Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120820.seq
         (686 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY052395-1|AAL15469.1|   76|Tribolium castaneum tryptophan oxyge...    24   1.3  
AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan oxyge...    24   1.3  
AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan oxyge...    24   1.3  
AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine recombi...    23   2.3  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   3.1  
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    23   3.1  
AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    21   7.2  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   7.2  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    21   7.2  

>AY052395-1|AAL15469.1|   76|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 76

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 8/33 (24%), Positives = 20/33 (60%)
 Frame = +1

Query: 70  NNELQEIKSILVVMYESMEKHFSNVVDEIDSLK 168
           NN+    + + +V +++ E  F  ++ E+DS++
Sbjct: 44  NNQPVHDEHLFIVTHQAYELWFKQIIYELDSIR 76


>AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 8/33 (24%), Positives = 20/33 (60%)
 Frame = +1

Query: 70  NNELQEIKSILVVMYESMEKHFSNVVDEIDSLK 168
           NN+    + + +V +++ E  F  ++ E+DS++
Sbjct: 44  NNQPVHDEHLFIVTHQAYELWFKQIIYELDSIR 76


>AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 8/33 (24%), Positives = 20/33 (60%)
 Frame = +1

Query: 70  NNELQEIKSILVVMYESMEKHFSNVVDEIDSLK 168
           NN+    + + +V +++ E  F  ++ E+DS++
Sbjct: 44  NNQPVHDEHLFIVTHQAYELWFKQIIYELDSIR 76


>AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine
           recombinase protein.
          Length = 340

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = -2

Query: 655 LXAIKVLSNWSATSKXFANQTDAP 584
           L  I+  + WSATS+ FA   + P
Sbjct: 304 LDLIRKTAGWSATSRVFATFYNKP 327


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
 Frame = +1

Query: 340 LS*YTKNHI-VATIF*NMKPTNNVMFDDASVLWIDTDYIYQNLKMPLQAFQQLLFTIH 510
           +S YTK    +  I  ++  T  +MFD  +VL +     YQ+L   L+ F  +   +H
Sbjct: 480 VSNYTKQQSKIHLIVRSVFVTTYLMFDYCTVLRVQRFNNYQSLAHYLRVFFTVFNVVH 537


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 12/45 (26%), Positives = 22/45 (48%)
 Frame = +1

Query: 46  YLVYAGHLNNELQEIKSILVVMYESMEKHFSNVVDEIDSLKTDTF 180
           + +Y  H  +  ++I++ + +    +EK     V  I SL  DTF
Sbjct: 279 FAIYEMHWYDASKQIQNEVFIFMGQLEKPIVFYVANIFSLDLDTF 323


>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 7/22 (31%), Positives = 10/22 (45%)
 Frame = +3

Query: 501 HHPSKHRKMIXDAGGSCHKHGP 566
           HH  +H       G + H+ GP
Sbjct: 182 HHQQQHMMYGGQQGANMHQQGP 203


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 6/17 (35%), Positives = 13/17 (76%)
 Frame = -2

Query: 292 FFVNSTLIFSSRLIFFC 242
           +F ++ +IF+  L+F+C
Sbjct: 214 YFYSAFIIFTIHLLFYC 230


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 7/22 (31%), Positives = 10/22 (45%)
 Frame = +3

Query: 501 HHPSKHRKMIXDAGGSCHKHGP 566
           HH  +H       G + H+ GP
Sbjct: 184 HHQQQHMMYGGQQGANMHQQGP 205


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,527
Number of Sequences: 336
Number of extensions: 3313
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18010165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)