Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120820.seq
(686 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P24729 Cluster: GP16 protein; n=12; Nucleopolyhedroviru... 179 5e-44
UniRef50_P24728 Cluster: Polyhedral envelope protein; n=6; Nucle... 93 8e-18
UniRef50_P17498 Cluster: Polyhedral envelope protein; n=7; Nucle... 74 3e-12
UniRef50_Q461U1 Cluster: Orf125; n=2; Nucleopolyhedrovirus|Rep: ... 70 5e-11
UniRef50_A0EZ02 Cluster: Gp16; n=1; Ecotropis obliqua NPV|Rep: G... 67 3e-10
UniRef50_A1YJ03 Cluster: Gp16; n=5; Nucleopolyhedrovirus|Rep: Gp... 49 9e-05
UniRef50_Q8WQX0 Cluster: Serine proteinase inhibitor serpin-2; n... 37 0.40
UniRef50_A5UN47 Cluster: Helicase, UvrD/REP family; n=1; Methano... 36 0.93
UniRef50_UPI0000E47588 Cluster: PREDICTED: similar to centrosome... 34 2.8
UniRef50_Q75AA9 Cluster: ADR009Wp; n=1; Eremothecium gossypii|Re... 34 3.7
UniRef50_O80618 Cluster: Predicted by genefinder and genscan; n=... 33 6.5
UniRef50_A6NU23 Cluster: Putative uncharacterized protein; n=1; ... 33 8.6
UniRef50_Q7XPG9 Cluster: OSJNBb0003B01.14 protein; n=20; Oryza s... 33 8.6
UniRef50_A0DE75 Cluster: Chromosome undetermined scaffold_47, wh... 33 8.6
UniRef50_A7F1R9 Cluster: Putative uncharacterized protein; n=1; ... 33 8.6
>UniRef50_P24729 Cluster: GP16 protein; n=12;
Nucleopolyhedrovirus|Rep: GP16 protein - Autographa
californica nuclear polyhedrosis virus (AcMNPV)
Length = 106
Score = 179 bits (436), Expect = 5e-44
Identities = 86/97 (88%), Positives = 88/97 (90%)
Frame = +1
Query: 7 MNFWATFSICLVGYLVYAGHLNNELQEIKSILVVMYESMEKHFSNVVDEIDSLKTDTFMM 186
MNFWATFSICLVGYLVYAGHLNNELQEIKSILVVMYESMEKHFSNVVDEIDSLKTDTFMM
Sbjct: 1 MNFWATFSICLVGYLVYAGHLNNELQEIKSILVVMYESMEKHFSNVVDEIDSLKTDTFMM 60
Query: 187 LSNLQNNTIRTWDAVVKNGKKISISTKKLTCY*QKTG 297
LSNLQNNTIRTWDAVVKNGKKIS +K+ K G
Sbjct: 61 LSNLQNNTIRTWDAVVKNGKKISNLDEKINVLLTKNG 97
>UniRef50_P24728 Cluster: Polyhedral envelope protein; n=6;
Nucleopolyhedrovirus|Rep: Polyhedral envelope protein -
Autographa californica nuclear polyhedrosis virus
(AcMNPV)
Length = 252
Score = 92.7 bits (220), Expect = 8e-18
Identities = 50/78 (64%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Frame = +1
Query: 388 MKPTNNVMFDDASVLWIDTDYIYQNLKMPLQAFQQLLFTIHLNIEK*STMRADRVINTVQ 567
MKPTNNVMFDDASVLWIDTDYIYQNLKMPLQAFQQLLFTI K NTV+
Sbjct: 1 MKPTNNVMFDDASVLWIDTDYIYQNLKMPLQAFQQLLFTIPSKHRKMINDAGGSCHNTVK 60
Query: 568 YWW-TFTERPFDLRTXCS 618
Y + LRT CS
Sbjct: 61 YMVDIYGAAVLVLRTPCS 78
Score = 63.7 bits (148), Expect = 4e-09
Identities = 34/57 (59%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Frame = +3
