Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120819.seq
         (686 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q06906 Cluster: Occlusion-derived virus envelope protei...   117   3e-25
UniRef50_Q77K60 Cluster: Odv-e25; n=26; Baculoviridae|Rep: Odv-e...    68   2e-10
UniRef50_Q7T9T8 Cluster: Odv-e25; n=2; Granulovirus|Rep: Odv-e25...    46   9e-04
UniRef50_Q9C754 Cluster: Putative uncharacterized protein F12P21...    35   1.6  
UniRef50_A0DBE4 Cluster: Chromosome undetermined scaffold_44, wh...    35   2.1  
UniRef50_Q7RCT1 Cluster: Peroxisomal-coenzyme a synthetase; n=5;...    33   4.9  
UniRef50_A5WE88 Cluster: Hemolysin-type calcium-binding region; ...    33   6.5  

>UniRef50_Q06906 Cluster: Occlusion-derived virus envelope protein
           E25; n=14; Nucleopolyhedrovirus|Rep: Occlusion-derived
           virus envelope protein E25 - Orgyia pseudotsugata
           multicapsid polyhedrosis virus (OpMNPV)
          Length = 229

 Score =  117 bits (281), Expect = 3e-25
 Identities = 63/131 (48%), Positives = 87/131 (66%), Gaps = 3/131 (2%)
 Frame = +2

Query: 254 SEKPLSIDDIVKEGSNKVGTNSIFLGTVYDYGVKSPNAASTSSNVTMTRGTANFDIKEFK 433
           +EKP+S+DDI K+G+ +VG NS+F+GTVYD GV+SPNA   S++VT+TR TANFD+KE+K
Sbjct: 78  AEKPMSMDDIEKQGNARVGANSLFIGTVYDQGVRSPNAPGASNDVTVTRTTANFDVKEYK 137

Query: 434 SMFIVFKGITPTKTVEDNGMLRFEVTA*LCA*STPTRGRXPNEKCANCANPTALXCT--- 604
           +MFIV KG+ P K  +++ ML F V   L            +E+      P+A  CT   
Sbjct: 138 NMFIVVKGLPPAKMTKEDNMLCFTVDG-LHVCLVDANAAPLSERVFARLPPSA--CTLVY 194

Query: 605 RKNEAAQQVLL 637
            +N AAQQ+LL
Sbjct: 195 TRNSAAQQLLL 205



 Score = 75.8 bits (178), Expect = 9e-13
 Identities = 36/60 (60%), Positives = 49/60 (81%), Gaps = 2/60 (3%)
 Frame = +3

Query: 81  WTNA-LNLNSLTEASPSLGQSSESVESD-ENKRLNVKLNNARVANLRIAHGDNKLSQMYI 254
           W N  LNLNSLTE+SPSL QSS+SV+ D + ++LNVKL N ++  +R+AHGDNK+SQ+Y+
Sbjct: 18  WYNGKLNLNSLTESSPSLAQSSDSVQVDPQTEQLNVKLGNNKMTYMRVAHGDNKVSQVYV 77


>UniRef50_Q77K60 Cluster: Odv-e25; n=26; Baculoviridae|Rep: Odv-e25
           - Helicoverpa armigera NPV
          Length = 230

 Score = 68.1 bits (159), Expect = 2e-10
 Identities = 36/92 (39%), Positives = 53/92 (57%), Gaps = 8/92 (8%)
 Frame = +2

Query: 254 SEKPLSIDDIVKEGSNKVGTNSIFLGTVYDYGVKSP--------NAASTSSNVTMTRGTA 409
           +E+PL+  +I+ EG+  VG N +F+GT+ +    S          +A +S   T  R TA
Sbjct: 75  AERPLTYSEIIDEGNRTVGANCVFMGTISEPSQTSTLNQQQQQQQSAGSSLPTTANRVTA 134

Query: 410 NFDIKEFKSMFIVFKGITPTKTVEDNGMLRFE 505
           NFDIK+FK+ FIVFK +   K  E   M+R+E
Sbjct: 135 NFDIKQFKNTFIVFKNVEMIKIKESANMVRYE 166



 Score = 52.4 bits (120), Expect = 1e-05
 Identities = 24/56 (42%), Positives = 38/56 (67%)
 Frame = +3

Query: 87  NALNLNSLTEASPSLGQSSESVESDENKRLNVKLNNARVANLRIAHGDNKLSQMYI 254
           N LN +SL ++S   GQSSES+  +   +L +K N+ R+  +RI HGDNK+S++ +
Sbjct: 22  NKLNFDSLNDSS---GQSSESIRENNQGQLTLKFNSPRIKTMRILHGDNKISKVCV 74


>UniRef50_Q7T9T8 Cluster: Odv-e25; n=2; Granulovirus|Rep: Odv-e25 -
           Adoxophyes orana granulovirus (AoGV)
          Length = 217

 Score = 46.0 bits (104), Expect = 9e-04
 Identities = 28/84 (33%), Positives = 48/84 (57%)
 Frame = +2

