Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120812.seq
         (653 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript...    27   0.68 
AY146737-1|AAO12097.1|  119|Anopheles gambiae odorant-binding pr...    25   2.8  
DQ370037-1|ABD18598.1|  121|Anopheles gambiae putative TIL domai...    24   3.7  
AY299455-1|AAQ73620.1|  493|Anopheles gambiae FMRF amide recepto...    23   6.4  
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    23   6.4  

>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1049

 Score = 26.6 bits (56), Expect = 0.68
 Identities = 12/39 (30%), Positives = 22/39 (56%)
 Frame = -2

Query: 310 ICLRNNYNSVLKSCLVSHYRHLLLPQHLCQLAWLQLNGR 194
           I ++N +NS     + +    + +P HLC+L+   L+GR
Sbjct: 605 IDVKNAFNSASWEEIAAAVERMKIPPHLCRLSRNYLDGR 643


>AY146737-1|AAO12097.1|  119|Anopheles gambiae odorant-binding
           protein AgamOBP27 protein.
          Length = 119

 Score = 24.6 bits (51), Expect = 2.8
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = +1

Query: 253 DNVKRGNFSILNCSCFEGRFLK 318
           ++++ GNFS+ N  CF   F+K
Sbjct: 31  ESLRAGNFSVRNSLCFGECFVK 52


>DQ370037-1|ABD18598.1|  121|Anopheles gambiae putative TIL domain
           polypeptide protein.
          Length = 121

 Score = 24.2 bits (50), Expect = 3.7
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = +1

Query: 253 DNVKRGNFSILNCSCFEGRFLKNEFCR 333
           +N++RG+       C EG F +N + R
Sbjct: 78  ENIRRGDHLACTKHCVEGCFCRNGYVR 104


>AY299455-1|AAQ73620.1|  493|Anopheles gambiae FMRF amide receptor
           protein.
          Length = 493

 Score = 23.4 bits (48), Expect = 6.4
 Identities = 14/39 (35%), Positives = 19/39 (48%)
 Frame = -2

Query: 490 QSRKTKIRRACPALLDRWCT*SCRWPAPTPRYFYRARDT 374
           +S  TK+   C     R    S R P+P P  +Y AR+T
Sbjct: 418 RSTSTKLSN-CSMRTIRTTVRSTRAPSPGPIVYYPARET 455


>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
            protein.
          Length = 1645

 Score = 23.4 bits (48), Expect = 6.4
 Identities = 17/46 (36%), Positives = 21/46 (45%)
 Frame = -3

Query: 174  TPVSSCFTLKAAPLLLLYGTSCWSSPLSTLSRFGWLSSLLESPILR 37
            TP +S    K   LLL +GT   +SP S +S    L    ES   R
Sbjct: 1404 TPKTSLMDFKK--LLLAHGTKTHASPGSKMSAVEMLKKSKESAATR 1447


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 758,370
Number of Sequences: 2352
Number of extensions: 16815
Number of successful extensions: 48
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 48
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 64814025
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)