Query: 507 PSKHRKMIXDAGGSCHKHGPILVDFYGASV*-FANXLLVADQLLSTFIAXNXLGLLY 674
PSKHRKMI DAGGSCH +VD YGA+V ADQLLSTFIA N L Y
Sbjct: 41 PSKHRKMINDAGGSCHNTVKYMVDIYGAAVLVLRTPCSFADQLLSTFIANNYLCYFY 97
>UniRef50_P17498 Cluster: Polyhedral envelope protein; n=7;
Nucleopolyhedrovirus|Rep: Polyhedral envelope protein -
Orgyia pseudotsugata multicapsid polyhedrosis virus
(OpMNPV)
Length = 297
Score = 74.1 bits (174), Expect = 3e-12
Identities = 32/40 (80%), Positives = 34/40 (85%)
Frame = +1
Query: 388 MKPTNNVMFDDASVLWIDTDYIYQNLKMPLQAFQQLLFTI 507
M P NNVMFDDASV+WID DYIYQN KMPL FQQLLF+I
Sbjct: 1 MTPNNNVMFDDASVMWIDADYIYQNSKMPLSTFQQLLFSI 40
Score = 35.9 bits (79), Expect = 0.93
Identities = 28/64 (43%), Positives = 33/64 (51%), Gaps = 12/64 (18%)
Frame = +3
Query: 507 PSKHRKMIXDAGG------SC-----HKHGPILVDFYGASV*FAN-XLLVADQLLSTFIA 650
PSKHRKMI D G SC + +VD YGA+V L +DQLL+TF A
Sbjct: 41 PSKHRKMINDIGNPACNPPSCSFPPSNSTVKYMVDIYGAAVLALRCPSLFSDQLLTTFTA 100
Query: 651 XNXL 662
N L
Sbjct: 101 NNYL 104
>UniRef50_Q461U1 Cluster: Orf125; n=2; Nucleopolyhedrovirus|Rep:
Orf125 - Trichoplusia ni SNPV
Length = 95
Score = 70.1 bits (164), Expect = 5e-11
Identities = 32/89 (35%), Positives = 53/89 (59%)
Frame = +1
Query: 7 MNFWATFSICLVGYLVYAGHLNNELQEIKSILVVMYESMEKHFSNVVDEIDSLKTDTFMM 186
MN+ A + LV YL + G +++EL IK +L +YE+++ F +V ++ + DT
Sbjct: 1 MNYSAVTLVLLVAYLWHTGSISHELAAIKKLLTFIYEAIQDRFDAIVYDMAKFRNDTMFY 60
Query: 187 LSNLQNNTIRTWDAVVKNGKKISISTKKL 273
L+ +QN T T+D VV NG KI + +K+
Sbjct: 61 LNRIQNTTKITYDLVVTNGNKIDVINQKI 89
>UniRef50_A0EZ02 Cluster: Gp16; n=1; Ecotropis obliqua NPV|Rep: Gp16
- Ecotropis obliqua NPV
Length = 98
Score = 67.3 bits (157), Expect = 3e-10
Identities = 31/89 (34%), Positives = 51/89 (57%)
Frame = +1
Query: 7 MNFWATFSICLVGYLVYAGHLNNELQEIKSILVVMYESMEKHFSNVVDEIDSLKTDTFMM 186
MN+ A + Y+ G L++E++ +K +LVVMY+ +E FSN+ +EI LK TF +
Sbjct: 1 MNYSAICLVIFAAYMWQTGSLSHEIRAVKHLLVVMYDMIESKFSNLHNEISFLKNGTFRL 60
Query: 187 LSNLQNNTIRTWDAVVKNGKKISISTKKL 273
LQN+T + ++ N KI + K+
Sbjct: 61 FEQLQNSTKHSIKLIMNNSNKIDVLNNKI 89
>UniRef50_A1YJ03 Cluster: Gp16; n=5; Nucleopolyhedrovirus|Rep: Gp16
- Spodoptera frugiperda nuclear polyhedrosis virus
(SfNPV)
Length = 97
Score = 49.2 bits (112), Expect = 9e-05
Identities = 26/89 (29%), Positives = 41/89 (46%)
Frame = +1
Query: 7 MNFWATFSICLVGYLVYAGHLNNELQEIKSILVVMYESMEKHFSNVVDEIDSLKTDTFMM 186
MNF + L YL YA + NE+ +K L+++YE+ F +V +
Sbjct: 2 MNFSGAALVLLAAYLWYANSMANEINLVKKFLLLIYETTTTKFDDVTKLMSDYHETIVQN 61
Query: 187 LSNLQNNTIRTWDAVVKNGKKISISTKKL 273
L L N T + D +V N +KI + K+
Sbjct: 62 LEKLHNMTKHSIDLIVINSRKIDVINGKI 90