Query: 257 EKPLSIDDIVKEGSNKVGTNSIFLGTVYDYGVKSPNAASTSSNVTMTRGTANFDIKEFKS 436
           E P+  + I++ G +K G N+I LG + +      N  +++ N   TR + N  IK+FK+
Sbjct: 76  ETPIRHEQIIEHG-DKAGANTICLGIIKEN--LGSNVGNSNVN---TRFSNNLTIKQFKN 129

Query: 437 MFIVFKGITPTKTVEDNGMLRFEV 508
           +FI FKG+   +   +  M+R+EV
Sbjct: 130 LFITFKGLDYVEIDSNMYMVRYEV 153



 Score = 39.5 bits (88), Expect = 0.075
 Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
 Frame = +3

Query: 81  WTN-ALNLNSLTEASPSLGQSSESVESDENKRLNVKLNNARVANLRIAHGDNKLSQM 248
           W N  LN NSL  +S S G   +S++       NV  NN +  N+RIA+G+N  S++
Sbjct: 19  WVNDKLNANSLNTSSESSG---DSIQFTPEGNANVIFNNTKSKNVRIAYGENNFSKI 72


>UniRef50_Q9C754 Cluster: Putative uncharacterized protein F12P21.9;
           n=1; Arabidopsis thaliana|Rep: Putative uncharacterized
           protein F12P21.9 - Arabidopsis thaliana (Mouse-ear
           cress)
          Length = 97

 Score = 35.1 bits (77), Expect = 1.6
 Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 7/76 (9%)
 Frame = +2

Query: 248 VYSEKPLSIDDIVKEGSNKVGTNSIFLGTVYDYGVKSP-------NAASTSSNVTMTRGT 406
           V   +   + D +KE   +VGT+SIF  +     + SP       + +S S++ + T G 
Sbjct: 21  VMRRRTAKVLDTIKEEEREVGTDSIFPSSFNSKKISSPFTSPYSSSVSSASASASCTSGL 80

Query: 407 ANFDIKEFKSMFIVFK 454
             F + E +  F VFK
Sbjct: 81  NKFPVTENRGSFPVFK 96


>UniRef50_A0DBE4 Cluster: Chromosome undetermined scaffold_44, whole
           genome shotgun sequence; n=2; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_44,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 1155

 Score = 34.7 bits (76), Expect = 2.1
 Identities = 18/57 (31%), Positives = 29/57 (50%)
 Frame = +3

Query: 87  NALNLNSLTEASPSLGQSSESVESDENKRLNVKLNNARVANLRIAHGDNKLSQMYIP 257
           N +  N L E +  + Q +  +++ E +R   KLNN    NL+I + +NKL     P
Sbjct: 544 NLIQQNKLQEQNVQIQQLTVQIQNMEEQRNEFKLNNQIFQNLKIKYVNNKLHNNQYP 600


>UniRef50_Q7RCT1 Cluster: Peroxisomal-coenzyme a synthetase; n=5;
           Plasmodium (Vinckeia)|Rep: Peroxisomal-coenzyme a
           synthetase - Plasmodium yoelii yoelii
          Length = 1377

 Score = 33.5 bits (73), Expect = 4.9
 Identities = 21/64 (32%), Positives = 28/64 (43%), Gaps = 3/64 (4%)
 Frame = +3

Query: 87  NALNLNSLTEASPSL---GQSSESVESDENKRLNVKLNNARVANLRIAHGDNKLSQMYIP 257
           N LN  SL E +  +     S E  E D NK + + LNN         H   +L+   +P
Sbjct: 550 NKLNSGSLKEGNKMIENNDNSKEETEFDVNKSIELNLNNFHKRYELTEHMRKELADFKVP 609

Query: 258 KNRY 269
           KN Y
Sbjct: 610 KNIY 613


>UniRef50_A5WE88 Cluster: Hemolysin-type calcium-binding region;
           n=1; Psychrobacter sp. PRwf-1|Rep: Hemolysin-type
           calcium-binding region - Psychrobacter sp. PRwf-1
          Length = 1529

 Score = 33.1 bits (72), Expect = 6.5
 Identities = 19/72 (26%), Positives = 34/72 (47%)
 Frame = +2

Query: 296 SNKVGTNSIFLGTVYDYGVKSPNAASTSSNVTMTRGTANFDIKEFKSMFIVFKGITPTKT 475
           + + GT++   G V    + S N  S S ++T   G   FDI E   + +  KG++    
Sbjct: 279 NQEAGTDTEETGLVIGEVIASDNRGSVSYSITAGNGKGYFDINEKGQIALTQKGLSSEAN 338

Query: 476 VEDNGMLRFEVT 511
             + G+  F++T
Sbjct: 339 DFELGLNEFDLT 350


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 658,318,042
Number of Sequences: 1657284
Number of extensions: 13102657
Number of successful extensions: 35379
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 34190
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35369
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 53719013270
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)