Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120812.seq
         (653 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC106708-1|AAI06709.1|  347|Homo sapiens purine-rich element bin...    33   1.2  
AY077841-1|AAL77218.1|  322|Homo sapiens Pur-gamma B-form protein.     33   1.2  
AF195513-1|AAF03900.1|  347|Homo sapiens Pur-gamma A-form protein.     33   1.2  
BC036884-1|AAH36884.1|  884|Homo sapiens ZNF462 protein protein.       31   3.6  
AL512593-2|CAI14942.1|  931|Homo sapiens zinc finger protein 462...    31   3.6  
AL512593-1|CAI14941.1| 1411|Homo sapiens zinc finger protein 462...    31   3.6  
AB058706-1|BAB47432.2| 1412|Homo sapiens KIAA1803 protein protein.     31   3.6  

>BC106708-1|AAI06709.1|  347|Homo sapiens purine-rich element
           binding protein G protein.
          Length = 347

 Score = 32.7 bits (71), Expect = 1.2
 Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
 Frame = -2

Query: 331 DKIRFSKICLRNNYNSVLKSCL---VSHYRHLLLPQHLCQLAWLQLNGRRRKIAHYA 170
           D IR SK+ L  +  + LK CL   + HY HL L  H  +    +  G RR+  H A
Sbjct: 98  DNIRKSKLTLSLSVAAELKDCLGDFIEHYAHLGLKGHRQEHGHSKEQGSRRRQKHSA 154


>AY077841-1|AAL77218.1|  322|Homo sapiens Pur-gamma B-form protein.
          Length = 322

 Score = 32.7 bits (71), Expect = 1.2
 Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
 Frame = -2

Query: 331 DKIRFSKICLRNNYNSVLKSCL---VSHYRHLLLPQHLCQLAWLQLNGRRRKIAHYA 170
           D IR SK+ L  +  + LK CL   + HY HL L  H  +    +  G RR+  H A
Sbjct: 98  DNIRKSKLTLSLSVAAELKDCLGDFIEHYAHLGLKGHRQEHGHSKEQGSRRRQKHSA 154


>AF195513-1|AAF03900.1|  347|Homo sapiens Pur-gamma A-form protein.
          Length = 347

 Score = 32.7 bits (71), Expect = 1.2
 Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
 Frame = -2

Query: 331 DKIRFSKICLRNNYNSVLKSCL---VSHYRHLLLPQHLCQLAWLQLNGRRRKIAHYA 170
           D IR SK+ L  +  + LK CL   + HY HL L  H  +    +  G RR+  H A
Sbjct: 98  DNIRKSKLTLSLSVAAELKDCLGDFIEHYAHLGLKGHRQEHGHSKEQGSRRRQKHSA 154


>BC036884-1|AAH36884.1|  884|Homo sapiens ZNF462 protein protein.
          Length = 884

 Score = 31.1 bits (67), Expect = 3.6
 Identities = 15/41 (36%), Positives = 25/41 (60%)
 Frame = +2

Query: 35  KRKIGDSSSDDNQPKRERVESGEDQQLVPYNNNNGAAFNVK 157
           K K+  SSSDD   + E     ED++L+ + +++GAA N +
Sbjct: 750 KEKMESSSSDDEDKEEEMNSKAEDRELMRF-SDHGAALNTE 789


>AL512593-2|CAI14942.1|  931|Homo sapiens zinc finger protein 462
           protein.
          Length = 931

 Score = 31.1 bits (67), Expect = 3.6
 Identities = 15/41 (36%), Positives = 25/41 (60%)
 Frame = +2

Query: 35  KRKIGDSSSDDNQPKRERVESGEDQQLVPYNNNNGAAFNVK 157
           K K+  SSSDD   + E     ED++L+ + +++GAA N +
Sbjct: 797 KEKMESSSSDDEDKEEEMNSKAEDRELMRF-SDHGAALNTE 836


>AL512593-1|CAI14941.1| 1411|Homo sapiens zinc finger protein 462
            protein.
          Length = 1411

 Score = 31.1 bits (67), Expect = 3.6
 Identities = 15/41 (36%), Positives = 25/41 (60%)
 Frame = +2

Query: 35   KRKIGDSSSDDNQPKRERVESGEDQQLVPYNNNNGAAFNVK 157
            K K+  SSSDD   + E     ED++L+ + +++GAA N +
Sbjct: 1277 KEKMESSSSDDEDKEEEMNSKAEDRELMRF-SDHGAALNTE 1316


>AB058706-1|BAB47432.2| 1412|Homo sapiens KIAA1803 protein protein.
          Length = 1412

 Score = 31.1 bits (67), Expect = 3.6
 Identities = 15/41 (36%), Positives = 25/41 (60%)
 Frame = +2

Query: 35   KRKIGDSSSDDNQPKRERVESGEDQQLVPYNNNNGAAFNVK 157
            K K+  SSSDD   + E     ED++L+ + +++GAA N +
Sbjct: 1278 KEKMESSSSDDEDKEEEMNSKAEDRELMRF-SDHGAALNTE 1317


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,363,289
Number of Sequences: 237096
Number of extensions: 2385941
Number of successful extensions: 5932
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 5657
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5929
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7310122300
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)