BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= NV120816.seq (533 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPCC794.09c |ef1a-a||translation elongation factor EF-1 alpha Ef... 155 3e-39 SPAC23A1.10 |ef1a-b||translation elongation factor EF-1 alpha Ef... 155 4e-39 SPBC839.15c |ef1a-c||translation elongation factor EF-1 alpha Ef... 155 4e-39 SPCC584.04 |sup35|erf3|translation release factor eRF3 |Schizosa... 91 7e-20 SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related prote... 85 5e-18 SPBC9B6.04c |tuf1||mitochondrial translation elongation factor E... 66 3e-12 SPCP31B10.07 |eft202||translation elongation factor 2 |Schizosac... 36 0.005 SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation elon... 36 0.005 SPBC1306.01c ||SPBC409.22c|translation elongation factor G|Schiz... 34 0.012 SPBC1271.15c |||translation initiation factor IF-2Mt|Schizosacch... 33 0.020 SPBC17G9.09 |tif213||translation initiation factor eIF2 gamma su... 33 0.027 SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces po... 31 0.14 SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr 3|||Ma... 30 0.19 SPAC56F8.03 |||translation initiation factor IF2 |Schizosaccharo... 29 0.33 SPBC660.10 |||translation elongation factor G|Schizosaccharomyce... 29 0.58 SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyce... 28 0.76 SPBC1703.06 |pof10||F-box protein Pof10|Schizosaccharomyces pomb... 27 1.8 SPAC1093.01 ||SPAC12B10.18|PPR repeat protein|Schizosaccharomyce... 26 3.1 SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomy... 26 4.1 SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr 1||... 25 5.4 SPCC16A11.12c |ubp1||ubiquitin C-terminal hydrolase Ubp1|Schizos... 25 7.1 SPBC1703.13c |||inorganic phosphate transporter |Schizosaccharom... 25 7.1 SPAC1687.08 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 25 9.4 >SPCC794.09c |ef1a-a||translation elongation factor EF-1 alpha Ef1a-a |Schizosaccharomyces pombe|chr 3|||Manual Length = 460 Score = 155 bits (377), Expect = 3e-39 Identities = 74/87 (85%), Positives = 78/87 (89%) Frame = +3 Query: 255 IDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQ 434 IDIALWKFET KY VT+IDAPGHRDFIKNMITGTSQADCAVLI+ GTGEFEAGISK+GQ Sbjct: 73 IDIALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQADCAVLIIGGGTGEFEAGISKDGQ 132 Query: 435 TREHALLAFTXCVKQLIVGVNKMVFTG 515 TREHALLA+T VKQLIV VNKM TG Sbjct: 133 TREHALLAYTLGVKQLIVAVNKMDTTG 159 Score = 141 bits (341), Expect = 7e-35 Identities = 64/68 (94%), Positives = 66/68 (97%) Frame = +2 Query: 41 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 220 MGKEK HIN+VVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEA E+GKGSFKYAWVL Sbjct: 1 MGKEKGHINVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEATELGKGSFKYAWVL 60 Query: 221 DKLKAERE 244 DKLKAERE Sbjct: 61 DKLKAERE 68 >SPAC23A1.10 |ef1a-b||translation elongation factor EF-1 alpha Ef1a-b |Schizosaccharomyces pombe|chr 1|||Manual Length = 460 Score = 155 bits (376), Expect = 4e-39 Identities = 73/87 (83%), Positives = 