Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120811.seq
(652 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_0994 + 23190344-23190456,23191367-23191581,23191663-231918... 177 8e-45
11_02_0058 + 7879859-7879951,7880844-7881078,7881165-7881535,788... 176 1e-44
03_05_0974 + 29324025-29324117,29325064-29325298,29325385-293257... 175 2e-44
03_02_0186 - 6243487-6243799,6243892-6244400,6244495-6244557,624... 157 5e-39
05_04_0306 + 20058640-20059159,20060406-20060819,20060921-200611... 105 4e-23
01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349 105 4e-23
06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379 104 5e-23
03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998 103 2e-22
03_01_0034 + 318432-318825,318902-319851 101 4e-22
02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467 101 4e-22
01_06_1060 + 34162161-34162554,34162613-34162675,34163262-341635... 95 6e-20
03_05_0575 + 25747813-25748206,25748567-25748614,25750296-257505... 87 1e-17
05_01_0412 - 3248405-3248458,3248533-3248637,3248950-3249078,324... 73 2e-13
10_08_0253 - 16196275-16196307,16196425-16196550,16196643-161967... 29 3.2
10_03_0016 - 7099862-7099967,7100059-7100357,7101862-7102171,710... 29 3.2
08_01_0312 + 2764744-2767390,2767632-2767990 29 4.2
12_02_0399 - 18600444-18600591,18600626-18601656 28 5.6
07_03_0483 - 18605176-18606118,18606353-18606482,18606609-18606738 28 5.6
11_01_0199 + 1563483-1563572,1563673-1563852,1564091-1564402,156... 27 9.8
07_03_1052 + 23598547-23600181 27 9.8
06_03_0020 + 15515768-15517696 27 9.8
05_06_0020 + 24976990-24977167,24978763-24978874,24979634-249797... 27 9.8
05_03_0060 - 7905455-7906216,7906723-7906887 27 9.8
04_03_0735 + 19141038-19143227 27 9.8
01_06_0317 + 28425408-28426079,28426286-28426351 27 9.8
>07_03_0994 +
23190344-23190456,23191367-23191581,23191663-23191862,
23192420-23192928,23193048-23193363
Length = 450
Score = 177 bits (430), Expect = 8e-45
Identities = 90/143 (62%), Positives = 106/143 (74%), Gaps = 2/143 (1%)
Frame = +2
Query: 230 FQHFLQRDRAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 409
F F AGKHVPRA+FVDLEPTV+DEVRTG+YRQLFHPEQLI+GKEDAANN+ARGHY
Sbjct: 49 FNTFFSETGAGKHVPRAIFVDLEPTVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHY 108
Query: 410 TIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSF--VEVPALGSLPY*WSVSPLTTARSLN 583
T+GKEIVDL LDR+RKLAD CTGLQGFL+F++ LGSL L
Sbjct: 109 TVGKEIVDLCLDRVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLG 168
Query: 584 WSSPSTPRLRFSTAVVEPYNSIL 652
++ +P++ STAVVEPYNS+L
Sbjct: 169 FTIYPSPQV--STAVVEPYNSVL 189
Score = 106 bits (255), Expect = 1e-23
Identities = 43/63 (68%), Positives = 51/63 (80%)
Frame = +3
Query: 87 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETELAS 266
MRE IS+H+GQAG+Q+GNACWELYCLEHGI+PDG MP+D T+G D+FNTFFSET
Sbjct: 1 MREIISIHIGQAGIQVGNACWELYCLEHGIEPDGTMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 267 TYP 275
P
Sbjct: 61 HVP 63
>11_02_0058 +
7879859-7879951,7880844-7881078,7881165-7881535,
7881648-7882304
Length = 451
Score = 176 bits (428), Expect = 1e-44
Identities = 92/143 (64%), Positives = 105/143 (73%), Gaps = 2/143 (1%)
Frame = +2
Query: 230 FQHFLQRDRAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 409
F F AGKHVPRAVFVDLEPTV+DEVRTG YRQLFHPEQLI+GKEDAANN+ARGHY
Sbjct: 49 FNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGDYRQLFHPEQLISGKEDAANNFARGHY 108
Query: 410 TIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSF--VEVPALGSLPY*WSVSPLTTARSLN 583