>UniRef50_Q8WQX0 Cluster: Serine proteinase inhibitor serpin-2; n=4;
Ixodidae|Rep: Serine proteinase inhibitor serpin-2 -
Rhipicephalus appendiculatus (Brown ear tick)
Length = 380
Score = 37.1 bits (82), Expect = 0.40
Identities = 20/75 (26%), Positives = 36/75 (48%), Gaps = 3/75 (4%)
Frame = +1
Query: 13 FWATFSICLVGYLVYAGHLNNELQEIKSILVVMYESMEKHFSNVVDEIDSLKTDTFMMLS 192
F++ FSI + AG NN ++I L V E + KHF++ + + D + ++
Sbjct: 33 FYSPFSIAAALSMALAGARNNTAKQIADALHVNSEEVHKHFASFMSRLSGFAPDVKLHVA 92
Query: 193 N---LQNNTIRTWDA 228
N + + R+W A
Sbjct: 93 NRMYSEQTSFRSWKA 107
>UniRef50_A5UN47 Cluster: Helicase, UvrD/REP family; n=1;
Methanobrevibacter smithii ATCC 35061|Rep: Helicase,
UvrD/REP family - Methanobrevibacter smithii (strain PS
/ ATCC 35061 / DSM 861)
Length = 661
Score = 35.9 bits (79), Expect = 0.93
Identities = 20/48 (41%), Positives = 28/48 (58%)
Frame = +1
Query: 154 IDSLKTDTFMMLSNLQNNTIRTWDAVVKNGKKISISTKKLTCY*QKTG 297
+ LKTD + L NL++N + T + KNG++ I T KL C KTG
Sbjct: 481 VQELKTDANVELLNLEHNRLETLKNIEKNGERYVIPT-KLKCPVCKTG 527
>UniRef50_UPI0000E47588 Cluster: PREDICTED: similar to centrosome
protein 4, partial; n=1; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to centrosome protein
4, partial - Strongylocentrotus purpuratus
Length = 1062
Score = 34.3 bits (75), Expect = 2.8
Identities = 25/73 (34%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
Frame = +1
Query: 67 LNNELQEIKSILVVMYESMEKHFSNVVDEIDSLKTDTFMM---LSNLQNNTIRTWDAVVK 237
+ +EIK L V E + + N++D+IDSL+TD + L LQN T D + +
Sbjct: 248 IRGSTREIKD-LEVEVEQLRQERKNLLDDIDSLRTDGAVKHQDLKRLQNLT----DKIQE 302
Query: 238 NGKKISISTKKLT 276
+ +K+S KLT
Sbjct: 303 DKRKLSHQVNKLT 315
>UniRef50_Q75AA9 Cluster: ADR009Wp; n=1; Eremothecium gossypii|Rep:
ADR009Wp - Ashbya gossypii (Yeast) (Eremothecium
gossypii)
Length = 490
Score = 33.9 bits (74), Expect = 3.7
Identities = 28/110 (25%), Positives = 47/110 (42%), Gaps = 3/110 (2%)
Frame = +1
Query: 139 NVVDEIDSLKTDTFMMLSNLQNNTIRTWDAVVKNGKKISISTKKLTCY*QKTG*LTTCLT 318
N +D+IDS+K + N+ NTI++W + G + I+ + T T
Sbjct: 235 NSIDDIDSVKLPKTLKTFNVSQNTIKSWQSQSLKGLQTLIAANNIIADIPPDP-CPTIRT 293
Query: 319 FNKRYLSLS*YTKNHIVATIF*NM---KPTNNVMFDDASVLWIDTDYIYQ 459
+ Y +++ + T+F NM + NN+ D DTD YQ
Sbjct: 294 LDLSYNNIALWDVVDKFQTVFPNMHDLRINNNIFSSDEE----DTDEFYQ 339
>UniRef50_O80618 Cluster: Predicted by genefinder and genscan; n=5;
core eudicotyledons|Rep: Predicted by genefinder and
genscan - Arabidopsis thaliana (Mouse-ear cress)
Length = 284
Score = 33.1 bits (72), Expect = 6.5
Identities = 19/73 (26%), Positives = 37/73 (50%)
Frame = -3
Query: 609 RSQIKRTLRKSPPVLDRVYDTIRPHRXSFFYV*MDGEQKLLKRLQRHF*ILINVIRVDPK 430