78/87 (89%) Frame = +3 Query: 255 IDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQ 434 IDIALWKFET KY VT+IDAPGHRDFIKNMITGTSQADCA+LI+ GTGEFEAGISK+GQ Sbjct: 73 IDIALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQADCAILIIGGGTGEFEAGISKDGQ 132 Query: 435 TREHALLAFTXCVKQLIVGVNKMVFTG 515 TREHALLA+T VKQLIV VNKM TG Sbjct: 133 TREHALLAYTLGVKQLIVAVNKMDTTG 159 Score = 141 bits (341), Expect = 7e-35 Identities = 64/68 (94%), Positives = 66/68 (97%) Frame = +2 Query: 41 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 220 MGKEK HIN+VVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEA E+GKGSFKYAWVL Sbjct: 1 MGKEKGHINVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEATELGKGSFKYAWVL 60 Query: 221 DKLKAERE 244 DKLKAERE Sbjct: 61 DKLKAERE 68 >SPBC839.15c |ef1a-c||translation elongation factor EF-1 alpha Ef1a-c |Schizosaccharomyces pombe|chr 2|||Manual Length = 460 Score = 155 bits (376), Expect = 4e-39 Identities = 73/87 (83%), Positives = 78/87 (89%) Frame = +3 Query: 255 IDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQ 434 IDIALWKFET KY VT+IDAPGHRDFIKNMITGTSQADCA+LI+ GTGEFEAGISK+GQ Sbjct: 73 IDIALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQADCAILIIGGGTGEFEAGISKDGQ 132 Query: 435 TREHALLAFTXCVKQLIVGVNKMVFTG 515 TREHALLA+T VKQLIV VNKM TG Sbjct: 133 TREHALLAYTLGVKQLIVAVNKMDTTG 159 Score = 141 bits (341), Expect = 7e-35 Identities = 64/68 (94%), Positives = 66/68 (97%) Frame = +2 Query: 41 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 220 MGKEK HIN+VVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEA E+GKGSFKYAWVL Sbjct: 1 MGKEKGHINVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEATELGKGSFKYAWVL 60 Query: 221 DKLKAERE 244 DKLKAERE Sbjct: 61 DKLKAERE 68 >SPCC584.04 |sup35|erf3|translation release factor eRF3 |Schizosaccharomyces pombe|chr 3|||Manual Length = 662 Score = 91.5 bits (217), Expect = 7e-20 Identities = 40/83 (48%), Positives = 57/83 (68%) Frame = +3 Query: 255 IDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQ 434 +++ FET +++DAPGH+ ++ NMI G SQAD VL+++A GEFEAG + GQ Sbjct: 304 VEVGRAYFETEHRRFSLLDAPGHKGYVTNMINGASQADIGVLVISARRGEFEAGFERGGQ 363 Query: 435 TREHALLAFTXCVKQLIVGVNKM 503 TREHA+LA T + L+V +NKM Sbjct: 364 TREHAVLARTQGINHLVVVINKM 386 Score = 80.6 bits (190), Expect = 1e-16 Identities = 35/64 (54%), Positives = 47/64 (73%) Frame = +2 Query: 53 KTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLK 232 K H+NIV IGHVD+GKST G++++ G +DKRT+EK E+EA+E GK S+ +W LD Sbjct: 236 KEHVNIVFIGHVDAGKSTLGGNILFLTGMVDKRTMEKIEREAKEAGKESWYLSWALDSTS 295 Query: 233 AERE 244 ERE Sbjct: 296 EERE 299 >SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related protein|Schizosaccharomyces pombe|chr 2|||Manual Length = 592 Score = 85.4 bits (202), Expect = 5e-18 Identities = 41/83 (49%), Positives = 52/83 (62%) Frame = +3 Query: 255 IDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQ 434 +D+A FE+ K I DAPGHRDFI MI G S AD AVL+V + FE G +NGQ Sbjct: 243 MDVASTTFESDKKIYEIGDAPGHRDFISGMIAGASSADFAVLVVDSSQNNFERGFLENGQ 302 Query: 435 