TIGKEIVDL LDRIRKLAD CTGLQGFL+F++ LGSL L
Sbjct: 109 TIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLG 168
Query: 584 WSSPSTPRLRFSTAVVEPYNSIL 652
++ +P++ ST+VVEPYNS+L
Sbjct: 169 FTVYPSPQV--STSVVEPYNSVL 189
Score = 124 bits (299), Expect = 6e-29
Identities = 50/63 (79%), Positives = 56/63 (88%)
Frame = +3
Query: 87 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETELAS 266
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMP DKT+GGGDD+FNTFFSET
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 267 TYP 275
P
Sbjct: 61 HVP 63
>03_05_0974 +
29324025-29324117,29325064-29325298,29325385-29325755,
29325864-29326520
Length = 451
Score = 175 bits (427), Expect = 2e-44
Identities = 92/143 (64%), Positives = 104/143 (72%), Gaps = 2/143 (1%)
Frame = +2
Query: 230 FQHFLQRDRAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 409
F F AGKHVPRAVFVDLEPTV+DEVRTG YRQLFHPEQLI GKEDAANN+ARGHY
Sbjct: 49 FNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGCYRQLFHPEQLINGKEDAANNFARGHY 108
Query: 410 TIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSF--VEVPALGSLPY*WSVSPLTTARSLN 583
TIGKEIVDL LDRIRKLAD CTGLQGFL+F++ LGSL L
Sbjct: 109 TIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLG 168
Query: 584 WSSPSTPRLRFSTAVVEPYNSIL 652
++ +P++ ST+VVEPYNS+L
Sbjct: 169 FTVYPSPQV--STSVVEPYNSVL 189
Score = 121 bits (291), Expect = 6e-28
Identities = 48/63 (76%), Positives = 56/63 (88%)
Frame = +3
Query: 87 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETELAS 266
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQ DGQMP+D+T+GGGDD+FNTFFSET
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQADGQMPSDRTVGGGDDAFNTFFSETGAGK 60
Query: 267 TYP 275
P
Sbjct: 61 HVP 63
>03_02_0186 -
6243487-6243799,6243892-6244400,6244495-6244557,
6245482-6245681,6246125-6246519,6246776-6246888
Length = 530
Score = 157 bits (382), Expect = 5e-39
Identities = 69/95 (72%), Positives = 82/95 (86%)
Frame = +2
Query: 221 RRFFQHFLQRDRAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYAR 400
R F F +GKHVPRA+FVDLEPTV+DEV+TG YRQLFHPEQLI+ KEDAANN+AR
Sbjct: 106 RDAFNTFFSETSSGKHVPRALFVDLEPTVIDEVKTGPYRQLFHPEQLISYKEDAANNFAR 165
Query: 401 GHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHS 505
GHYT+G+E+VDL LDR+RKLAD CTGLQGFL+F++
Sbjct: 166 GHYTVGREVVDLCLDRLRKLADNCTGLQGFLVFNA 200
Score = 81.4 bits (192), Expect = 6e-16
Identities = 31/39 (79%), Positives = 36/39 (92%)
Frame = +3
Query: 87 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTD 203
MRE IS+H+GQAG+Q+GN+CWELYCLEHGIQPDG MP D
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGLMPRD 39
Score = 62.9 bits (146), Expect = 2e-10
Identities = 28/36 (77%), Positives = 31/36 (86%)
Frame = +1
Query: 511 GGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVF 618
GGTGSG SLL+ERLSVDYG+KSKL F IYP+PQ F
Sbjct: 203 GGTGSGLGSLLLERLSVDYGRKSKLGFTIYPSPQYF 238
Score = 28.3 bits (60), Expect = 5.6
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +3
Query: 198 TDKTIGGGDDSFNTFFSETELASTYP 275
+D T G D+FNTFFSET P
Sbjct: 98 SDTTPGIARDAFNTFFSETSSGKHVP 123
>05_04_0306 +
20058640-20059159,20060406-20060819,20060921-20061190,
20062179-20062849
Length = 624
Score = 105 bits (251), Expect = 4e-23
Identities = 57/133 (42%), Positives = 78/133 (58%), Gaps = 2/133 (1%)
Frame = +2
Query: 260 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLV 439
G+ VPRAV +DLEP +D VRTG Y Q+F P+ + G+ A NN+A+GHYT G E++D V
