Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120822.seq
         (685 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L18972-1|AAC26837.1|  683|Homo sapiens anonymous protein.              31   3.8  
CR456542-1|CAG30428.1|  683|Homo sapiens PK1.3 protein.                31   3.8  
BC003615-1|AAH03615.1|  683|Homo sapiens THO complex 5 protein.        31   3.8  
AB023200-1|BAA76827.2|  687|Homo sapiens KIAA0983 protein protein.     31   3.8  

>L18972-1|AAC26837.1|  683|Homo sapiens anonymous protein.
          Length = 683

 Score = 31.1 bits (67), Expect = 3.8
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = +2

Query: 356 EEAEAHLRPADKDAAFFNKTCQDIRQLFKEI 448
           EEAE  LR   +D   +  TCQ++++L  EI
Sbjct: 39  EEAEVDLRDPGRDYELYKYTCQELQRLMAEI 69


>CR456542-1|CAG30428.1|  683|Homo sapiens PK1.3 protein.
          Length = 683

 Score = 31.1 bits (67), Expect = 3.8
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = +2

Query: 356 EEAEAHLRPADKDAAFFNKTCQDIRQLFKEI 448
           EEAE  LR   +D   +  TCQ++++L  EI
Sbjct: 39  EEAEVDLRDPGRDYELYKYTCQELQRLMAEI 69


>BC003615-1|AAH03615.1|  683|Homo sapiens THO complex 5 protein.
          Length = 683

 Score = 31.1 bits (67), Expect = 3.8
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = +2

Query: 356 EEAEAHLRPADKDAAFFNKTCQDIRQLFKEI 448
           EEAE  LR   +D   +  TCQ++++L  EI
Sbjct: 39  EEAEVDLRDPGRDYELYKYTCQELQRLMAEI 69


>AB023200-1|BAA76827.2|  687|Homo sapiens KIAA0983 protein protein.
          Length = 687

 Score = 31.1 bits (67), Expect = 3.8
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = +2

Query: 356 EEAEAHLRPADKDAAFFNKTCQDIRQLFKEI 448
           EEAE  LR   +D   +  TCQ++++L  EI
Sbjct: 43  EEAEVDLRDPGRDYELYKYTCQELQRLMAEI 73


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,658,712
Number of Sequences: 237096
Number of extensions: 1304062
Number of successful extensions: 2156
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2074
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2152
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7783251346
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)