Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120812.seq
(653 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014296-2654|AAZ66062.1| 166|Drosophila melanogaster CG33687-P... 30 2.4
AY060753-1|AAL28301.1| 271|Drosophila melanogaster GH20409p pro... 30 3.2
AE014134-406|AAF51257.1| 271|Drosophila melanogaster CG3557-PA ... 30 3.2
U92536-1|AAD41441.1| 1487|Drosophila melanogaster RECQ helicase ... 28 9.6
AY060737-1|AAL28285.1| 319|Drosophila melanogaster GH18858p pro... 28 9.6
AL132651-2|CAB59576.1| 319|Drosophila melanogaster EG:103E12.2 ... 28 9.6
AF181653-1|AAD55438.1| 998|Drosophila melanogaster BcDNA.LD2363... 28 9.6
AE014298-768|AAF46056.1| 998|Drosophila melanogaster CG4119-PA ... 28 9.6
AE014298-150|AAF45581.1| 319|Drosophila melanogaster CG14629-PA... 28 9.6
AE014297-1368|AAF54691.1| 1487|Drosophila melanogaster CG6920-PA... 28 9.6
>AE014296-2654|AAZ66062.1| 166|Drosophila melanogaster CG33687-PA
protein.
Length = 166
Score = 30.3 bits (65), Expect = 2.4
Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Frame = +1
Query: 271 NFSILNCSCFEGRFLKNEFCRLANLNSLHEWED---KLYPEPDKNIVV 405
+F+ L C + F E CR+ +N H++ D KLY P NI++
Sbjct: 13 SFTNLKCEMIDRTFGNFEMCRIKAVNRTHKYIDINLKLYILPINNIMI 60
>AY060753-1|AAL28301.1| 271|Drosophila melanogaster GH20409p
protein.
Length = 271
Score = 29.9 bits (64), Expect = 3.2
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = +2
Query: 353 CTNGKTSCIPSPIKISWCWSRPTARLRTPSVQECRASP 466
C++G +S PS S C S+P+ P C ASP
Sbjct: 85 CSSGSSSAYPSSSAWSTCCSKPSTICCYPKPTRCCASP 122
>AE014134-406|AAF51257.1| 271|Drosophila melanogaster CG3557-PA
protein.
Length = 271
Score = 29.9 bits (64), Expect = 3.2
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = +2
Query: 353 CTNGKTSCIPSPIKISWCWSRPTARLRTPSVQECRASP 466
C++G +S PS S C S+P+ P C ASP
Sbjct: 85 CSSGSSSAYPSSSAWSTCCSKPSTICCYPKPTRCCASP 122
>U92536-1|AAD41441.1| 1487|Drosophila melanogaster RECQ helicase
homolog protein.
Length = 1487
Score = 28.3 bits (60), Expect = 9.6
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = -1
Query: 653 LSGNECTRLVPIFKGKSLCKCLCKMLPKYIVVFVN 549
L GN+C L+P GKSLC L +L + + + ++
Sbjct: 750 LLGNDCFVLMPTGGGKSLCYQLPAILTEGVTIVIS 784
>AY060737-1|AAL28285.1| 319|Drosophila melanogaster GH18858p
protein.
Length = 319
Score = 28.3 bits (60), Expect = 9.6
Identities = 18/55 (32%), Positives = 23/55 (41%)
Frame = +3
Query: 483 RLWNHKTCQSNFGQFFSIQYGDIHKHNNIFGQHFAKTLAKRFSFENGNQTCAFIA 647
RL KTC NF K +N Q A L + ++NG+Q FIA
Sbjct: 132 RLPQAKTCLKNFNDAILPCLTTDEKTHNAVLQRIADKLLEFICYKNGDQIALFIA 186
>AL132651-2|CAB59576.1| 319|Drosophila melanogaster EG:103E12.2
protein.
Length = 319
Score = 28.3 bits (60), Expect = 9.6
Identities = 18/55 (32%), Positives = 23/55 (41%)
Frame = +3
Query: 483 RLWNHKTCQSNFGQFFSIQYGDIHKHNNIFGQHFAKTLAKRFSFENGNQTCAFIA 647
RL KTC NF K +N Q A L + ++NG+Q FIA
Sbjct: 132 RLPQAKTCLKNFNDAILPCLTTDEKTHNAVLQRIADKLLEFICYKNGDQIALFIA 186
>AF181653-1|AAD55438.1| 998|Drosophila melanogaster BcDNA.LD23634
protein.
Length = 998
Score = 28.3 bits (60), Expect = 9.6
Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 3/64 (4%)
Frame = +2
Query: 2 GTRAHVGSMAT--KRKIGDSSSDDNQPKRERVESGEDQQLVPYNNN-NGAAFNVKHDETG 172
G+ + GS A+ K G SSS N + G+++ ++ + AA N+K DE G
Sbjct: 822 GSGSGSGSNASGGKNNGGGSSSSSNNKHNSNSKHGKNEAAASAGSSADAAAANIKKDENG 881
Query: 173 VMCY 184
Y
Sbjct: 882 AKVY 885
>AE014298-768|AAF46056.1| 998|Drosophila melanogaster CG4119-PA
protein.
Length = 998
Score = 28.3 bits (60), Expect = 9.6
Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 3/64 (4%)
Frame = +2
Query: 2 GTRAHVGSMAT--KRKIGDSSSDDNQPKRERVESGEDQQLVPYNNN-NGAAFNVKHDETG 172
G+ + GS A+ K G SSS N + G+++ ++ + AA N+K DE G
Sbjct: 822 GSGSGSGSNASGGKNNGGGSSSSSNNKHNSNSKHGKNEAAASAGSSADAAAANIKKDENG 881
Query: 173 VMCY 184
Y
Sbjct: 882 AKVY 885
>AE014298-150|AAF45581.1| 319|Drosophila melanogaster CG14629-PA
protein.
Length = 319
Score = 28.3 bits (60), Expect = 9.6
Identities = 18/55 (32%), Positives = 23/55 (41%)
Frame = +3
Query: 483 RLWNHKTCQSNFGQFFSIQYGDIHKHNNIFGQHFAKTLAKRFSFENGNQTCAFIA 647
RL KTC NF K +N Q A L + ++NG+Q FIA
Sbjct: 132 RLPQAKTCLKNFNDAILPCLTTDEKTHNAVLQRIADKLLEFICYKNGDQIALFIA 186
>AE014297-1368|AAF54691.1| 1487|Drosophila melanogaster CG6920-PA
protein.
Length = 1487
Score = 28.3 bits (60), Expect = 9.6
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = -1
Query: 653 LSGNECTRLVPIFKGKSLCKCLCKMLPKYIVVFVN 549
L GN+C L+P GKSLC L +L + + + ++
Sbjct: 750 LLGNDCFVLMPTGGGKSLCYQLPAILTEGVTIVIS 784
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,073,541
Number of Sequences: 53049
Number of extensions: 727749
Number of successful extensions: 2334
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2107
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2333
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2786177250
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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