Sbjct: 237 GRFVPRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSV 296
Query: 440 LDRIRKLADQCTGLQGFLIFHSF--VEVPALGSLPY*WSVSPLTTARSLNWSSPSTPRLR 613
LD +RK A+ C LQGF + HS +G+L L +S +P++
Sbjct: 297 LDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKV- 355
Query: 614 FSTAVVEPYNSIL 652
S VVEPYN+ L
Sbjct: 356 -SDTVVEPYNATL 367
Score = 48.8 bits (111), Expect = 4e-06
Identities = 21/41 (51%), Positives = 27/41 (65%)
Frame = +3
Query: 69 KKTQIKMRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQ 191
KK + KMRE + + GQ G QIG+ WE+ C EHGI P G+
Sbjct: 175 KKGEEKMREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGR 215
>01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349
Length = 447
Score = 105 bits (251), Expect = 4e-23
Identities = 57/133 (42%), Positives = 78/133 (58%), Gaps = 2/133 (1%)
Frame = +2
Query: 260 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLV 439
G+ VPRAV +DLEP +D VRTG Y Q+F P+ + G+ A NN+A+GHYT G E++D V
Sbjct: 57 GRFVPRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSV 116
Query: 440 LDRIRKLADQCTGLQGFLIFHSF--VEVPALGSLPY*WSVSPLTTARSLNWSSPSTPRLR 613
LD +RK A+ C LQGF + HS +G+L L +S +P++
Sbjct: 117 LDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKV- 175
Query: 614 FSTAVVEPYNSIL 652
S VVEPYN+ L
Sbjct: 176 -SDTVVEPYNATL 187
Score = 44.0 bits (99), Expect = 1e-04
Identities = 18/35 (51%), Positives = 23/35 (65%)
Frame = +3
Query: 87 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQ 191
MRE + + GQ G QIG+ WE+ C EHGI P G+
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGR 35
>06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379
Length = 446
Score = 104 bits (250), Expect = 5e-23
Identities = 56/133 (42%), Positives = 79/133 (59%), Gaps = 2/133 (1%)
Frame = +2
Query: 260 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLV 439
G++VPRAV +DLEP +D VR+G Y Q+F P+ + G+ A NN+A+GHYT G E++D V
Sbjct: 57 GRYVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSV 116
Query: 440 LDRIRKLADQCTGLQGFLIFHSF--VEVPALGSLPY*WSVSPLTTARSLNWSSPSTPRLR 613
LD +RK A+ C LQGF + HS +G+L L +S +P++
Sbjct: 117 LDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKV- 175
Query: 614 FSTAVVEPYNSIL 652
S VVEPYN+ L
Sbjct: 176 -SDTVVEPYNATL 187
Score = 40.3 bits (90), Expect = 0.001
Identities = 18/42 (42%), Positives = 23/42 (54%)
Frame = +3
Query: 87 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTI 212
MRE + + GQ G QIG WE+ C EHGI G+ D +
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDL 42
>03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998
Length = 444
Score = 103 bits (246), Expect = 2e-22
Identities = 55/133 (41%), Positives = 79/133 (59%), Gaps = 2/133 (1%)
Frame = +2
Query: 260 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLV 439
G++VPRAV +DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D V
Sbjct: 57 GRYVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSV 116
Query: 440 LDRIRKLADQCTGLQGFLIFHSF--VEVPALGSLPY*WSVSPLTTARSLNWSSPSTPRLR 613
LD +RK A+ C LQGF + HS +G+L L +S +P++
Sbjct: 117 LDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKV- 175
Query: 614 FSTAVVEPYNSIL 652
S VVEPYN+ L
Sbjct: 176 -SDTVVEPYNATL 187
Score = 40.3 bits (90), Expect = 0.001
Identities = 17/42 (40%), Positives = 23/42 (54%)
Frame = +3
Query: 87 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTI 212
MRE + + GQ G QIG WE+ C EHG+ G+ D +
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGVDATGRYAGDSDL 42
>03_01_0034 + 318432-318825,318902-319851
Length = 447
