Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120822.seq
         (685 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2 pro...    25   2.9  
CR954256-10|CAJ14151.1|  548|Anopheles gambiae putative alkaline...    23   6.8  
AY391746-1|AAR28996.1|  502|Anopheles gambiae putative GPCR prot...    23   6.8  

>DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2
           protein.
          Length = 961

 Score = 24.6 bits (51), Expect = 2.9
 Identities = 7/18 (38%), Positives = 13/18 (72%)
 Frame = -1

Query: 427 YVLACFIEKGSILISWTQ 374
           + +ACF+ +G + ISW +
Sbjct: 359 HAVACFLTRGDLWISWEE 376


>CR954256-10|CAJ14151.1|  548|Anopheles gambiae putative alkaline
           phosphatase protein.
          Length = 548

 Score = 23.4 bits (48), Expect = 6.8
 Identities = 12/21 (57%), Positives = 14/21 (66%)
 Frame = -3

Query: 422 LGMFY*KRQHPYQLDADELQL 360
           LG+F  K   PY LDADE Q+
Sbjct: 331 LGLFSSKHL-PYHLDADEQQI 350


>AY391746-1|AAR28996.1|  502|Anopheles gambiae putative GPCR
           protein.
          Length = 502

 Score = 23.4 bits (48), Expect = 6.8
 Identities = 23/97 (23%), Positives = 40/97 (41%), Gaps = 1/97 (1%)
 Frame = -1

Query: 382 WTQMSFSFFKFNNTLVYINGN*LCSVI*CTCI*FAPFLNSRYFSFPMFSFIQVYQISSKS 203
           W  ++F+  +F   L  +    +C+V     + FA  +   + S P+F F      +S +
Sbjct: 208 WFVVAFTVERFIAVLYPLKRQTMCTVRRAKIVIFALTIAGIFISLPIFFFASPQFSASMN 267

Query: 202 GTLKKSLI*TDNYNLTAYSLYSLDLFL-YIKAFTSIV 95
            T+   +     Y   A     LD  L ++  FT IV
Sbjct: 268 DTICDIV---QEYKDQAAMFNFLDFILVFVVPFTIIV 301


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 577,789
Number of Sequences: 2352
Number of extensions: 10090
Number of successful extensions: 9
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68995575
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)