Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120815.seq
         (543 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY524130-1|AAS17758.1|  211|Anopheles gambiae superoxide dismuta...    84   3e-18
AY745232-1|AAU93511.1|   75|Anopheles gambiae SOD3A protein.           55   1e-09
AY745233-1|AAU93512.1|  100|Anopheles gambiae SOD3B protein.           38   3e-04

>AY524130-1|AAS17758.1|  211|Anopheles gambiae superoxide dismutase
           2 protein.
          Length = 211

 Score = 83.8 bits (198), Expect = 3e-18
 Identities = 35/74 (47%), Positives = 46/74 (62%)
 Frame = +2

Query: 2   VHGKIYFQQESANRPLKISGYLLNLPRGLHGFHVHEYGDTSNGCTSAGEHFNPTNEDHGA 181
           V G +   Q S   P+ I   ++ L  G HGFH+HE GD ++GC S G H+NP    HGA
Sbjct: 33  VSGNVTISQPSCTEPVFIDINVVGLTPGKHGFHIHEKGDLTDGCASTGGHYNPDKVSHGA 92

Query: 182 PDAEIRHVGDLGXI 223
           P+ ++RHVGDLG I
Sbjct: 93  PNDQVRHVGDLGNI 106



 Score = 60.1 bits (139), Expect = 5e-11
 Identities = 26/51 (50%), Positives = 33/51 (64%)
 Frame = +1

Query: 265 DNVMSLYGPHNIIGXSXVVHTDKDDLGXTEHPXSKTTGNXDGRLGXGXIAI 417
           D V+SLYG  ++IG + V+H + DDLG T HP S  TGN  GR+  G I I
Sbjct: 120 DTVVSLYGARSVIGRAIVIHAEVDDLGKTNHPDSLKTGNAGGRVACGVIGI 170


>AY745232-1|AAU93511.1|   75|Anopheles gambiae SOD3A protein.
          Length = 75

 Score = 55.2 bits (127), Expect = 1e-09
 Identities = 25/50 (50%), Positives = 31/50 (62%)
 Frame = +1

Query: 274 MSLYGPHNIIGXSXVVHTDKDDLGXTEHPXSKTTGNXDGRLGXGXIAICK 423
           ++L G  N++G S VVH D DDLG   H  SKTTG+   RL  G I +CK
Sbjct: 25  IALSGALNVVGRSLVVHADPDDLGVGGHELSKTTGDAGARLACGVIGLCK 74


>AY745233-1|AAU93512.1|  100|Anopheles gambiae SOD3B protein.
          Length = 100

 Score = 37.5 bits (83), Expect = 3e-04
 Identities = 17/50 (34%), Positives = 27/50 (54%)
 Frame = +1

Query: 274 MSLYGPHNIIGXSXVVHTDKDDLGXTEHPXSKTTGNXDGRLGXGXIAICK 423
           ++L G  +IIG +  +   +DDLG  +H  SKTTGN    +    I + +
Sbjct: 41  LTLVGDRSIIGRTLSISEYEDDLGRGKHDYSKTTGNSGNCIACAIIGVAR 90



 Score = 36.3 bits (80), Expect = 7e-04
 Identities = 15/24 (62%), Positives = 16/24 (66%)
 Frame = +2

Query: 152 FNPTNEDHGAPDAEIRHVGDLGXI 223
           +NP   DHGAPD    HVGDLG I
Sbjct: 1   YNPDGNDHGAPDDANCHVGDLGNI 24


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 481,586
Number of Sequences: 2352
Number of extensions: 9859
Number of successful extensions: 17
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 50040333
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)