Score = 101 bits (243), Expect = 4e-22
Identities = 55/133 (41%), Positives = 77/133 (57%), Gaps = 2/133 (1%)
Frame = +2
Query: 260 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLV 439
G+ VPRAV +DLEP +D VR+G Y +F P+ + G+ A NN+A+GHYT G E++D V
Sbjct: 57 GRFVPRAVLMDLEPGTMDSVRSGPYGHIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAV 116
Query: 440 LDRIRKLADQCTGLQGFLIFHSF--VEVPALGSLPY*WSVSPLTTARSLNWSSPSTPRLR 613
LD +RK A+ C LQGF + HS +G+L L +S +P++
Sbjct: 117 LDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKV- 175
Query: 614 FSTAVVEPYNSIL 652
S VVEPYN+ L
Sbjct: 176 -SDTVVEPYNATL 187
Score = 42.3 bits (95), Expect = 3e-04
Identities = 21/63 (33%), Positives = 30/63 (47%)
Frame = +3
Query: 87 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETELAS 266
MRE + + GQ G QIG WE+ C EHGI G+ D + + N +++E
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDATGRYDGDSDL--QLERVNVYYNEASCGR 58
Query: 267 TYP 275
P
Sbjct: 59 FVP 61
>02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467
Length = 447
Score = 101 bits (243), Expect = 4e-22
Identities = 55/133 (41%), Positives = 78/133 (58%), Gaps = 2/133 (1%)
Frame = +2
Query: 260 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLV 439
G+ VPRAV +DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D V
Sbjct: 57 GRFVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSV 116
Query: 440 LDRIRKLADQCTGLQGFLIFHSF--VEVPALGSLPY*WSVSPLTTARSLNWSSPSTPRLR 613
LD +RK A+ C LQGF + HS +G+L L +S +P++
Sbjct: 117 LDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKV- 175
Query: 614 FSTAVVEPYNSIL 652
S VVEPYN+ L
Sbjct: 176 -SDTVVEPYNATL 187
Score = 40.3 bits (90), Expect = 0.001
Identities = 18/42 (42%), Positives = 23/42 (54%)
Frame = +3
Query: 87 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTI 212
MRE + + GQ G QIG WE+ C EHGI G+ D +
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDL 42
>01_06_1060 +
34162161-34162554,34162613-34162675,34163262-34163531,
34163944-34164623
Length = 468
Score = 94.7 bits (225), Expect = 6e-20
Identities = 41/76 (53%), Positives = 54/76 (71%)
Frame = +2
Query: 260 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLV 439
G+ VPRAV +DLEP +D VRTG Y Q+F P+ + G+ A NN+A+GHYT G E++D V
Sbjct: 57 GRFVPRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSV 116
Query: 440 LDRIRKLADQCTGLQG 487
LD +RK A+ C LQG
Sbjct: 117 LDVVRKEAENCDCLQG 132
Score = 42.7 bits (96), Expect = 2e-04
Identities = 18/35 (51%), Positives = 22/35 (62%)
Frame = +3
Query: 87 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQ 191
MRE + + GQ G QIG WE+ C EHGI P G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCDEHGIDPTGR 35
Score = 38.7 bits (86), Expect = 0.004
Identities = 15/37 (40%), Positives = 26/37 (70%)
Frame = +1
Query: 505 LRGGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQV 615
L GGTGSG +LL+ ++ +Y + L F+++P+P+V
Sbjct: 160 LGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKV 196
>03_05_0575 +
25747813-25748206,25748567-25748614,25750296-25750565,
25750658-25751334
Length = 462
Score = 87.0 bits (206), Expect = 1e-17
Identities = 37/75 (49%), Positives = 52/75 (69%)
Frame = +2
Query: 260 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLV 439
G+HVPRAV +DLEP +D +R+G +F P+ + G+ A NN+A+GHYT G E++D V
Sbjct: 57 GRHVPRAVLMDLEPGTMDSLRSGPIGGIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSV 116
Query: 440 LDRIRKLADQCTGLQ 484
LD +RK A+ C LQ
Sbjct: 117 LDVVRKEAENCDCLQ 131
Score = 41.9 bits (94), Expect = 4e-04
Identities = 17/34 (50%), Positives = 21/34 (61%)
Frame = +3
Query: 87 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDG 188
MRE + + GQ G QIG WE+ C EHG+ P G
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGVDPTG 34
Score = 38.7 bits (86), Expect = 0.004
Identities = 15/37 (40%), Positives = 26/37 (70%)
Frame = +1
Query: 505 LRGGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQV 615
L GGTGSG +LL+ ++ +Y + L F+++P+P+V
Sbjct: 155 LGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKV 191
>05_01_0412 -
3248405-3248458,3248533-3248637,3248950-3249078,
3249279-3249353,3249520-3249624,3249714-3249767,
3249970-3250370,3250583-3250694,3250886-3251086,
3251844-3251972
Length = 454
Score = 72.9 bits (171), Expect = 2e-13
Identities = 41/132 (31%), Positives = 74/132 (56%), Gaps = 3/132 (2%)
Frame = +2
Query: 266 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKE--DAANNYARGHYTIGKEIVDLV 439
++PRA+ VDLEP V++ ++ YR L++ E + + A NN+A G++ G+++VD +
Sbjct: 60 YIPRALLVDLEPRVINGIQNSEYRNLYNHENIFVAEHGGGAGNNWASGYHQ-GEQVVDDI 118
Query: 440 LDRIRKLADQCTGLQGFLIFHSFVEVPALGSLPY*W-SVSPLTTARSLNWSSPSTPRLRF 616
+D I + AD L+GF++ HS G Y +++ + + + S ++
Sbjct: 119 MDMIDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQTYSVFPNQMET 178
Query: 617 STAVVEPYNSIL 652
S VV+PYNS+L
Sbjct: 179 SDVVVQPYNSLL 190
Score = 48.8 bits (111), Expect = 4e-06
Identities = 25/56 (44%), Positives = 32/56 (57%)
Frame = +3
Query: 90 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETE 257
RE I++ VGQ G QIG W+ CLEHGI DG + T GG D + FF + +
Sbjct: 3 REIITIQVGQCGNQIGMEFWKQLCLEHGIGKDGLLEDFATQGG--DRKDVFFYQAD 56
>10_08_0253 -
16196275-16196307,16196425-16196550,16196643-16196741,
16196822-16197001,16197090-16197371,16197471-16199141,
16199257-16199463,16199566-16199700,16199792-16200082,
16200403-16200621,16200876-16201034,16201120-16201181,
16201257-16201383,16201460-16201693,16201777-16202003,
16202163-16202257,16202341-16202468,16202574-16202594,
16202765-16202921,16203007-16203075,16203228-16203341,
16203415-16203491,16203576-16203688,16204432-16204507,
16204592-16204756,16204825-16204952,16205049-16205130,
16205426-16205548,16205633-16205860,16205933-16206034,
16206144-16206341,16206581-16206760,16206868-16207020,
16207690-16207797,16208201-16208355,16208786-16208912,
16209825-16209914,16209986-16210127,16210303-16210379,
16210467-16210582,16210638-16210773,16211130-16211198,
16211279-16211361,16211655-16211720,16211788-16211974,
16212054-16213547,16213635-16214165,16214234-16214363,
16214407-16215878,16216359-16216364,16216750-16217055,
16217364-16217468,16217577-16217772,16217862-16217929,
16218853-16220631,16221026-16221151,16221604-16221780,
16221997-16222128,16223461-16223498,16223710-16223788,
16224175-16224284,16224787-16224935,16225027-16225197,
16225281-16225552,16226355-16226442,16227942-16228369
Length = 5157
Score = 29.1 bits (62), Expect = 3.2
Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +1
Query: 148 GSFTAWSTASSLMARCPQTRPS-GVETILSTLSSARPS 258
GSF+A + A+ L+ARCP R V + ST PS
Sbjct: 5 GSFSAAAAAARLLARCPALRADPRVLALASTAGGGGPS 42
>10_03_0016 -
7099862-7099967,7100059-7100357,7101862-7102171,
7104402-7105054,7105266-7105554,7106549-7106634
Length = 580
Score = 29.1 bits (62), Expect = 3.2
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +1
Query: 343 VSSRTTYYW*GRCGQQLCPWSLHHWK 420
VS+RTTY +C Q CPW +H +K
Sbjct: 239 VSNRTTYKV--KCTQAGCPWRVHGYK 262
>08_01_0312 + 2764744-2767390,2767632-2767990