TREHALLAFTXCVKQLIVGVNKM 503 TREHA L + +++V VNK+ Sbjct: 303 TREHAYLLRALGISEIVVSVNKL 325 Score = 72.5 bits (170), Expect = 4e-14 Identities = 31/63 (49%), Positives = 44/63 (69%) Frame = +2 Query: 53 KTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLK 232 K +++VV GHVDSGKST G ++++ G I+ R+++K EA GKGSF YAW+LD + Sbjct: 175 KPVVHLVVTGHVDSGKSTMLGRIMFELGEINSRSMQKLHNEAANSGKGSFSYAWLLDTTE 234 Query: 233 AER 241 ER Sbjct: 235 EER 237 >SPBC9B6.04c |tuf1||mitochondrial translation elongation factor EF-Tu Tuf1 |Schizosaccharomyces pombe|chr 2|||Manual Length = 439 Score = 66.1 bits (154), Expect = 3e-12 Identities = 33/77 (42%), Positives = 49/77 (63%) Frame = +3 Query: 273 KFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHAL 452 ++ET+ + +D PGH D+IKNMITG + D A+++V+A G+ QTREH L Sbjct: 110 EYETANRHYAHVDCPGHADYIKNMITGAATMDGAIIVVSATDGQMP-------QTREHLL 162 Query: 453 LAFTXCVKQLIVGVNKM 503 LA VKQ++V +NK+ Sbjct: 163 LARQVGVKQIVVYINKV 179 Score = 35.1 bits (77), Expect = 0.007 Identities = 16/29 (55%), Positives = 20/29 (68%) Frame = +2 Query: 47 KEKTHINIVVIGHVDSGKSTTTGHLIYKC 133 ++K H+NI IGHVD GK+T T I KC Sbjct: 49 RKKPHVNIGTIGHVDHGKTTLTA-AITKC 76 >SPCP31B10.07 |eft202||translation elongation factor 2 |Schizosaccharomyces pombe|chr 3|||Manual Length = 842 Score = 35.5 bits (78), Expect = 0.005 Identities = 17/32 (53%), Positives = 19/32 (59%) Frame = +2 Query: 41 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCG 136 MGK N+ VI HVD GKST T L+ K G Sbjct: 13 MGKPSNVRNMSVIAHVDHGKSTLTDSLVQKAG 44 Score = 27.9 bits (59), Expect = 1.0 Identities = 11/32 (34%), Positives = 18/32 (56%) Frame = +3 Query: 291 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 386 + V +ID+PGH DF + D A+++V Sbjct: 98 FLVNLIDSPGHVDFSSEVTAALRVTDGALVVV 129 >SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation elongation factor 2 |Schizosaccharomyces pombe|chr 1|||Manual Length = 842 Score = 35.5 bits (78), Expect = 0.005 Identities = 17/32 (53%), Positives = 19/32 (59%) Frame = +2 Query: 41 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCG 136 MGK N+ VI HVD GKST T L+ K G Sbjct: 13 MGKPSNVRNMSVIAHVDHGKSTLTDSLVQKAG 44 Score = 27.9 bits (59), Expect = 1.0 Identities = 11/32 (34%), Positives = 18/32 (56%) Frame = +3 Query: 291 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 386 + V +ID+PGH DF + D A+++V Sbjct: 98 FLVNLIDSPGHVDFSSEVTAALRVTDGALVVV 129 >SPBC1306.01c ||SPBC409.22c|translation elongation factor G|Schizosaccharomyces pombe|chr 2|||Manual Length = 770 Score = 34.3 bits (75), Expect = 0.012 Identities = 21/57 (36%), Positives = 29/57 (50%) Frame = +3 Query: 276 FETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREH 446 FE S Y + IID PGH DF + D AVL++ A +G I+ + Q R + Sbjct: 141 FEKS-YNINIIDTPGHIDFTIEVERALRVLDGAVLVLCAVSGVQSQTITVDRQMRRY 196 Score = 29.1 bits (62), Expect = 0.44 Identities = 12/26 (46%), Positives = 17/26 (65%) Frame = +2 Query: 65 NIVVIGHVDSGKSTTTGHLIYKCGGI 142 NI + H+DSGK+T T ++Y G I Sbjct: 61 NIGISAHIDSGKTTFTERVLYYTGRI 86 >SPBC1271.15c |||translation initiation factor IF-2Mt|Schizosaccharomyces pombe|chr 2|||Manual Length = 686 Score = 33.5 bits (73), Expect = 0.020 Identities = 15/42 (35%), Positives = 21/42 (50%) Frame = +3 Query: 276 FETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 401 F+ ++T +D PGH F G + AD VL+VA G Sbjct: 215 FDKGSKFITFLDTPGHMAFEAMRKRGANIADIVVLVVAGDDG 256 >SPBC17G9.09 |tif213||translation initiation factor eIF2 gamma subunit|Schizosaccharomyces pombe|chr 2|||Manual Length = 446 Score = 33.1 bits (72), Expect = 0.027 Identities = 19/70 (27%), Positives = 32/70 (45%) Frame = +3 Query: 294 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTXCV 473 +V+ +D PGH + M+ G + D A+L++A QT EH + Sbjct: 109 HVSFVDCPGHDILMATMLNGAAVMDAALLLIAGNES------CPQPQTSEHLAAIEIMQL 162 Query: 474 KQLIVGVNKM 503 K +I+ NK+ Sbjct: 163 KHIIILQNKV 172 Score = 25.0 bits (52), Expect = 7.1 Identities = 12/24 (50%), Positives = 14/24 (58%) Frame = +2 Query: 35 PKMGKEKTHINIVVIGHVDSGKST 106 P + + INI IGHV GKST Sbjct: 15 PAIISRQATINIGTIGHVAHGKST 38 >SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces pombe|chr 1|||Manual Length = 646 Score = 30.7 bits (66), Expect = 0.14 Identities = 12/45 (26%), Positives = 23/45 (51%) Frame = +3 Query: 267 LWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 401 ++ + Y + +ID PGH DF ++ + + +L+V A G Sbjct: 116 IYYYHGQSYLLNLIDTPGHVDFRAEVMHSLAACEGCILLVDASQG 160 Score = 24.6 bits (51), Expect = 9.4 Identities = 11/28 (39%), Positives = 17/28 (60%) Frame = +2 Query: 65 NIVVIGHVDSGKSTTTGHLIYKCGGIDK 148 N VI H+D GKST + ++ G I++ Sbjct: 60 NWAVIAHIDHGKSTLSDCILKLTGVINE 87 >SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr 3|||Manual Length = 1000 Score = 30.3 bits (65), Expect = 0.19 Identities = 13/37 (35%), Positives = 21/37 (56%) Frame = +3 Query: 291 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 401 Y + +ID+PGH DF + + + D A ++V A G Sbjct: 94 YLINLIDSPGHVDFSSEVSSASRLCDGAFVLVDAVEG 130 >SPAC56F8.03 |||translation initiation factor IF2 |Schizosaccharomyces pombe|chr 1|||Manual Length = 1079 Score = 29.5 bits (63), Expect = 0.33 Identities = 12/28 (42%), Positives = 16/28 (57%) Frame = +3 Query: 303 IIDAPGHRDFIKNMITGTSQADCAVLIV 386 IID PGH F GTS + A+L++ Sbjct: 553 IIDTPGHESFTNLRSRGTSLCNIAILVI 580 >SPBC660.10 |||translation elongation factor G|Schizosaccharomyces pombe|chr 2|||Manual Length = 813 Score = 28.7 bits (61), Expect = 0.58 Identities = 10/24 (41%), Positives = 17/24 (70%) Frame = +2 Query: 65 NIVVIGHVDSGKSTTTGHLIYKCG 136 N+ +I H+D+GK+T T ++Y G Sbjct: 30 NVGIIAHIDAGKTTLTEKMLYYGG 53 Score = 28.7 bits (61), Expect = 0.58 Identities = 15/49 (30%), Positives = 21/49 (42%) Frame = +3 Query: 255 IDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 401 I+ A F + +ID PGH DF + + D AV I+ G Sbjct: 81 INSAAISFTWRNQRINLIDTPGHADFTFEVERSVAVLDGAVAIIDGSAG 129 >SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyces pombe|chr 2|||Manual Length = 983 Score = 28.3 bits (60), Expect = 0.76 Identities = 13/51 (25%), Positives = 25/51 (49%) Frame = +3 Query: 234 LSVSRYHIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 386 +S+ + +A+ + + ID PGH DF+ + + +D VL+V Sbjct: 190 MSIKSTPLTLAVSDMKGKTFAFQCIDTPGHVDFVDEVAAPMAISDGVVLVV 240 >SPBC1703.06 |pof10||F-box protein Pof10|Schizosaccharomyces pombe|chr 2|||Manual Length = 662 Score = 27.1 bits (57), Expect = 1.8 Identities = 19/62 (30%), Positives = 24/62 (38%) Frame = -1 Query: 284 SFELPESNIDVIPTHAQPLVCPIPKHI*RILYPFPGPPSRTSRWYVCQYHHICRSSDQWW 105 S L N D + V +PK I I++ F P S S C+Y S D W Sbjct: 12 SSNLRRMNRDHSSNNTNRTVLNLPKEILIIIFSFLDPRSLLSAQCTCKYWKKLLSDDLSW 71 Query: 104 WT 99 T Sbjct: 72 RT 73 >SPAC1093.01 ||SPAC12B10.18|PPR repeat protein|Schizosaccharomyces pombe|chr 1|||Manual Length = 1261 Score = 26.2 bits (55), Expect = 3.1 Identities = 7/19 (36%), Positives = 13/19 (68%) Frame = -1 Query: 263 NIDVIPTHAQPLVCPIPKH 207 N+D++ HA P++C + H Sbjct: 531 NVDLLHLHAYPVICSVSSH 549 >SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomyces pombe|chr 3|||Manual Length = 1115 Score = 25.8 bits (54), Expect = 4.1 Identities = 14/39 (35%), Positives = 21/39 (53%) Frame = +2 Query: 146 KRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERESVSHRY 262 +R IEKFEK +E + + ++KL E +S RY Sbjct: 577 EREIEKFEKTIRENEESISLFKEEVEKLTDEITQLSERY 615 >SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr 1|||Manual Length = 380 Score = 25.4 bits (53), Expect = 5.4 Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 2/31 (6%) Frame = +3 Query: 255 IDIALWKFETSKYYV--TIIDAPGHRDFIKN 341 I+I + E +++ T+ID PG DFI N Sbjct: 73 IEITKAELEEKNFHLRLTVIDTPGFGDFINN 103 >SPCC16A11.12c |ubp1||ubiquitin C-terminal hydrolase Ubp1|Schizosaccharomyces pombe|chr 3|||Manual Length = 849 Score = 25.0 bits (52), Expect = 7.1 Identities = 12/45 (26%), Positives = 22/45 (48%) Frame = +2 Query: 140 IDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERESVSHRYCSLE 274 ID +T+ Q+ K + W+ +K++ ES++ C LE Sbjct: 654 IDDKTVIMCLWNDQQYEKLFYNCEWIFEKIQFHMESITLEDCLLE 698 >SPBC1703.13c |||inorganic phosphate transporter |Schizosaccharomyces pombe|chr 2|||Manual Length = 311 Score = 25.0 bits (52), Expect = 7.1 Identities = 8/19 (42%), Positives = 12/19 (63%) Frame = -1 Query: 182 PGPPSRTSRWYVCQYHHIC 126 P PP +T + Y QY+ +C Sbjct: 8 PAPPKKTLQLYTPQYYGLC 26 >SPAC1687.08 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||Manual Length = 96 Score = 24.6 bits (51), Expect = 9.4 Identities = 12/26 (46%), Positives = 14/26 (53%) Frame = -1 Query: 350 CDHVLDEISVSRSINDGNIVLASFEL 273 CDH+L IS SR G + FEL Sbjct: 23 CDHLLQYISNSRDSKAGLKIFLVFEL 48 Database: spombe Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 2,117,172 Number of Sequences: 5004 Number of extensions: 41802 Number of successful extensions: 155 Number of sequences better than 10.0: 23 Number of HSP's better than 10.0 without gapping: 136 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 154 length of database: 2,362,478 effective HSP length: 68 effective length of database: 2,022,206 effective search space used: 220420454 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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