R ++ + + +SP +L D + FF M G+ K LKR ++F + ++ P+
Sbjct: 187 REEVAKMVVRSPALLTYSVDNNLVPKVEFFIEEMRGDVKELKRFPQYFSFSLE-RKIKPR 245
Query: 429 NRRVVEHNVIRRL 391
+R + EH ++ L
Sbjct: 246 HRLLKEHGILMPL 258
>UniRef50_A6NU23 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 1479
Score = 32.7 bits (71), Expect = 8.6
Identities = 27/108 (25%), Positives = 48/108 (44%), Gaps = 1/108 (0%)
Frame = +1
Query: 109 MYESMEKHFSNV-VDEIDSLKTDTFMMLSNLQNNTIRTWDAVVKNGKKISISTKKLTCY* 285
+Y S++ S V E +L D + S LQN + N +++S +
Sbjct: 1156 LYASLDDALSAVKTGETLTLHADATVSPSTLQNAVTGKTVTIDVNSNALTVSGTSTSVVL 1215
Query: 286 QKTG*LTTCLTFNKRYLSLS*YTKNHIVATIF*NMKPTNNVMFDDASV 429
+K+G T LT L+L+ NH A N+K ++++ +D +V
Sbjct: 1216 EKSGDAATALTIKNGTLNLN----NHTGANAAINIKTDSSIVLEDLTV 1259
>UniRef50_Q7XPG9 Cluster: OSJNBb0003B01.14 protein; n=20; Oryza
sativa|Rep: OSJNBb0003B01.14 protein - Oryza sativa
(Rice)
Length = 1728
Score = 32.7 bits (71), Expect = 8.6
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = -1
Query: 182 INVSVLRESISSTTLEKCFSIDSYMTTSIDFISCS 78
I +++L +S +CF YM TSI FI C+
Sbjct: 407 IKINILDHEVSERNYVECFKQQGYMNTSIMFIQCA 441
>UniRef50_A0DE75 Cluster: Chromosome undetermined scaffold_47, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_47,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 1039
Score = 32.7 bits (71), Expect = 8.6
Identities = 20/64 (31%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Frame = +1
Query: 55 YAGHLNNELQEIKSILVVMYESMEKHFSNVVDEID---SLKTDTFMMLSNLQNNTIRTWD 225
Y+ LN + QE + L + ++ E+ F + + EID SL + L ++QNNT++ D
Sbjct: 614 YSEQLNTQKQEYEK-LKIKFQKQEQDFESKLVEIDTKNSLIAELQQKLESIQNNTVKLKD 672
Query: 226 AVVK 237
+ K
Sbjct: 673 DLNK 676
>UniRef50_A7F1R9 Cluster: Putative uncharacterized protein; n=1;
Sclerotinia sclerotiorum 1980|Rep: Putative
uncharacterized protein - Sclerotinia sclerotiorum 1980
Length = 432
Score = 32.7 bits (71), Expect = 8.6
Identities = 16/60 (26%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Frame = +1
Query: 55 YAGHLNNELQEIK---SILVVMYESMEKHFSNVVDEIDSLKTDTFMMLSNLQNNTIRTWD 225
Y L L+E++ ++L +YES++ ++V E+D + D + S+ +N +R W+
Sbjct: 344 YMRELEQRLRELEGRYNVLSRLYESLQLEVTSVKQELDRMGKDNSRVESSTRNCQVREWE 403
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 620,079,418
Number of Sequences: 1657284
Number of extensions: 11482407
Number of successful extensions: 30434
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 29368
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30424
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 53719013270
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -