Score = 85.8 bits (203), Expect = 9e-16
Identities = 36/68 (52%), Positives = 49/68 (72%)
Frame = +2
Query: 230 SIFIIIITTVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGF 409
S +++ V+ ++ DR+ NT FF+ + GDP+LYQHLF FFGHPEVYI+ILPGF
Sbjct: 198 SFLLLLSLPVVTAVFLMVFLDRHYNTMFFESSNSGDPVLYQHLFWFFGHPEVYIMILPGF 257
Query: 410 GIISHIIS 433
GIIS ++S
Sbjct: 258 GIISLLLS 265
Score = 40.7 bits (91), Expect = 0.033
Identities = 20/40 (50%), Positives = 30/40 (75%)
Frame = +3
Query: 9 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 128
+E G+GTG T+YPPLS+++++ G +D IF L AGI+S
Sbjct: 126 LEIGSGTGWTLYPPLSTSLSNVG--IDFIIFGLLAAGIAS 163
>UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5;
Naupactini|Rep: Cytochrome c oxidase subunit I -
Galapaganus collaris
Length = 406
Score = 84.2 bits (199), Expect = 3e-15
Identities = 37/49 (75%), Positives = 43/49 (87%)
Frame = +2
Query: 230 SIFIIIITTVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH 376
+I +++ VLAGAIT+LLTDRN+NTSFFDPAGGGDPILYQHLF F GH
Sbjct: 111 AILLLLSLPVLAGAITMLLTDRNINTSFFDPAGGGDPILYQHLFWFXGH 159
Score = 72.9 bits (171), Expect = 7e-12
Identities = 40/75 (53%), Positives = 46/75 (61%)
Frame = +3
Query: 9 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 188
VE GAGTG TV PPLS+NIAH G SVDLAIFSLH+AG+ S +
Sbjct: 37 VEKGAGTGWTVSPPLSANIAHEGSSVDLAIFSLHMAGVXSILGAINFISTVLNMRPSGMT 96
Query: 189 FDQLPLFV*AVGITA 233
++PLFV AV ITA
Sbjct: 97 PXRMPLFVWAVEITA 111
>UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3;
Bacteria|Rep: Cytochrome caa3 oxidase - Planctomyces
maris DSM 8797
Length = 754
Score = 83.8 bits (198), Expect = 4e-15
Identities = 38/67 (56%), Positives = 48/67 (71%)
Frame = +2
Query: 230 SIFIIIITTVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGF 409
+I II+ L A+ +LL DR L ++FFDP GG +L+QH F FGHPEVYILILPGF
Sbjct: 211 AILIILALPALNSALAMLLIDRWLGSAFFDPTRGGSAVLWQHYFWIFGHPEVYILILPGF 270
Query: 410 GIISHII 430
G+IS +I
Sbjct: 271 GMISEVI 277
Score = 33.9 bits (74), Expect = 3.8
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = +1
Query: 520 AHHIFTVGIDIDTRAYFTSATIIIAVPTG 606
AHH+F VG+ + +F +++IA+PTG
Sbjct: 307 AHHMFAVGLGMYADIFFAVGSLLIAIPTG 335
>UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48;
Oligohymenophorea|Rep: Cytochrome c oxidase subunit 1 -
Tetrahymena pyriformis
Length = 698
Score = 80.6 bits (190), Expect = 3e-14
Identities = 36/68 (52%), Positives = 48/68 (70%)
Frame = +2
Query: 248 ITTVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHI 427
IT VL A+ ++ DR+ T+FF+ A GGDPIL QHLF FFGHPEVY+LI+P FG I+ I
Sbjct: 359 ITPVLGAAVIMMAFDRHWQTTFFEYAYGGDPILSQHLFWFFGHPEVYVLIIPTFGFINMI 418
Query: 428 ISQERGKK 451
+ ++
Sbjct: 419 VPHNNTRR 426
>UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4;
Halobacteriaceae|Rep: Cytochrome c oxidase polypeptide 1
- Halobacterium salinarium (Halobacterium halobium)
Length = 593
Score = 79.8 bits (188), Expect = 6e-14
Identities = 37/71 (52%), Positives = 49/71 (69%)
Frame = +2
Query: 239 IIIITTVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGII 418
I+ + A+ +LL DRN T+FF AGG DPI +QHLF FFGHPEVY+L+LP GI+
Sbjct: 250 ILFAFPLFGSALIMLLLDRNFGTTFFTVAGG-DPIFWQHLFWFFGHPEVYVLVLPPMGIV 308
Query: 419 SHIISQERGKK 451
S I+ + G+K
Sbjct: 309 SLILPKFSGRK 319
Score = 32.7 bits (71), Expect = 8.8
Identities = 14/35 (40%), Positives = 23/35 (65%)
Frame = +1
Query: 499 VIRIIV*AHHIFTVGIDIDTRAYFTSATIIIAVPT 603
V+ V AHH+FT GID R+ F + ++ I++P+
Sbjct: 335 VLSFGVWAHHMFTTGIDPRIRSSFMAVSLAISIPS 369
>UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase,
subunit I; n=2; Halobacteriaceae|Rep: Cytochrome-c-like
terminal oxidase, subunit I - Haloquadratum walsbyi
(strain DSM 16790)
Length = 634
Score = 79.0 bits (186), Expect = 1e-13
Identities = 39/71 (54%), Positives = 50/71 (70%)
Frame = +2
Query: 239 IIIITTVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGII 418
I+ +L AI +LL DRN TSFF AG G IL+QHLF FFGHPEVYI++LP GII
Sbjct: 282 ILFAFPLLGSAIMMLLFDRNFGTSFF--AGEGGAILWQHLFWFFGHPEVYIIVLPPMGII 339
Query: 419 SHIISQERGKK 451
S+I+ + G++
Sbjct: 340 SYILPRFSGRR 350
Score = 32.7 bits (71), Expect = 8.8
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = +1
Query: 499 VIRIIV*AHHIFTVGIDIDTRAYFTSATIIIAVPT 603
V+ V AHH+F G+D RA F + ++ IAVP+
Sbjct: 366 VLSFGVWAHHMFATGLDPRLRASFMAVSLAIAVPS 400
>UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Euglena
gracilis|Rep: Cytochrome oxidase subunit I - Euglena
gracilis
Length = 495
Score = 78.6 bits (185), Expect = 1e-13
Identities = 38/68 (55%), Positives = 50/68 (73%)
Frame = +2
Query: 230 SIFIIIITTVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGF 409
SI +I +L AIT LL DRN+N++ +D G DP+LYQHLF FFGHPEVY++ILP F
Sbjct: 204 SILLIGSLPILGVAITGLLLDRNINSTIYDVIG--DPVLYQHLFWFFGHPEVYVIILPVF 261
Query: 410 GIISHIIS 433
G+ S I++
Sbjct: 262 GLTSLILT 269
Score = 52.4 bits (120), Expect = 1e-05
Identities = 23/41 (56%), Positives = 31/41 (75%)
Frame = +1
Query: 481 CYTSNWVIRIIV*AHHIFTVGIDIDTRAYFTSATIIIAVPT 603
C S V+ V AHH+FTVG+DID+R+YF+ AT II++PT
Sbjct: 285 CIISIGVVGYFVWAHHMFTVGLDIDSRSYFSIATSIISIPT 325
Score = 33.5 bits (73), Expect = 5.0
Identities = 16/35 (45%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Frame = +3
Query: 27 TG*TVYPPLSSNIAHR-GRSVDLAIFSLHLAGISS 128
+G T+YPPLS+ A G ++DL++ +H+ GISS
Sbjct: 135 SGWTLYPPLSTRDADNIGVNIDLSLLVVHVLGISS 169
>UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Placozoan sp. BZ2423
Length = 498
Score = 78.6 bits (185), Expect = 1e-13
Identities = 35/48 (72%), Positives = 41/48 (85%)
Frame = +2
Query: 230 SIFIIIITTVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 373
+I +++ VLAGAIT+LLTDR NT+FFDPAGGGDPILYQHLF FFG
Sbjct: 193 AILLLLSLPVLAGAITMLLTDRYFNTTFFDPAGGGDPILYQHLFWFFG 240
Score = 70.9 bits (166), Expect = 3e-11
Identities = 39/75 (52%), Positives = 46/75 (61%)
Frame = +3
Query: 9 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 188
VE GAGTG TVYPPL+S AH G SVD+AIFSLHLAG+SS +
Sbjct: 119 VEQGAGTGWTVYPPLASIQAHSGGSVDMAIFSLHLAGLSSILGAMNFITTVMNMRTPGMT 178
Query: 189 FDQLPLFV*AVGITA 233
++PLFV +V ITA
Sbjct: 179 MSRIPLFVWSVLITA 193
Score = 56.0 bits (129), Expect = 8e-07
Identities = 28/50 (56%), Positives = 35/50 (70%)
Frame = +1
Query: 457 FWLFRNNLCYTSNWVIRIIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTG 606
FW F L V+ IV A H++ VG+D+DTRAYFT+AT+IIAVPTG
Sbjct: 236 FWFFGAMLAIG---VLGFIVWADHMYVVGMDVDTRAYFTAATMIIAVPTG 282
>UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 485
Score = 77.4 bits (182), Expect = 3e-13
Identities = 32/57 (56%), Positives = 44/57 (77%)
Frame = +2
Query: 260 LAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 430
LAGA+T+L D+ L T+FF+PA GGDP++YQ++F F+ HP VY+ +LP FG S II
Sbjct: 158 LAGAVTMLFLDKYLGTNFFNPAKGGDPLIYQNIFWFYSHPVVYVQVLPVFGFYSEII 214