Length = 1001
Score = 28.7 bits (61), Expect = 4.2
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = +1
Query: 187 ARCPQTRPSGVETILSTLSSARP 255
+RCPQ RPS + +LS L ARP
Sbjct: 969 SRCPQERPS-MREVLSMLQEARP 990
>12_02_0399 - 18600444-18600591,18600626-18601656
Length = 392
Score = 28.3 bits (60), Expect = 5.6
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +1
Query: 343 VSSRTTYYW*GRCGQQLCPWSLHHWK 420
+S+RTTY +C Q CPW +H +K
Sbjct: 240 ISNRTTYDV--KCTQAGCPWRVHGYK 263
>07_03_0483 - 18605176-18606118,18606353-18606482,18606609-18606738
Length = 400
Score = 28.3 bits (60), Expect = 5.6
Identities = 8/15 (53%), Positives = 12/15 (80%)
Frame = -3
Query: 416 QWCSDHGHSCWPHLP 372
++ S+HGHSCW +P
Sbjct: 26 RYISEHGHSCWSSVP 40
>11_01_0199 +
1563483-1563572,1563673-1563852,1564091-1564402,
1564753-1564800,1565205-1565438,1565632-1566219
Length = 483
Score = 27.5 bits (58), Expect = 9.8
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +2
Query: 563 TTARSLNWSSPSTPRLRFSTA 625
+T S+ WSS TPR+RF A
Sbjct: 122 STTPSMEWSSGRTPRMRFRRA 142
>07_03_1052 + 23598547-23600181
Length = 544
Score = 27.5 bits (58), Expect = 9.8
Identities = 22/63 (34%), Positives = 27/63 (42%)
Frame = +2
Query: 350 PEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFVEVPALG 529
P ITG +D+ + YARG G E+V L I L I S VE LG
Sbjct: 310 PTVRITGIDDSVSAYARGG---GLELVGRRLSHIASLCKVPFEFHPLAISGSKVEAAHLG 366
Query: 530 SLP 538
+P
Sbjct: 367 VIP 369
>06_03_0020 + 15515768-15517696
Length = 642
Score = 27.5 bits (58), Expect = 9.8
Identities = 14/41 (34%), Positives = 19/41 (46%), Gaps = 3/41 (7%)
Frame = +3
Query: 159 CLEHGIQPDGQMPTDKTIGGGD---DSFNTFFSETELASTY 272
C+ HG DG++ GGGD S ++ F L S Y
Sbjct: 77 CVRHGTPSDGRLIHRHVFGGGDVAAPSCSSLFVSNSLVSLY 117
>05_06_0020 + 24976990-24977167,24978763-24978874,24979634-24979722,
24979801-24979869,24979953-24980082,24980506-24980664,
24980767-24981127,24981343-24981452,24981753-24981909,
24983336-24983748,24983828-24984020,24984384-24986198
Length = 1261
Score = 27.5 bits (58), Expect = 9.8
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = -1
Query: 637 GLDDGSGKPEARGRWR 590
GL+ G GKPEAR W+
Sbjct: 1015 GLESGLGKPEARDSWQ 1030
>05_03_0060 - 7905455-7906216,7906723-7906887
Length = 308
Score = 27.5 bits (58), Expect = 9.8
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = +1
Query: 175 SSLMARCPQTRPSGVETILSTLSSARPSW 261
++L CP P V + LS A PSW
Sbjct: 205 AALRLACPAAAPRAVAAAVPVLSDATPSW 233
>04_03_0735 + 19141038-19143227
Length = 729
Score = 27.5 bits (58), Expect = 9.8
Identities = 14/58 (24%), Positives = 29/58 (50%)
Frame = +1
Query: 91 VSASLYTLAKPESRSVMPAGSFTAWSTASSLMARCPQTRPSGVETILSTLSSARPSWQ 264
V+ +YT K ++ + A + A++ A TRP+GV+T ++ + R ++
Sbjct: 134 VTNGMYTYDKKANKRARKNAAAAAAAAAAAAAAAEATTRPAGVDTFWTSCNRCRMQYE 191
>01_06_0317 + 28425408-28426079,28426286-28426351
Length = 245
Score = 27.5 bits (58), Expect = 9.8
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +1
Query: 466 PVYRSARIPDLPLLRGGTGSG 528
P RS R+P LP + GG G G
Sbjct: 24 PTPRSHRVPSLPAVSGGGGGG 44
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,332,394
Number of Sequences: 37544
Number of extensions: 453846
Number of successful extensions: 1531
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1434
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1508
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1620349964
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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