Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120822.seq
         (685 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    27   0.19 
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    25   0.58 
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    24   1.0  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    24   1.3  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   9.4  

>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 26.6 bits (56), Expect = 0.19
 Identities = 22/77 (28%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
 Frame = -1

Query: 229 QVYQISSKSGTLKKSLI*-TDNYNLTAYSLYSLDLFLYIKAFTSIVHGSV*IIFLLMLAF 53
           ++  ++S+  T +KS I   D+YN   +  + LD  L     TS ++    IIF +  +F
Sbjct: 249 RIAAVASEKVTSEKSWIALNDDYNRLCHLCFLLDEKLSYIILTSFLNNFYFIIFQVFESF 308

Query: 52  NL-KGSPLTMIFFKIIL 5
            L K + L  +++ I L
Sbjct: 309 YLHKATTLETVYYFISL 325


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 25.0 bits (52), Expect = 0.58
 Identities = 11/32 (34%), Positives = 20/32 (62%)
 Frame = +2

Query: 284 LNTSTSNDGTKSVPVDVYKRVVEFEEAEAHLR 379
           L++  SND TK   V +Y+R+ + ++A   L+
Sbjct: 131 LSSFESNDETKDGKVGLYERIQKLKKANPSLK 162


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 19/70 (27%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
 Frame = -2

Query: 276 RFLTAVTFLFPCLVLFKFIRFHPSL-EL*KNH*FKQTITTLLPIHSIHWICFYILKLLLA 100
           RF T +TF   C  +   +  H +L ++ K+H       +L  +H + WI    + L+  
Sbjct: 219 RFPTELTF---CNKIKHLVNLHKNLVKVAKDH------NSLYSLHLLLWITVTFILLVGD 269

Query: 99  SFTVVFELFF 70
           S+ V++  FF
Sbjct: 270 SYIVMYVFFF 279


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 6/18 (33%), Positives = 13/18 (72%)
 Frame = -1

Query: 427 YVLACFIEKGSILISWTQ 374
           + +ACF+ +G + +SW +
Sbjct: 372 HAVACFLTRGDLWLSWEE 389


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 9/32 (28%), Positives = 17/32 (53%)
 Frame = -3

Query: 335 IHQRELTLFRHLMYLYLICAVS*QPLLFFSHV 240
           I Q E   + HL+Y++L+  +    + +  HV
Sbjct: 621 IVQSEQIAWLHLLYIFLVGIMYAADVFYICHV 652


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 132,873
Number of Sequences: 336
Number of extensions: 2584
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17906060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)