Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120822.seq
         (685 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-2740|AAF55726.2| 1491|Drosophila melanogaster CG31213-P...    33   0.48 

>AE014297-2740|AAF55726.2| 1491|Drosophila melanogaster CG31213-PA
           protein.
          Length = 1491

 Score = 32.7 bits (71), Expect = 0.48
 Identities = 18/83 (21%), Positives = 37/83 (44%)
 Frame = -2

Query: 315 FVPSFDVLVFNLRRFLTAVTFLFPCLVLFKFIRFHPSLEL*KNH*FKQTITTLLPIHSIH 136
           +VP+          ++T ++F  PC+ + K++         K    K  +T +   +SIH
Sbjct: 9   YVPNHYAESAKAMTYMTLISFFLPCITIAKYVVAE------KERHQKAVLTAMGFSNSIH 62

Query: 135 WICFYILKLLLASFTVVFELFFF 67
           W+ +Y   +LL    ++  +  F
Sbjct: 63  WLAWYTKSMLLLLLCLLIMISIF 85


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,197,768
Number of Sequences: 53049
Number of extensions: 394714
Number of successful extensions: 681
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 653
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 680
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2992560750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)