Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120811.seq
         (652 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855503-1|ABH88190.1|  124|Tribolium castaneum chemosensory pro...    23   1.6  
DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory pro...    23   2.2  
DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    23   2.2  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    23   2.2  
DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    23   2.9  
DQ855502-1|ABH88189.1|  126|Tribolium castaneum chemosensory pro...    22   3.8  
DQ855495-1|ABH88182.1|  126|Tribolium castaneum chemosensory pro...    22   3.8  
DQ855499-1|ABH88186.1|  124|Tribolium castaneum chemosensory pro...    21   8.8  
AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    21   8.8  

>DQ855503-1|ABH88190.1|  124|Tribolium castaneum chemosensory
           protein 17 protein.
          Length = 124

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = +1

Query: 187 ARCPQTRPSGVETILSTLSSARPSW 261
           A+C +    GV  ++  L   +PSW
Sbjct: 72  AKCNEKHKEGVRKVIRHLIKNKPSW 96


>DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory
           protein 14 protein.
          Length = 126

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = +1

Query: 187 ARCPQTRPSGVETILSTLSSARPSW 261
           A+C +    GV  +L  L   +P+W
Sbjct: 73  AKCNEKHKEGVRKVLHHLIKNKPNW 97


>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 8/27 (29%), Positives = 16/27 (59%)
 Frame = +2

Query: 197 HRQDHRGWRRFFQHFLQRDRAGKHVPR 277
           +R++ +GW+   +H L  ++    VPR
Sbjct: 120 YRENKQGWQNSIRHNLSLNKCFVKVPR 146


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 9/27 (33%), Positives = 11/27 (40%)
 Frame = -3

Query: 464 QRACGFCPKPNLRFPFQWCSDHGHSCW 384
           Q  C +   PN       C+D   SCW
Sbjct: 15  QLECNWSSGPNATLQSSACTDDLSSCW 41


>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 14/30 (46%), Positives = 16/30 (53%)
 Frame = +2

Query: 389 NYARGHYTIGKEIVDLVLDRIRKLADQCTG 478
           +YAR     G  IVD+ LD  R L   CTG
Sbjct: 392 SYARAKGLGGIAIVDITLDDFRGL---CTG 418


>DQ855502-1|ABH88189.1|  126|Tribolium castaneum chemosensory
           protein 16 protein.
          Length = 126

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 7/25 (28%), Positives = 13/25 (52%)
 Frame = +1

Query: 187 ARCPQTRPSGVETILSTLSSARPSW 261
           A+C +    GV  ++  L   +P+W
Sbjct: 73  AKCNEKHKEGVRKVIHHLIENKPNW 97


>DQ855495-1|ABH88182.1|  126|Tribolium castaneum chemosensory
           protein 9 protein.
          Length = 126

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 7/25 (28%), Positives = 13/25 (52%)
 Frame = +1

Query: 187 ARCPQTRPSGVETILSTLSSARPSW 261
           A+C +    GV  ++  L   +P+W
Sbjct: 73  AKCNEKHKEGVRKVIHHLIENKPNW 97


>DQ855499-1|ABH88186.1|  124|Tribolium castaneum chemosensory
           protein 13 protein.
          Length = 124

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 6/25 (24%), Positives = 11/25 (44%)
 Frame = +1

Query: 187 ARCPQTRPSGVETILSTLSSARPSW 261
           A+C      G+  ++  L   +P W
Sbjct: 71  AKCNDKHKEGIRKVIHYLVKQKPEW 95


>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 9/33 (27%), Positives = 15/33 (45%)
 Frame = +2

Query: 548 SVSPLTTARSLNWSSPSTPRLRFSTAVVEPYNS 646
           S+   T  +  +W S S P L  + +    YN+
Sbjct: 223 SIDSFTLEQHRSWCSSSQPVLSTTNSTTNCYNN 255


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,791
Number of Sequences: 336
Number of extensions: 3618
Number of successful extensions: 12
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16760905
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)