Score = 34.3 bits (75), Expect = 2.9
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = +1
Query: 523 HHIFTVGIDIDTRAYFTSATIIIAVPTG 606
HH+F G+ TR F+ T++IAVPTG
Sbjct: 245 HHMFVSGVPNWTRVLFSYTTLLIAVPTG 272
>UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Homalopoma maculosa
Length = 219
Score = 77.4 bits (182), Expect = 3e-13
Identities = 34/44 (77%), Positives = 39/44 (88%)
Frame = +2
Query: 230 SIFIIIITTVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF 361
+I +++ VLAGAIT+LLTDRN NTSFFDPAGGGDPILYQHLF
Sbjct: 175 AILLLLSLPVLAGAITMLLTDRNFNTSFFDPAGGGDPILYQHLF 218
Score = 74.1 bits (174), Expect = 3e-12
Identities = 41/77 (53%), Positives = 46/77 (59%)
Frame = +3
Query: 3 ARVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXX 182
A VE+GAGTG TVYPPLS N AH G SVDLAIFSLHLAG+SS
Sbjct: 99 AAVESGAGTGWTVYPPLSGNTAHAGPSVDLAIFSLHLAGVSSILGAVNFITTVINMRWGA 158
Query: 183 XSFDQLPLFV*AVGITA 233
+ + LFV +V ITA
Sbjct: 159 MKIELVSLFVWSVKITA 175
>UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16;
cellular organisms|Rep: Cytochrome C oxidase subunit I -
Rhizobium loti (Mesorhizobium loti)
Length = 623
Score = 77.0 bits (181), Expect = 4e-13
Identities = 34/68 (50%), Positives = 47/68 (69%)
Frame = +2
Query: 230 SIFIIIITTVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGF 409
S +I+ + A T L+ DR + T FF+PA GGD +L+QHLF FFGHPEVYI+ LP
Sbjct: 208 SFLVILAMPAIMIASTSLILDRLVGTHFFNPAEGGDVLLWQHLFWFFGHPEVYIIFLPAV 267
Query: 410 GIISHIIS 433
G++S I++
Sbjct: 268 GMVSSIVA 275
>UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI5
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI5 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI5 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI5 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 536
Score = 76.2 bits (179), Expect = 7e-13
Identities = 33/44 (75%), Positives = 39/44 (88%)
Frame = +2
Query: 230 SIFIIIITTVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF 361
+I +++ VLAGAIT+LLTDRN NTSF+DPAGGGDPILYQHLF
Sbjct: 192 AILLLLSLPVLAGAITMLLTDRNFNTSFYDPAGGGDPILYQHLF 235
Score = 71.3 bits (167), Expect = 2e-11
Identities = 40/77 (51%), Positives = 46/77 (59%)
Frame = +3
Query: 3 ARVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXX 182
A VE GAGTG TVYPPLS +H G SVDLAIFSLHL+GISS
Sbjct: 116 AFVEQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLHLSGISSMLGAMNFITTVLNMRNPG 175
Query: 183 XSFDQLPLFV*AVGITA 233
+ +LPLFV A+ +TA
Sbjct: 176 MTLHKLPLFVWAIFVTA 192
>UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1;
Myxococcus xanthus DK 1622|Rep: Cytochrome c oxidase,
subunit I - Myxococcus xanthus (strain DK 1622)
Length = 556
Score = 75.8 bits (178), Expect = 1e-12
Identities = 31/66 (46%), Positives = 47/66 (71%), Gaps = 1/66 (1%)
Frame = +2
Query: 239 IIIITTVLAGAITILLTDRNL-NTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGI 415
I ++ T + G + +L+T NL FDPA GGDP+L+QHLF F+ HP VYI++LP FG+
Sbjct: 220 IQVLATPVIGLLLVLVTVENLFGFGMFDPARGGDPVLFQHLFWFYSHPAVYIMVLPSFGV 279
Query: 416 ISHIIS 433
+S +++
Sbjct: 280 MSEVVA 285
>UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2;
Roseiflexus|Rep: Cytochrome-c oxidase - Roseiflexus sp.
RS-1
Length = 641
Score = 75.4 bits (177), Expect = 1e-12
Identities = 39/66 (59%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Frame = +2
Query: 236 FIIIIT-TVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFG 412
FI+I VL A LL DR+ T FF P GGD +L+QHLF FFGHPEVYILILP G
Sbjct: 211 FILIFAFPVLTVATIQLLFDRHFGTRFFLPNLGGDAVLWQHLFWFFGHPEVYILILPTMG 270
Query: 413 IISHII 430
IIS ++
Sbjct: 271 IISEVL 276
Score = 37.1 bits (82), Expect = 0.41
Identities = 16/32 (50%), Positives = 23/32 (71%)
Frame = +1
Query: 511 IV*AHHIFTVGIDIDTRAYFTSATIIIAVPTG 606
+V AHH+F VG+ A+F +A+ +IAVPTG
Sbjct: 303 LVWAHHMFAVGLGPLANAFFGAASFLIAVPTG 334
>UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16;
Bacteria|Rep: Cytochrome c oxidase subunit I -
Synechococcus sp. (strain CC9311)
Length = 564
Score = 74.9 bits (176), Expect = 2e-12
Identities = 31/56 (55%), Positives = 39/56 (69%)
Frame = +2
Query: 260 LAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHI 427
L G +LL D + TSFF P GGGDP+L+QH F F+ HP VY+L+LP FGI S +
Sbjct: 228 LTGGAVMLLFDLSFGTSFFRPEGGGDPVLFQHFFWFYSHPAVYVLVLPVFGIFSEL 283
>UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455;
cellular organisms|Rep: Cytochrome c oxidase subunit I -
Pandaka lidwilli
Length = 507
Score = 74.5 bits (175), Expect = 2e-12
Identities = 42/75 (56%), Positives = 45/75 (60%)
Frame = +3
Query: 9 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 188
+E GAGTG TVYPPL+ N+AH G SVDL IFSLHLAGISS S
Sbjct: 107 IEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGISSILGAINFITTIMNMKPPAIS 166
Query: 189 FDQLPLFV*AVGITA 233
Q PLFV AV ITA
Sbjct: 167 QYQTPLFVWAVLITA 181
Score = 44.0 bits (99), Expect = 0.004
Identities = 18/31 (58%), Positives = 25/31 (80%)
Frame = +2
Query: 230 SIFIIIITTVLAGAITILLTDRNLNTSFFDP 322
++ +++ VLA IT+LLTDRNLNT+FFDP
Sbjct: 181 AVLLLLSLPVLAAGITMLLTDRNLNTTFFDP 211
>UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=4;
cellular organisms|Rep: Cytochrome C oxidase subunit I
/III - Pyrobaculum aerophilum
Length = 800
Score = 73.7 bits (173), Expect = 4e-12
Identities = 35/73 (47%), Positives = 49/73 (67%), Gaps = 5/73 (6%)
Frame = +2
Query: 233 IFIIIITTVLAGAITILLTDRNLNTSFF-----DPAGGGDPILYQHLF*FFGHPEVYILI 397
+ + + + AGAI +LL +R+L FF DPA GDP L+QH+F FFGHPEVYIL+
Sbjct: 199 LMVTALPPLAAGAIMLLL-ERHLGMHFFTPVPGDPAASGDPRLFQHIFWFFGHPEVYILV 257
Query: 398 LPGFGIISHIISQ 436
LP G++S +I +
Sbjct: 258 LPAMGLVSEVIQR 270
>UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2;
Cystobacterineae|Rep: Cytochrome-c oxidase -
Anaeromyxobacter sp. Fw109-5
Length = 596
Score = 73.3 bits (172), Expect = 5e-12
Identities = 36/73 (49%), Positives = 46/73 (63%), Gaps = 5/73 (6%)
Frame = +2
Query: 230 SIFIIIITTVLAGAITILLTDRNLNTSFFDPA-----GGGDPILYQHLF*FFGHPEVYIL 394
+I + VL A +LL DR+ T FF GGGDPIL+QHLF FGHPEVYI+
Sbjct: 225 AILNALFVPVLGSAALLLLLDRSFGTEFFVAGASAVRGGGDPILWQHLFWIFGHPEVYIM 284
Query: 395 ILPGFGIISHIIS 433
ILP +GI+ ++S
Sbjct: 285 ILPAWGILGDVLS 297
Score = 34.7 bits (76), Expect = 2.2
Identities = 19/71 (26%), Positives = 32/71 (45%)
Frame = +3
Query: 21 AGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQL 200
AG G T Y PLS+N+ G L + ++ + G+SS ++ +L
Sbjct: 155 AGAGWTTYTPLSTNVGMPGMGQTLVVAAIFVTGVSSTMGAVNYITTVIRLRAPGMTYMRL 214
Query: 201 PLFV*AVGITA 233
PL + + +TA
Sbjct: 215 PLTIWGLWLTA 225
>UniRef50_Q6RJT8 Cluster: Cytochrome c oxidase subunit 2; n=1;
Harmonia axyridis|Rep: Cytochrome c oxidase subunit 2 -
Harmonia axyridis (Multicolored Asian lady beetle)
Length = 193
Score = 72.5 bits (170), Expect = 9e-12
