Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120810.seq
         (656 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC063480-1|AAH63480.1|  433|Homo sapiens CASC4 protein protein.        31   2.7  
BC012124-1|AAH12124.1|  177|Homo sapiens CASC4 protein protein.        31   2.7  
AY358086-1|AAQ88453.1|  380|Homo sapiens VGFG2573 protein.             31   2.7  
L22075-1|AAA74235.1|  377|Homo sapiens guanine nucleotide regula...    31   3.6  
BC036756-1|AAH36756.1|  377|Homo sapiens guanine nucleotide bind...    31   3.6  
AF493902-1|AAM12616.1|  377|Homo sapiens guanine nucleotide bind...    31   3.6  

>BC063480-1|AAH63480.1|  433|Homo sapiens CASC4 protein protein.
          Length = 433

 Score = 31.5 bits (68), Expect = 2.7
 Identities = 22/71 (30%), Positives = 35/71 (49%)
 Frame = +3

Query: 171 QRDDGRAQSKRAAPRGVGNR*RCYFDQINTLLSEITDSLPDLTLMLDKLAEQLLEAINXM 350
           + D GR  S+  A  G+G R  C  D++  L + I+  + D+  + ++LAE   E +   
Sbjct: 85  EADYGRLSSRLQAREGLGKR--CEDDKVK-LQNNISYQMADIHHLKEQLAELRQEFLRQE 141

Query: 351 QQTQRNELNNT 383
            Q Q    NNT
Sbjct: 142 DQLQDYRKNNT 152


>BC012124-1|AAH12124.1|  177|Homo sapiens CASC4 protein protein.
          Length = 177

 Score = 31.5 bits (68), Expect = 2.7
 Identities = 22/71 (30%), Positives = 35/71 (49%)
 Frame = +3

Query: 171 QRDDGRAQSKRAAPRGVGNR*RCYFDQINTLLSEITDSLPDLTLMLDKLAEQLLEAINXM 350
           + D GR  S+  A  G+G R  C  D++  L + I+  + D+  + ++LAE   E +   
Sbjct: 85  EADYGRLSSRLQAREGLGKR--CEDDKVK-LQNNISYQMADIHHLKEQLAELRQEFLRQE 141

Query: 351 QQTQRNELNNT 383
            Q Q    NNT
Sbjct: 142 DQLQDYRKNNT 152


>AY358086-1|AAQ88453.1|  380|Homo sapiens VGFG2573 protein.
          Length = 380

 Score = 31.5 bits (68), Expect = 2.7
 Identities = 22/71 (30%), Positives = 35/71 (49%)
 Frame = +3

Query: 171 QRDDGRAQSKRAAPRGVGNR*RCYFDQINTLLSEITDSLPDLTLMLDKLAEQLLEAINXM 350
           + D GR  S+  A  G+G R  C  D++  L + I+  + D+  + ++LAE   E +   
Sbjct: 85  EADYGRLSSRLQAREGLGKR--CEDDKVK-LQNNISYQMADIHHLKEQLAELRQEFLRQE 141

Query: 351 QQTQRNELNNT 383
            Q Q    NNT
Sbjct: 142 DQLQDYRKNNT 152


>L22075-1|AAA74235.1|  377|Homo sapiens guanine nucleotide
           regulatory protein protein.
          Length = 377

 Score = 31.1 bits (67), Expect = 3.6
 Identities = 15/51 (29%), Positives = 28/51 (54%)
 Frame = +3

Query: 243 FDQINTLLSEITDSLPDLTLMLDKLAEQLLEAINXMQQTQRNELNNTNSIL 395
           FD + ++L  ++ S  D  LM D+L  +L E++N  +    N + +  SI+
Sbjct: 237 FDSVTSILFLVSSSEFDQVLMEDRLTNRLTESLNIFETIVNNRVFSNVSII 287


>BC036756-1|AAH36756.1|  377|Homo sapiens guanine nucleotide binding
           protein (G protein), alpha 13 protein.
          Length = 377

 Score = 31.1 bits (67), Expect = 3.6
 Identities = 15/51 (29%), Positives = 28/51 (54%)
 Frame = +3

Query: 243 FDQINTLLSEITDSLPDLTLMLDKLAEQLLEAINXMQQTQRNELNNTNSIL 395
           FD + ++L  ++ S  D  LM D+L  +L E++N  +    N + +  SI+
Sbjct: 237 FDSVTSILFLVSSSEFDQVLMEDRLTNRLTESLNIFETIVNNRVFSNVSII 287


>AF493902-1|AAM12616.1|  377|Homo sapiens guanine nucleotide binding
           protein alpha 13 protein.
          Length = 377

 Score = 31.1 bits (67), Expect = 3.6
 Identities = 15/51 (29%), Positives = 28/51 (54%)
 Frame = +3

Query: 243 FDQINTLLSEITDSLPDLTLMLDKLAEQLLEAINXMQQTQRNELNNTNSIL 395
           FD + ++L  ++ S  D  LM D+L  +L E++N  +    N + +  SI+
Sbjct: 237 FDSVTSILFLVSSSEFDQVLMEDRLTNRLTESLNIFETIVNNRVFSNVSII 287


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,582,692
Number of Sequences: 237096
Number of extensions: 1270299
Number of successful extensions: 2388
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2330
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2388
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7366354010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)