Identities = 29/53 (54%), Positives = 34/53 (64%)
Frame = +1
Query: 352 TFILIFWTS*SLYFNFTRIWYNFSYYFTRKRKKRNFWLFRNNLCYTSNWVIRI 510
+ ++IFW+S SLYFN IWYNF YY+T K K W F NNLCY S W I
Sbjct: 2 SLVMIFWSSSSLYFNSPSIWYNFPYYYTSKSGKNCLWFFSNNLCYISYWTSSI 54
>UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93;
Actinobacteria (class)|Rep: Cytochrome c oxidase subunit
1 - Corynebacterium glutamicum (Brevibacterium flavum)
Length = 584
Score = 72.5 bits (170), Expect = 9e-12
Identities = 35/67 (52%), Positives = 45/67 (67%)
Frame = +2
Query: 230 SIFIIIITTVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGF 409
S+ ++I +L A +L DR L +DPA GG +L+QHLF FFGHPEVY+L LP F
Sbjct: 218 SVLALLIFPLLLAAALGVLYDRKLGGHLYDPANGGS-LLWQHLFWFFGHPEVYVLALPFF 276
Query: 410 GIISHII 430
GI+S II
Sbjct: 277 GIVSEII 283
>UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Alternative cytochrome c oxidase
polypeptide I) (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=25; Bacteria|Rep: Alternative cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Alternative cytochrome c
oxidase polypeptide I) (Cytochrome BB3 subunit 1)
(Oxidase BB(3) subunit 1) - Bradyrhizobium japonicum
Length = 591
Score = 72.1 bits (169), Expect = 1e-11
Identities = 38/80 (47%), Positives = 49/80 (61%), Gaps = 10/80 (12%)
Frame = +2
Query: 239 IIIITTVLAGAITILLTDRNLNTSFFDPA----------GGGDPILYQHLF*FFGHPEVY 388
++ + G++ +LL DR L TSFF P GGG P+L+QHLF FFGHPEVY
Sbjct: 226 LLAFPALFVGSVMLLL-DRLLGTSFFMPTLVEMGQLSKYGGGSPLLFQHLFWFFGHPEVY 284
Query: 389 ILILPGFGIISHIISQERGK 448
I+ LP FGI+S +IS K
Sbjct: 285 IVALPAFGIVSDLISTHARK 304
>UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4
precursor (DNA endonuclease I- SceII) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI4 (EC 3.1.-.-) (Intron-encoded
endonuclease I-SceII)]; n=4; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI4 precursor (DNA
endonuclease I- SceII) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI4 (EC 3.1.-.-) (Intron-encoded endonuclease I-SceII)]
- Saccharomyces cerevisiae (Baker's yeast)
Length = 556
Score = 71.7 bits (168), Expect = 2e-11
Identities = 40/76 (52%), Positives = 46/76 (60%)
Frame = +3
Query: 9 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 188
VE+GAGTG TVYPPLSS AH G SVDLAIF+LHL ISS +
Sbjct: 119 VESGAGTGWTVYPPLSSIQAHSGPSVDLAIFALHLTSISSLLGAINFIVTTLNMRTNGMT 178
Query: 189 FDQLPLFV*AVGITAF 236
+LPLFV ++ ITAF
Sbjct: 179 MHKLPLFVWSIFITAF 194
Score = 68.5 bits (160), Expect = 1e-10
Identities = 31/56 (55%), Positives = 43/56 (76%), Gaps = 1/56 (1%)
Frame = +2
Query: 236 FIIIITT-VLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIL 400
F+++++ VL+ IT+LL DRN NTSFF+ +GGGDPILY+HLF FFG I++L
Sbjct: 194 FLLLLSLPVLSAGITMLLLDRNFNTSFFEVSGGGDPILYEHLFWFFGQTVATIIML 249
>UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Caa-3605 subunit 1) (Oxidase
aa(3) subunit 1); n=13; Bacillaceae|Rep: Cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase
polypeptide I) (Cytochrome aa3 subunit 1) (Caa-3605
subunit 1) (Oxidase aa(3) subunit 1) - Bacillus subtilis
Length = 622
Score = 71.7 bits (168), Expect = 2e-11
Identities = 31/67 (46%), Positives = 44/67 (65%)
Frame = +2
Query: 230 SIFIIIITTVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGF 409
S I+ L + +++ DR T+FF+P GG+ ++++HLF FGHPEVYILILP F
Sbjct: 201 SALILFAFPPLTVGLALMMLDRLFGTNFFNPELGGNTVIWEHLFWIFGHPEVYILILPAF 260
Query: 410 GIISHII 430
GI S +I
Sbjct: 261 GIFSEVI 267
Score = 34.3 bits (75), Expect = 2.9
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = +1
Query: 511 IV*AHHIFTVGIDIDTRAYFTSATIIIAVPTG 606
+V HH+FT G+ A F AT+ IA+PTG
Sbjct: 294 MVWVHHMFTTGLGPIANAIFAVATMAIAIPTG 325
>UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5;
Sulfolobaceae|Rep: Quinol oxidase subunit 1/3 -
Sulfolobus acidocaldarius
Length = 788
Score = 71.3 bits (167), Expect = 2e-11
Identities = 34/77 (44%), Positives = 47/77 (61%)
Frame = +2
Query: 230 SIFIIIITTVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGF 409
+I +II L + +R T FFD A GG P+L+Q LF FFGHPEVYILILP
Sbjct: 190 AILMIIAMPSLTAGLVFAYLERLWGTPFFDSALGGSPVLWQQLFWFFGHPEVYILILPAM 249
Query: 410 GIISHIISQERGKKETF 460
G++S ++ + ++E F
Sbjct: 250 GLVSELL-PKMARREIF 265
>UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI4
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI4 (EC
3.1.-.-)]; n=3; Basidiomycota|Rep: Probable
intron-encoded endonuclease aI4 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI4 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 530
Score = 71.3 bits (167), Expect = 2e-11
Identities = 40/77 (51%), Positives = 46/77 (59%)
Frame = +3
Query: 3 ARVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXX 182
A VE GAGTG TVYPPLS +H G SVDLAIFSLHL+GISS
Sbjct: 116 AFVEQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLHLSGISSMLGAMNFITTVLNMRNPG 175
Query: 183 XSFDQLPLFV*AVGITA 233
+ +LPLFV A+ +TA
Sbjct: 176 MTLHKLPLFVWAIFVTA 192
>UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol
oxidase, subunit 1; n=2; Thermoprotei|Rep:
Heme/copper-type cytochrome/quinol oxidase, subunit 1 -
Cenarchaeum symbiosum
Length = 508
Score = 70.9 bits (166), Expect = 3e-11
Identities = 30/67 (44%), Positives = 45/67 (67%)
Frame = +2
Query: 230 SIFIIIITTVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGF 409
S+ +++ A A+ +LLTDR + FF+PA GGDPI Y HLF F HPEVY+L++P
Sbjct: 194 SLIVLVALPTFAAALLMLLTDRLGVSGFFNPAVGGDPIAYAHLFWFTFHPEVYVLVIPAI 253
Query: 410 GIISHII 430
G++ ++
Sbjct: 254 GMMYEMV 260
>UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit I;
n=22; Bacteria|Rep: Cytochrome o ubiquinol oxidase,
subunit I - Chromobacterium violaceum
Length = 680
Score = 70.5 bits (165), Expect = 4e-11
Identities = 33/79 (41%), Positives = 49/79 (62%)
Frame = +2
Query: 215 SCRDYSIFIIIITTVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 394
+C ++ I +L GA+ +L DR L+ FF GG+ ++Y +LF +GHPEVYIL
Sbjct: 232 TCTWANVLIATSFPILTGALAMLALDRYLDFHFFTAELGGNAMMYLNLFWAWGHPEVYIL 291
Query: 395 ILPGFGIISHIISQERGKK 451
+LP FGI S ++S GK+
Sbjct: 292 VLPAFGIFSEVVSTFAGKR 310
Score = 37.9 bits (84), Expect = 0.23
Identities = 16/36 (44%), Positives = 24/36 (66%)
Frame = +1
Query: 499 VIRIIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTG 606
V+ +V HH FT+G + A+F AT+II++PTG
Sbjct: 326 VLGFMVWLHHFFTMGSGANVNAFFGIATMIISIPTG 361
>UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=38;
Bacteria|Rep: Cytochrome c oxidase subunit I type -
Anaeromyxobacter sp. Fw109-5
Length = 555
Score = 69.3 bits (162), Expect = 8e-11
Identities = 27/67 (40%), Positives = 42/67 (62%)
Frame = +2
Query: 230 SIFIIIITTVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGF 409
S+ I+ T VL ++ ++ + FDPA GGDP+L+QH F F+ HP VYI++LP
Sbjct: 211 SVIQILATPVLGMSLLLVAVEHAFGWGIFDPARGGDPVLFQHFFWFYSHPAVYIMVLPAM 270
Query: 410 GIISHII 430
+IS ++
Sbjct: 271 AVISEVV 277
>UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.-)
(Ubiquinol oxidase polypeptide I) (Cytochrome o subunit
1) (Oxidase BO(3) subunit 1); n=240; Bacteria|Rep:
Ubiquinol oxidase subunit 1 (EC 1.10.3.-) (Ubiquinol
oxidase polypeptide I) (Cytochrome o subunit 1) (Oxidase
BO(3) subunit 1) - Pseudomonas putida
Length = 672
Score = 69.3 bits (162), Expect = 8e-11
Identities = 32/79 (40%), Positives = 48/79 (60%)
Frame = +2
Query: 215 SCRDYSIFIIIITTVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 394
+C ++ I+ +L A+ +L DR L+ F GG+P++Y +LF +GHPEVYIL
Sbjct: 231 TCTWANVLIVASFPILTAALALLTVDRYLDFHIFTNELGGNPMMYVNLFWAWGHPEVYIL 290
Query: 395 ILPGFGIISHIISQERGKK 451
ILP FG+ S + S GK+
Sbjct: 291 ILPAFGVFSEVTSTFAGKR 309
Score = 34.7 bits (76), Expect = 2.2
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +1
Query: 499 VIRIIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTG 606
V+ V HH FT+G +F AT++I++PTG
Sbjct: 325 VLGFAVWLHHFFTMGAGASVNTFFGLATMLISIPTG 360
>UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17;
Bacteria|Rep: Cytochrome C oxidase subunit I -
Symbiobacterium thermophilum
Length = 628
Score = 68.5 bits (160), Expect = 1e-10
Identities = 33/67 (49%), Positives = 41/67 (61%)
Frame = +2
Query: 230 SIFIIIITTVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGF 409
S II + A+ +L+ DR +FF+ GG + YQHLF FGHPEVYILILP
Sbjct: 212 SAIIIFAFPSVTVALIMLMFDRTFAANFFEVLRGGSVVFYQHLFWTFGHPEVYILILPAM 271
Query: 410 GIISHII 430
GIIS +I
Sbjct: 272 GIISEVI 278
Score = 33.5 bits (73), Expect = 5.0
Identities = 14/29 (48%), Positives = 20/29 (68%)
Frame = +1
Query: 520 AHHIFTVGIDIDTRAYFTSATIIIAVPTG 606
+HH+FTVG+ + F+ T+ IAVPTG
Sbjct: 308 SHHMFTVGMGPVVNSIFSLTTMAIAVPTG 336
>UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein;
n=1; Saccharomyces castellii|Rep: I-SceII DNA
endonuclease-like protein - Saccharomyces castellii
(Yeast)
Length = 598
Score = 68.5 bits (160), Expect = 1e-10
Identities = 28/48 (58%), Positives = 38/48 (79%)
Frame = +2
Query: 230 SIFIIIITTVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 373
++ +++ VL+ +T+LL DRN NTSFF+ AGGGDPILY+HLF FFG
Sbjct: 193 AVLLLLTLPVLSAGVTMLLLDRNFNTSFFEVAGGGDPILYEHLFWFFG 240
Score = 68.1 bits (159), Expect = 2e-10
Identities = 38/75 (50%), Positives = 45/75 (60%)
Frame = +3
Query: 9 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 188
VE+GAGTG TVYPPL+S AH G SVDLAIF+LH+ ISS +
Sbjct: 119 VESGAGTGWTVYPPLASIQAHSGPSVDLAIFALHMTSISSLLGAINFIVTTLNMRTNGMT 178
Query: 189 FDQLPLFV*AVGITA 233
+LPLFV A+ ITA
Sbjct: 179 MHKLPLFVWAILITA 193
>UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa
group|Rep: COX1-i5 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 608
Score = 68.1 bits (159), Expect = 2e-10
Identities = 30/57 (52%), Positives = 42/57 (73%)
Frame = +2
Query: 230 SIFIIIITTVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIL 400
+I +++ VLA +T+ + DRN NTSFF+ AGGGD +LYQHLF ++ HPEV I+ L
Sbjct: 198 AILLLLSLPVLAAGLTMGIFDRNFNTSFFEYAGGGDAVLYQHLFYWWNHPEVKIICL 254
Score = 60.1 bits (139), Expect = 5e-08
Identities = 35/77 (45%), Positives = 42/77 (54%)
Frame = +3
Query: 3 ARVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXX 182
A VE GAGTG TVY PL+ +H G +VDLAIFSLHL+G SS
Sbjct: 122 ALVEAGAGTGWTVYFPLAGIQSHSGPAVDLAIFSLHLSGFSSLLGAINFITTFINMRTIG 181
Query: 183 XSFDQLPLFV*AVGITA 233
++ +PLF AV TA
Sbjct: 182 MKYENVPLFAWAVLFTA 198
>UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|Rep:
Cox-i3 protein - Candida stellata (Yeast)
Length = 588
Score = 68.1 bits (159), Expect = 2e-10
Identities = 31/59 (52%), Positives = 43/59 (72%), Gaps = 2/59 (3%)
Frame = +2
Query: 230 SIFIIIITTVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH--PEVYILIL 400
++ II+ VLA +T+LL DRN NTSFF +GGGDP+LY+H+F FFG P + I+I+
Sbjct: 210 AVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHIFWFFGQIWPIIIIIII 268
Score = 62.5 bits (145), Expect = 9e-09
Identities = 31/75 (41%), Positives = 45/75 (60%)
Frame = +3
Query: 9 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 188
++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G+SS
Sbjct: 136 IDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAINLMVTIINMRANGMD 195
Query: 189 FDQLPLFV*AVGITA 233
+ +LPLFV +V ITA
Sbjct: 196 YSKLPLFVWSVLITA 210
>UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2;
Acidobacteria|Rep: Cytochrome-c oxidase - Acidobacteria
bacterium (strain Ellin345)
Length = 595
Score = 67.7 bits (158), Expect = 3e-10
Identities = 37/78 (47%), Positives = 45/78 (57%), Gaps = 11/78 (14%)
Frame = +2
Query: 230 SIFIIIITTVLAGAITILLTDRNLNTSFFDPAG-----------GGDPILYQHLF*FFGH 376
S ++ VL A +L DR TSFF P+G GG +L+QHLF FFGH
Sbjct: 229 SCIALLAFAVLLPACILLCLDRVAGTSFFIPSGLVFNDHVIPHGGGSALLWQHLFWFFGH 288
Query: 377 PEVYILILPGFGIISHII 430
PEVYI ILP GI+SHI+
Sbjct: 289 PEVYIAILPAMGIVSHIL 306
>UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;
Aeropyrum pernix|Rep: Heme-copper oxidase subunit I+III
- Aeropyrum pernix
Length = 815
Score = 67.7 bits (158), Expect = 3e-10
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = +2
Query: 278 ILLTDRNLNTSFF-DPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGK 448
+LL DRNL T FF +PAGG +L+ HLF FFGHPEVYIL+ P G ++ +IS GK
Sbjct: 217 LLLLDRNLGTEFFLNPAGGA--LLWDHLFWFFGHPEVYILLFPALGAMADVISTFSGK 272
>UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5;
Proteobacteria|Rep: Cytochrome c oxidase, subunit I -
Mesorhizobium sp. (strain BNC1)
Length = 845
Score = 66.9 bits (156), Expect = 4e-10
Identities = 30/68 (44%), Positives = 43/68 (63%)
Frame = +2
Query: 227 YSIFIIIITTVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPG 406
++ I+I + A +L +R+ FF GGDP+L+QHLF FFGHPEVYI+ LP
Sbjct: 217 FAAMIMIAFPAVILATMLLEIERSFGWPFFTAERGGDPLLWQHLFWFFGHPEVYIIFLPA 276
Query: 407 FGIISHII 430
G++S I+
Sbjct: 277 AGLVSMIV 284
>UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacillus
flagellatus KT|Rep: Cytochrome-c oxidase -
Methylobacillus flagellatus (strain KT / ATCC 51484 /
DSM 6875)
Length = 631
Score = 65.7 bits (153), Expect = 1e-09
Identities = 33/67 (49%), Positives = 40/67 (59%)
Frame = +2
Query: 230 SIFIIIITTVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGF 409
S I+ L A +L DR FF A GDPIL+QHLF FFGHPEVYI+ +P
Sbjct: 215 SFMIVFALPPLVIASLMLALDRMAGMHFFT-AASGDPILWQHLFWFFGHPEVYIIFIPAL 273
Query: 410 GIISHII 430
G++S II
Sbjct: 274 GMVSSII 280
>UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30;
Proteobacteria|Rep: Cytochrome-c oxidase - Burkholderia
cenocepacia MC0-3
Length = 1004
Score = 65.7 bits (153), Expect = 1e-09
Identities = 29/64 (45%), Positives = 41/64 (64%)
Frame = +2
Query: 230 SIFIIIITTVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGF 409
S+ ++ ++ A +L DRN T FFD A GG P+L+QHLF F HP VY+++LP
Sbjct: 228 SVSNLVAVPSVSLAFLLLWLDRNAGTHFFDVAHGGRPLLWQHLFWMFAHPWVYVVVLPAM 287
Query: 410 GIIS 421
GI+S
Sbjct: 288 GIVS 291
>UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=1;
Beggiatoa sp. PS|Rep: Cytochrome c oxidase aa3, subunit
1 - Beggiatoa sp. PS
Length = 525
Score = 65.3 bits (152), Expect = 1e-09
Identities = 27/64 (42%), Positives = 41/64 (64%)
Frame = +2
Query: 242 IIITTVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIIS 421
+I VL A+T+L D+ + T FFD A GGD + YQ+LF F+ HP VY++ LP ++
Sbjct: 196 LIFVPVLGTAVTMLTFDKYIGTHFFDAAAGGDALTYQNLFWFYSHPAVYVIFLPFMAMVF 255
Query: 422 HIIS 433
I++
Sbjct: 256 EIVA 259
>UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1); n=45;
Bacillales|Rep: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1) - Bacillus
subtilis
Length = 649
Score = 65.3 bits (152), Expect = 1e-09
Identities = 32/67 (47%), Positives = 41/67 (61%)
Frame = +2
Query: 233 IFIIIITTVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFG 412
+ I+ VL A+ +L DR FF GG P+L+ +LF +GHPEVYI+ILP FG
Sbjct: 233 VIIVFAFPVLTVALALLSFDRLFGAHFFTLEAGGMPMLWANLFWIWGHPEVYIVILPAFG 292
Query: 413 IISHIIS 433
I S IIS
Sbjct: 293 IFSEIIS 299
Score = 35.1 bits (77), Expect = 1.6
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +1
Query: 499 VIRIIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTG 606
V+ +V HH FT+G ++F+ T+ I++PTG
Sbjct: 321 VLSFLVWTHHFFTMGNSASVNSFFSITTMAISIPTG 356
>UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13;
Bacteria|Rep: Cytochrome c oxidase, subunit I - Azoarcus
sp. (strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 607
Score = 64.9 bits (151), Expect = 2e-09
Identities = 29/68 (42%), Positives = 43/68 (63%)
Frame = +2
Query: 227 YSIFIIIITTVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPG 406
+++ I+ + A +L +R + FF GGDP+L+QHLF FFGHPEVYI+ LP
Sbjct: 276 FALMIVFAFPAVILATALLELERAFHWPFFAAHLGGDPLLWQHLFWFFGHPEVYIIFLPA 335
Query: 407 FGIISHII 430
G++S I+
Sbjct: 336 AGMVSMIV 343
>UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III (EC
1.9.3.1) (Cytochrome c aa(3) subunit 1); n=2; Thermus
thermophilus|Rep: Cytochrome c oxidase polypeptide I+III
(EC 1.9.3.1) (Cytochrome c aa(3) subunit 1) - Thermus
thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Length = 791
Score = 64.5 bits (150), Expect = 2e-09
Identities = 25/58 (43%), Positives = 40/58 (68%)
Frame = +2
Query: 260 LAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIIS 433
L A ++L +R + S+F+PA GGDP+L+Q F F+ HP VY+++LP GI++ + S
Sbjct: 212 LTAATLLVLLERKIGLSWFNPAVGGDPVLFQQFFWFYSHPTVYVMLLPYLGILAEVAS 269
Score = 33.1 bits (72), Expect = 6.6
Identities = 17/36 (47%), Positives = 22/36 (61%)
Frame = +1
Query: 499 VIRIIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTG 606
V+ +V AHH+FTVG + F T +IAVPTG
Sbjct: 291 VLGTMVWAHHMFTVGESTLFQIAFAFFTALIAVPTG 326
>UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobacter
shibae DFL 12|Rep: Cytochrome-c oxidase -
Dinoroseobacter shibae DFL 12
Length = 853
Score = 64.1 bits (149), Expect = 3e-09
Identities = 31/69 (44%), Positives = 44/69 (63%)
Frame = +2
Query: 242 IIITTVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIIS 421
I ++ G+I +L +R L FFD GGDP+L+QHLF FGHPEVYI+ LP G+++
Sbjct: 239 IAFPPLIIGSI-LLEAERLLGLPFFDHTLGGDPLLWQHLFWLFGHPEVYIIFLPAAGMVA 297
Query: 422 HIISQERGK 448
++ GK
Sbjct: 298 TMLPTFVGK 306
Score = 34.3 bits (75), Expect = 2.9
Identities = 13/29 (44%), Positives = 22/29 (75%)
Frame = +1
Query: 520 AHHIFTVGIDIDTRAYFTSATIIIAVPTG 606
AHH+F G+ I + + F++A+ ++AVPTG
Sbjct: 330 AHHMFATGLPILSLSLFSAASTMVAVPTG 358
>UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit I;
n=1; Candidatus Carsonella ruddii PV|Rep: Cytochrome O
ubiquinol oxidase subunit I - Carsonella ruddii (strain
PV)
Length = 606
Score = 63.7 bits (148), Expect = 4e-09
Identities = 33/73 (45%), Positives = 44/73 (60%)
Frame = +2
Query: 215 SCRDYSIFIIIITTVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 394
+C +I I+I +L + + DR L+T F+ GG +LY +L +GHPEVYIL
Sbjct: 226 TCLCSNILILISFPILTILLFQIFLDRTLSTHFYSSFYGGQQMLYINLIWAWGHPEVYIL 285
Query: 395 ILPGFGIISHIIS 433
ILP FGI S IIS
Sbjct: 286 ILPSFGIFSEIIS 298
Score = 36.3 bits (80), Expect = 0.71
Identities = 15/36 (41%), Positives = 24/36 (66%)
Frame = +1
Query: 499 VIRIIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTG 606
V+ +V HH FT+G + +F+ +T+IIA+PTG
Sbjct: 320 VLSFLVWLHHFFTMGSGYLSNIFFSISTMIIAIPTG 355
>UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase
polypeptide I (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=20; cellular organisms|Rep: Alternative
Cytochrome c oxidase polypeptide I (Cytochrome BB3
subunit 1) (Oxidase BB(3) subunit 1) - Microscilla
marina ATCC 23134
Length = 635
Score = 63.3 bits (147), Expect = 5e-09
Identities = 35/74 (47%), Positives = 45/74 (60%), Gaps = 10/74 (13%)
Frame = +2
Query: 257 VLAGAITILLTDRNLNTSFFDP----AG------GGDPILYQHLF*FFGHPEVYILILPG 406
VL A +L+ DR+L TSFF AG GG P+L+QHLF F GHPEVYI+++P
Sbjct: 253 VLFSAALLLIFDRSLGTSFFLSEIYIAGEALHHQGGSPVLFQHLFWFLGHPEVYIVLIPA 312
Query: 407 FGIISHIISQERGK 448
GI S +I+ K
Sbjct: 313 LGITSEVIATNARK 326
>UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1;
Periclimenes thermohydrophilus|Rep: Cytochrome oxidase
subunit I - Periclimenes thermohydrophilus
Length = 217
Score = 63.3 bits (147), Expect = 5e-09
Identities = 38/77 (49%), Positives = 41/77 (53%)
Frame = -3
Query: 238 KNAVIPTAHTNKGN*SNDILFNRXXXXXXXXXXXXXIDEIPAKCSEKIARSTDLPLCAIL 59
K AV T TN G S I +R I+E PAKC+EKI STD P CAI
Sbjct: 41 KMAVSNTDQTNSGMRSMVIPADRMLITVVMKFTAPKIEETPAKCNEKIPMSTDAPACAIP 100
Query: 58 DESGG*TVHPVPAPFST 8
SGG TVHPVP P ST
Sbjct: 101 LASGGYTVHPVPTPLST 117
Score = 58.0 bits (134), Expect = 2e-07
Identities = 27/35 (77%), Positives = 30/35 (85%)
Frame = -1
Query: 360 NKC*YKIGSPPPAGSKNDVFKFRSVNNIVIAPAKT 256
NKC + IGSPPPAGSK +VFKFRSV +IVIAPA T
Sbjct: 1 NKC-WSIGSPPPAGSKKEVFKFRSVKSIVIAPAST 34
>UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|Rep:
Cox-i2 protein - Candida stellata (Yeast)
Length = 586
Score = 62.5 bits (145), Expect = 9e-09
Identities = 31/75 (41%), Positives = 45/75 (60%)
Frame = +3
Query: 9 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 188
++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G+SS
Sbjct: 136 IDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAINLMVTIINMRANGMD 195
Query: 189 FDQLPLFV*AVGITA 233
+ +LPLFV +V ITA
Sbjct: 196 YSKLPLFVWSVLITA 210
Score = 60.9 bits (141), Expect = 3e-08
Identities = 32/62 (51%), Positives = 43/62 (69%)
Frame = +2
Query: 230 SIFIIIITTVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGF 409
++ II+ VLA +T+LL DRN NTSFF +GGGDP+LY+H+ F+ +P V ILI
Sbjct: 210 AVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHI--FYKNP-VLILIWLTS 266
Query: 410 GI 415
GI
Sbjct: 267 GI 268
>UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium
cryptum JF-5|Rep: Cytochrome-c oxidase - Acidiphilium
cryptum (strain JF-5)
Length = 689
Score = 62.1 bits (144), Expect = 1e-08
Identities = 32/66 (48%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Frame = +2
Query: 239 IIIITT--VLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFG 412
II +T +L A+ +L DR L T FF GG+ +LY +LF +GHPEVY ++LP FG
Sbjct: 256 IIALTAFPILGVALAMLGADRYLGTHFFTAGLGGNLMLYTNLFWIWGHPEVYFVVLPAFG 315
Query: 413 IISHII 430
IS II
Sbjct: 316 FISEII 321
Score = 33.5 bits (73), Expect = 5.0
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +1
Query: 523 HHIFTVGIDIDTRAYFTSATIIIAVPTG 606
HH FT+G +F++AT+++ +PTG
Sbjct: 352 HHFFTMGAGPGINIFFSTATMLVGIPTG 379
>UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1;
Blastopirellula marina DSM 3645|Rep: Cytochrome c
oxidase subunit I - Blastopirellula marina DSM 3645
Length = 595
Score = 61.7 bits (143), Expect = 2e-08
Identities = 32/70 (45%), Positives = 43/70 (61%), Gaps = 11/70 (15%)
Frame = +2
Query: 257 VLAGAITILLTDRNLNTSFFDP-----------AGGGDPILYQHLF*FFGHPEVYILILP 403
VL A ++L DR + T FF P AGGG P+L+QHLF F+ HP VYI+ILP
Sbjct: 239 VLTAAGFMMLADRLIGTGFFLPEGLVVNNSPMAAGGGQPLLWQHLFWFYSHPAVYIMILP 298
Query: 404 GFGIISHIIS 433
G++S I++
Sbjct: 299 AMGMVSDILA 308
>UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3;
Rhodobacteraceae|Rep: Cytochrome c, monohaem -
Rhodobacter sphaeroides ATCC 17025
Length = 878
Score = 61.3 bits (142), Expect = 2e-08
Identities = 25/47 (53%), Positives = 33/47 (70%)
Frame = +2
Query: 290 DRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 430
+R + FFDP GGDP+L+QHLF FGHPEVYI+ LP + + I+
Sbjct: 254 ERGFDWPFFDPERGGDPLLWQHLFWIFGHPEVYIIFLPLIALAAMIV 300
>UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2;
Rhodobacteraceae|Rep: QoxA, Quinol oxidase subunit I -
Roseovarius nubinhibens ISM
Length = 818
Score = 61.3 bits (142), Expect = 2e-08
Identities = 29/58 (50%), Positives = 39/58 (67%)
Frame = +2
Query: 257 VLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 430
++ G+I + L +R + FF A GGD +L+QHLF FGHPEVYI+ LP G IS I+
Sbjct: 218 LILGSILLEL-ERAFDMPFFQAAAGGDALLWQHLFWLFGHPEVYIIFLPAAGAISTIL 274
>UniRef50_Q6TP93 Cluster: Cytochrome c oxidase subunit I; n=2;
Bruchidius|Rep: Cytochrome c oxidase subunit I -
Bruchidius aff. varius GLK-2003
Length = 339
Score = 61.3 bits (142), Expect = 2e-08
Identities = 26/36 (72%), Positives = 33/36 (91%)
Frame = +1
Query: 499 VIRIIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTG 606
++ +V AHH+FTVG+D+DTRAYFTSAT+IIAVPTG
Sbjct: 195 LLGFVVWAHHMFTVGMDVDTRAYFTSATMIIAVPTG 230
Score = 55.6 bits (128), Expect = 1e-06
Identities = 36/95 (37%), Positives = 40/95 (42%)
Frame = +2
Query: 380 EVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXSLFEXXXXXXXXXXXXX 559
EVYILILPGFG+ISHIISQE GKKE F +
Sbjct: 155 EVYILILPGFGMISHIISQESGKKEAFGTLGMIYAMMAIGLLGFVVWAHHMFTVGMDVDT 214
Query: 560 XXXXXXXXXXXXYQQGIKIFR*LATILGTPINYNP 664
GIK+F LAT GT I Y+P
Sbjct: 215 RAYFTSATMIIAVPTGIKVFSWLATFHGTQILYSP 249
>UniRef50_P29649 Cluster: Cytochrome c oxidase subunit 1; n=441;
Bilateria|Rep: Cytochrome c oxidase subunit 1 - Pantodon
buchholtzi (Butterflyfish)
Length = 184
Score = 61.3 bits (142), Expect = 2e-08
Identities = 26/36 (72%), Positives = 33/36 (91%)
Frame = +1
Query: 499 VIRIIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTG 606
++ IV AHH+FTVG+D+DTRAYFTSAT+IIA+PTG
Sbjct: 47 LLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTG 82
Score = 59.3 bits (137), Expect = 9e-08
Identities = 25/32 (78%), Positives = 28/32 (87%)
Frame = +2
Query: 365 FFGHPEVYILILPGFGIISHIISQERGKKETF 460
FFGHPEVYILILPGFG+ISHI++ GKKE F
Sbjct: 2 FFGHPEVYILILPGFGMISHIVAYYSGKKEPF 33
>UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15;
Proteobacteria|Rep: Quinol oxidase subunit I -
Rhodobacter sphaeroides (Rhodopseudomonas sphaeroides)
Length = 825
Score = 59.7 bits (138), Expect = 7e-08
Identities = 29/58 (50%), Positives = 38/58 (65%)
Frame = +2
Query: 257 VLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 430
++ G+I + L +R FF A GGD +L+QHLF FGHPEVYI+ LP G IS I+
Sbjct: 218 LILGSILLEL-ERAFGLPFFQVAEGGDSLLWQHLFWLFGHPEVYIIFLPAAGAISTIL 274
>UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1;
Myrmarachne sp. G FSC-2006|Rep: Cytochrome c oxidase
subunit I - Myrmarachne sp. G FSC-2006
Length = 129
Score = 58.8 bits (136), Expect = 1e-07
Identities = 28/40 (70%), Positives = 30/40 (75%)
Frame = +3
Query: 9 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 128
VE G G G TVYPPL+S + H G SVD AIFSLHLAG SS
Sbjct: 13 VEMGVGAGWTVYPPLASVVGHGGSSVDFAIFSLHLAGASS 52
>UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3;
Proteobacteria|Rep: Cytochrome-c oxidase - Nitrosomonas
eutropha (strain C71)
Length = 703
Score = 57.6 bits (133), Expect = 3e-07
Identities = 31/73 (42%), Positives = 40/73 (54%)
Frame = +2
Query: 230 SIFIIIITTVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGF 409
+I +I L L DR L+ FF GG+ + + ++F FGHPEVYILILP F
Sbjct: 256 AIMMIFAMPPLTVVTLQLALDRYLDFHFFTNGLGGNQMNFLNMFWLFGHPEVYILILPAF 315
Query: 410 GIISHIISQERGK 448
G+ S I S GK
Sbjct: 316 GVYSEIFSTFSGK 328
>UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Aedes
cretinus|Rep: Cytochrome c oxidase subunit I - Aedes
cretinus
Length = 153
Score = 55.6 bits (128), Expect = 1e-06
Identities = 26/32 (81%), Positives = 27/32 (84%)
Frame = +3
Query: 9 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFS 104
VENGAGTG TVYPPLSS AH G SVDLAI+S
Sbjct: 34 VENGAGTGWTVYPPLSSGTAHAGASVDLAIYS 65
Score = 39.9 bits (89), Expect = 0.058
Identities = 19/32 (59%), Positives = 20/32 (62%)
Frame = +1
Query: 280 IINRSKLKYIIF*SCWRRRPNFISTFILIFWT 375
IIN K KY IF W P +STFILIFWT
Sbjct: 121 IINWPKSKYFIFWPNWSSSPYSLSTFILIFWT 152
>UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1;
Munidopsis verrucosus|Rep: Cytochrome c oxidase subunit
1 - Munidopsis verrucosus
Length = 154
Score = 55.6 bits (128), Expect = 1e-06
Identities = 29/61 (47%), Positives = 37/61 (60%)
Frame = +3
Query: 48 PLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGI 227
PL+S+IAH G SVD+AIFSLHLAG+SS + D++PLF+ AV I
Sbjct: 72 PLASSIAHAGASVDMAIFSLHLAGVSSILGSVNFMTTVINMRAKGMTLDRVPLFIWAVFI 131
Query: 228 T 230
T
Sbjct: 132 T 132
>UniRef50_Q9TCU2 Cluster: Cytochrome c oxidase subunit I; n=1;
Taenia saginata|Rep: Cytochrome c oxidase subunit I -
Taenia saginata (Beef tapeworm)
Length = 147
Score = 55.2 bits (127), Expect = 1e-06
Identities = 25/60 (41%), Positives = 34/60 (56%)
Frame = +1
Query: 427 YFTRKRKKRNFWLFRNNLCYTSNWVIRIIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTG 606
Y K FW +CY N + V HH+FTVG+D++T +F+S T+II VPTG
Sbjct: 21 YVKNKYVSSCFWFLWFVVCYVFNMCMGSSVWGHHMFTVGLDVNTAVFFSSVTMIIRVPTG 80
>UniRef50_O99652 Cluster: Cytochrome c oxidase subunit I; n=1;
Tetragona dorsalis ziegleri|Rep: Cytochrome c oxidase
subunit I - Tetragona dorsalis ziegleri
Length = 111
Score = 54.8 bits (126), Expect = 2e-06
Identities = 27/53 (50%), Positives = 35/53 (66%)
Frame = +2
Query: 242 IIITTVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIL 400
I+ +LAG IT+LL+DRN N FF GG PIL+Q++ FGH +V LIL
Sbjct: 29 ILSLPMLAGTITMLLSDRNFNKFFFILIGGEYPILHQYMLWLFGHTDVLFLIL 81
>UniRef50_Q9XLV8 Cluster: Cytochrome c oxidase subunit I; n=1;
Diplonema papillatum|Rep: Cytochrome c oxidase subunit I
- Diplonema papillatum
Length = 287
Score = 54.4 bits (125), Expect = 3e-06
Identities = 22/35 (62%), Positives = 30/35 (85%)
Frame = +1
Query: 499 VIRIIV*AHHIFTVGIDIDTRAYFTSATIIIAVPT 603
V+ V AHH+FTVG+D+DTR YF+SAT++IA+PT
Sbjct: 39 VVGYFVWAHHMFTVGLDVDTRVYFSSATLLIALPT 73
>UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2;
Deinococcus|Rep: Cytochrome c oxidase, subunit I -
Deinococcus radiodurans
Length = 820
Score = 53.2 bits (122), Expect = 6e-06
Identities = 25/68 (36%), Positives = 37/68 (54%)
Frame = +2
Query: 230 SIFIIIITTVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGF 409
SI ++ L A + + L S F+P GG P+LYQ F F+ HP VY+++LP
Sbjct: 210 SILQLLTLGGLTAAALLTYLEIKLGLSMFNPGIGGVPVLYQQFFWFYSHPAVYVMLLPYL 269
Query: 410 GIISHIIS 433
GI + + S
Sbjct: 270 GIGAEVAS 277
Score = 34.7 bits (76), Expect = 2.2
Identities = 16/36 (44%), Positives = 23/36 (63%)
Frame = +1
Query: 499 VIRIIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTG 606
++ IV HH+F VGI + F +T+I+AVPTG
Sbjct: 299 LVSCIVWLHHMFAVGIPEAWQIAFMISTLIVAVPTG 334
>UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1;
Planctomyces maris DSM 8797|Rep: Cytochrome c oxidase
subunit I - Planctomyces maris DSM 8797
Length = 606
Score = 52.8 bits (121), Expect = 8e-06
Identities = 20/36 (55%), Positives = 29/36 (80%)
Frame = +2
Query: 326 GGGDPILYQHLF*FFGHPEVYILILPGFGIISHIIS 433
GGG P+L+QHLF F+ HP VYI++LP G++S ++S
Sbjct: 276 GGGQPLLWQHLFWFYSHPAVYIMLLPIMGMVSDMLS 311
>UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1;
Aplidium nordmanni|Rep: Cytochrome c oxidase subunit I -
Aplidium nordmanni
Length = 227
Score = 48.4 bits (110), Expect = 2e-04
Identities = 23/37 (62%), Positives = 25/37 (67%)
Frame = +3
Query: 18 GAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 128
G G VYPP SS +AH +VDL IF LHLAGISS
Sbjct: 111 GVGXXWXVYPPXSSGLAHSSGAVDLGIFXLHLAGISS 147
Score = 34.7 bits (76), Expect = 2.2
Identities = 18/43 (41%), Positives = 22/43 (51%)
Frame = +2
Query: 239 IIIITTVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*F 367
+I+ VLA AIT+L R N SFF P G P + F F
Sbjct: 185 LILSXPVLAAAITMLXXXRXXNXSFFXPXXXGXPXXFPTFFXF 227
>UniRef50_Q9TAP9 Cluster: Cytochrome c oxidase subunit I; n=2;
Toxoplasma gondii|Rep: Cytochrome c oxidase subunit I -
Toxoplasma gondii
Length = 192
Score = 48.0 bits (109), Expect = 2e-04
Identities = 19/29 (65%), Positives = 26/29 (89%)
Frame = +1
Query: 520 AHHIFTVGIDIDTRAYFTSATIIIAVPTG 606
AHH+ TVG++ DTRAYF++ TI+IA+PTG
Sbjct: 2 AHHMMTVGLEGDTRAYFSAMTIMIAIPTG 30
>UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3;
Halobacteriaceae|Rep: Cytochrome c oxidase subunit I -
Haloarcula marismortui (Halobacterium marismortui)
Length = 854
Score = 47.6 bits (108), Expect = 3e-04
Identities = 26/75 (34%), Positives = 38/75 (50%), Gaps = 11/75 (14%)
Frame = +2
Query: 260 LAGAITILLTDRNLNTSFF-----------DPAGGGDPILYQHLF*FFGHPEVYILILPG 406
L A+ IL +D L T++F D G +L+ HLF FFGHPEVYI+ P
Sbjct: 213 LLAALMILASDHILGTTYFQYSIDGTTMATDADNPGASLLWAHLFWFFGHPEVYIVFFPA 272
Query: 407 FGIISHIISQERGKK 451
G+++ G++
Sbjct: 273 LGVMAECFQTFTGRR 287
>UniRef50_A2T428 Cluster: Putative uncharacterized protein ORF820;
n=1; Placozoan sp. BZ49|Rep: Putative uncharacterized
protein ORF820 - Placozoan sp. BZ49
Length = 820
Score = 47.2 bits (107), Expect = 4e-04
Identities = 19/26 (73%), Positives = 25/26 (96%)
Frame = +1
Query: 529 IFTVGIDIDTRAYFTSATIIIAVPTG 606
++ VG+D+DTRAYFT+AT+IIAVPTG
Sbjct: 1 MYVVGMDVDTRAYFTAATMIIAVPTG 26
>UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;
n=2; Thermoplasmatales|Rep: Cytochrome c oxidase
polypeptide I/III - Picrophilus torridus
Length = 841
Score = 47.2 bits (107), Expect = 4e-04
Identities = 21/58 (36%), Positives = 37/58 (63%)
Frame = +2
Query: 260 LAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIIS 433
+ G +LL ++ S++ GG +++++LF +FGHPEVY+L+LPG G + +S
Sbjct: 232 ITGLFFLLLVGNLMHASYYISNYGG-ALMWENLFWYFGHPEVYLLLLPGTGAMFDYLS 288
>UniRef50_Q9TCV5 Cluster: Cytochrome c oxidase subunit I; n=6;
Digenea|Rep: Cytochrome c oxidase subunit I -
Echinostoma hortense
Length = 154
Score = 45.6 bits (103), Expect = 0.001
Identities = 18/21 (85%), Positives = 20/21 (95%)
Frame = +2
Query: 365 FFGHPEVYILILPGFGIISHI 427
FFGHPEVY+LILP FGI+SHI
Sbjct: 1 FFGHPEVYVLILPVFGIVSHI 21
Score = 43.6 bits (98), Expect = 0.005
Identities = 16/32 (50%), Positives = 24/32 (75%)
Frame = +1
Query: 511 IV*AHHIFTVGIDIDTRAYFTSATIIIAVPTG 606
+V AHH+F VG D+ T +F+S T++I +PTG
Sbjct: 50 VVWAHHMFMVGYDVHTAVFFSSVTMVIGIPTG 81
>UniRef50_Q4XXN6 Cluster: Putative uncharacterized protein; n=1;
Plasmodium chabaudi|Rep: Putative uncharacterized
protein - Plasmodium chabaudi
Length = 329
Score = 43.2 bits (97), Expect = 0.006
Identities = 15/26 (57%), Positives = 24/26 (92%)
Frame = +1
Query: 529 IFTVGIDIDTRAYFTSATIIIAVPTG 606
++T G+++DTRA+FTS TI+I++PTG
Sbjct: 1 MYTTGLEVDTRAFFTSTTILISIPTG 26
>UniRef50_Q6RCN4 Cluster: Cytochrome c oxidase subunit I; n=1;
Bucephalid sp. KH-2004|Rep: Cytochrome c oxidase subunit
I - Bucephalid sp. KH-2004
Length = 121
Score = 42.7 bits (96), Expect = 0.008
Identities = 17/32 (53%), Positives = 23/32 (71%)
Frame = +1
Query: 511 IV*AHHIFTVGIDIDTRAYFTSATIIIAVPTG 606
+V HH+F VG D+ T +F+S T+II VPTG
Sbjct: 26 VVWLHHMFMVGFDVKTAVFFSSVTMIIGVPTG 57
>UniRef50_Q8LX74 Cluster: Cytochrome c oxidase subunit I; n=1;
Chaoborus punctipennis|Rep: Cytochrome c oxidase subunit
I - Chaoborus punctipennis
Length = 205
Score = 42.3 bits (95), Expect = 0.011
Identities = 18/20 (90%), Positives = 20/20 (100%)
Frame = +1
Query: 547 DIDTRAYFTSATIIIAVPTG 606
D+DTRAYFTSAT+IIAVPTG
Sbjct: 1 DVDTRAYFTSATMIIAVPTG 20
>UniRef50_Q8LX82 Cluster: Cytochrome c oxidase subunit I; n=3;
Chaoborus|Rep: Cytochrome c oxidase subunit I -
Chaoborus obscuripes
Length = 206
Score = 41.9 bits (94), Expect = 0.014
Identities = 22/34 (64%), Positives = 25/34 (73%)
Frame = +1
Query: 550 IDTRAYFTSATIIIAVPTGN*NF*MTSYNTGNSN 651
+DTRAYFTSAT+IIAVPTG F + T NSN
Sbjct: 2 VDTRAYFTSATMIIAVPTGIKIFSWLATFTWNSN 35
>UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388;
Coelomata|Rep: Cytochrome c oxidase subunit I - Picoides
borealis
Length = 513
Score = 38.3 bits (85), Expect = 0.18
Identities = 16/23 (69%), Positives = 20/23 (86%)
Frame = +1
Query: 538 VGIDIDTRAYFTSATIIIAVPTG 606
VG+ + RAYFTSAT+IIA+PTG
Sbjct: 296 VGMXVXPRAYFTSATMIIAIPTG 318
>UniRef50_Q9MFX8 Cluster: Cytochrome oxidase I; n=5; Echinometra
lucunter|Rep: Cytochrome oxidase I - Echinometra
lucunter
Length = 199
Score = 37.5 bits (83), Expect = 0.31
Identities = 19/49 (38%), Positives = 24/49 (48%)
Frame = +1
Query: 352 TFILIFWTS*SLYFNFTRIWYNFSYYFTRKRKKRNFWLFRNNLCYTSNW 498
T ILI W S+Y F IW +F+ T FW+ N L + SNW
Sbjct: 1 TPILILWPPSSIYSYFAGIWNDFARNRTLFSNASTFWVPGNGLRHDSNW 49
>UniRef50_Q9B9T9 Cluster: Cytochrome oxidase subunit 1; n=7;
Locustacarus buchneri|Rep: Cytochrome oxidase subunit 1
- Locustacarus buchneri
Length = 185
Score = 37.1 bits (82), Expect = 0.41
Identities = 24/74 (32%), Positives = 35/74 (47%)
Frame = +1
Query: 277 NIINRSKLKYIIF*SCWRRRPNFISTFILIFWTS*SLYFNFTRIWYNFSYYFTRKRKKRN 456
N N SKL++I+ S PN I ILI T L+ N T I ++ +K N
Sbjct: 112 NTTNSSKLQHILLRSFGGSGPNPIPASILILRTPSGLHSNSTSIRNRITHLHNIFSQKSN 171
Query: 457 FWLFRNNLCYTSNW 498
++NNL ++ W
Sbjct: 172 ILYYKNNLRHSIYW 185
>UniRef50_Q8LX70 Cluster: Cytochrome c oxidase subunit I; n=4;
Chaoborus|Rep: Cytochrome c oxidase subunit I -
Chaoborus crystallinus (Phantom midge) (Tipula
crystallina)
Length = 207
Score = 37.1 bits (82), Expect = 0.41
Identities = 16/21 (76%), Positives = 19/21 (90%)
Frame = +1
Query: 544 IDIDTRAYFTSATIIIAVPTG 606
+ + TRAYFTSAT+IIAVPTG
Sbjct: 1 LTLHTRAYFTSATMIIAVPTG 21
>UniRef50_Q60AP6 Cluster: Putative membrane protein; n=1;
Methylococcus capsulatus|Rep: Putative membrane protein
- Methylococcus capsulatus
Length = 263
Score = 36.7 bits (81), Expect = 0.54
Identities = 22/71 (30%), Positives = 33/71 (46%)
Frame = +2
Query: 221 RDYSIFIIIITTVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIL 400
RD + +++ +T +L G + + + PA GG P + HL G Y LI
Sbjct: 6 RDMNYWLLFVTGLLTGFHCVGMCGALVLAYAAKPASGGRPTPFSHLLYGTGKTLSYTLIG 65
Query: 401 PGFGIISHIIS 433
GFG+I I S
Sbjct: 66 AGFGLIGSIFS 76
>UniRef50_O86945 Cluster: Sub-unit I of an aa3-type cytochrome
oxidase; n=1; Acidithiobacillus ferrooxidans|Rep:
Sub-unit I of an aa3-type cytochrome oxidase -
Thiobacillus ferrooxidans (Acidithiobacillus
ferrooxidans)
Length = 627
Score = 36.7 bits (81), Expect = 0.54
Identities = 18/41 (43%), Positives = 21/41 (51%)
Frame = +2
Query: 308 SFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 430
S F G P+ Y F F HPEVY+ ILP F I I+
Sbjct: 311 SHFYTGPTGHPLAYLDQFWFLFHPEVYVFILPAFAIWLEIL 351
>UniRef50_Q2N1P8 Cluster: Cytochrome c oxidase subunit I; n=2;
Eutetramorium sp. BLF m1|Rep: Cytochrome c oxidase
subunit I - Eutetramorium sp. BLF m1
Length = 201
Score = 36.7 bits (81), Expect = 0.54
Identities = 15/26 (57%), Positives = 22/26 (84%)
Frame = +2
Query: 230 SIFIIIITTVLAGAITILLTDRNLNT 307
++ +++ VLAGAIT+LLTDRN+NT
Sbjct: 176 AVLLLLSLPVLAGAITMLLTDRNMNT 201
>UniRef50_O67937 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 592
Score = 36.3 bits (80), Expect = 0.71
Identities = 26/74 (35%), Positives = 37/74 (50%), Gaps = 3/74 (4%)
Frame = +2
Query: 236 FIIIITTVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGI 415
FI+ ++ AI IL L+ D +P+L + LF FFGHP VY +LP +
Sbjct: 179 FILWTIMIVPVAIEILFQLLPLSLGLVDEI---NPLLARTLFWFFGHPVVYFWLLPAYVA 235
Query: 416 ISHI---ISQERGK 448
+ I I E+GK
Sbjct: 236 LYTILPKIVSEKGK 249
>UniRef50_A5URU0 Cluster: Cytochrome c oxidase, subunit I; n=4;
Chloroflexaceae|Rep: Cytochrome c oxidase, subunit I -
Roseiflexus sp. RS-1
Length = 561
Score = 35.5 bits (78), Expect = 1.2
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = +2
Query: 329 GGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERG 445
G DP+L + LF F GHP VY +LP + + + Q+ G
Sbjct: 224 GTDPVLARTLFWFTGHPIVYFWLLPAYISWYNFVPQQAG 262
>UniRef50_Q2Y5N3 Cluster: Integral membrane proteins containing
uncharacterized repeats-like precursor; n=3;
Nitrosospira multiformis ATCC 25196|Rep: Integral
membrane proteins containing uncharacterized
repeats-like precursor - Nitrosospira multiformis
(strain ATCC 25196 / NCIMB 11849)
Length = 433
Score = 34.7 bits (76), Expect = 2.2
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +2
Query: 377 PEVYILILPGFGIISHIISQERGKK 451
PE+Y LILPG G++ I Q++ KK
Sbjct: 407 PEIYALILPGLGLVGFIARQKKAKK 431
>UniRef50_P98004 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Cytochrome aa3 subunit
1) (Oxidase aa(3) subunit 1); n=5; Sulfolobaceae|Rep:
Quinol oxidase subunit 1 (EC 1.10.3.-) (Quinol oxidase
polypeptide I) (Cytochrome aa3 subunit 1) (Oxidase aa(3)
subunit 1) - Sulfolobus acidocaldarius
Length = 517
Score = 34.3 bits (75), Expect = 2.9
Identities = 20/74 (27%), Positives = 36/74 (48%)
Frame = +2
Query: 227 YSIFIIIITTVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPG 406
++ + + + V+A + L T +F + +L+ LF F+GHP VY + P
Sbjct: 186 FAAYGVAFSIVIAVTLPALAAATLWYTLYFFANVPVNNLLWAILFWFYGHPVVYYVPFPL 245
Query: 407 FGIISHIISQERGK 448
FG + + I Q G+
Sbjct: 246 FGALYYYIPQYAGR 259
>UniRef50_Q8LX68 Cluster: Cytochrome oxidase I; n=2; Chaoborus|Rep:
Cytochrome oxidase I - Chaoborus pallidus
Length = 206
Score = 33.9 bits (74), Expect = 3.8
Identities = 18/39 (46%), Positives = 22/39 (56%)
Frame = +1
Query: 547 DIDTRAYFTSATIIIAVPTGN*NF*MTSYNTGNSN*L*P 663
D+DTRAYFT P N NF MT Y + ++N L P
Sbjct: 1 DVDTRAYFTFNNYNYCHPYSNLNFLMTCYPSWDTNLLHP 39
>UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1;
Watasenia scintillans|Rep: Cytochrome c oxidase subunit
I - Watasenia scintillans (Sparkling enope)
Length = 217
Score = 33.1 bits (72), Expect = 6.6
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +3
Query: 75 GRSVDLAIFSLHLAGISS 128
G SVDLAIF LHLAG+SS
Sbjct: 122 GPSVDLAIFPLHLAGVSS 139
>UniRef50_Q9TAP7 Cluster: Cytochrome oxidase subunit 1; n=1;
Clonorchis sinensis|Rep: Cytochrome oxidase subunit 1 -
Clonorchis sinensis
Length = 120
Score = 32.7 bits (71), Expect = 8.8
Identities = 17/33 (51%), Positives = 22/33 (66%)
Frame = -2
Query: 605 PVGTAIIIVAEVKYARVSISIPTVNI**AQTMI 507
PVGT +I+V E+K V S PTVN+ AQT +
Sbjct: 64 PVGTPMIMVTELKKTAVPKSSPTVNMWWAQTTL 96
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 494,123,340
Number of Sequences: 1657284
Number of extensions: 7905720
Number of successful extensions: 16018
Number of sequences better than 10.0: 116
Number of HSP's better than 10.0 without gapping: 15519
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15983
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 54545459628
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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