Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120809.seq
         (649 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    23   2.9  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    23   2.9  
AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    22   3.8  
AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    22   5.0  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   5.0  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    22   5.0  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    22   5.0  
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    21   6.6  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    21   8.7  

>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = -1

Query: 466 GSSIPLLSPNTELRSFEPAPQSV 398
           G  +  LS   ELR FEPA  +V
Sbjct: 427 GELLHALSDKPELRPFEPAVTAV 449


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -2

Query: 120 CRRVNHSKQCN**CNHYDYT 61
           C+R+ + KQC   C   DY+
Sbjct: 788 CKRIYNEKQCCKNCARVDYS 807


>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = -2

Query: 507 RDLNIAYLASSCSKVRPFRFYHQ 439
           +D+N  YL  S S  RP   Y Q
Sbjct: 18  KDMNARYLPPSLSDTRPMLPYPQ 40


>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 15/54 (27%), Positives = 25/54 (46%)
 Frame = -2

Query: 597 QFDLVINTSK*LGSCMAVGQK*TFIR*TGCRDLNIAYLASSCSKVRPFRFYHQT 436
           +FD+++N SK L   +        I   GC  L + +L +  + +  F  YH T
Sbjct: 109 RFDILLNKSKNLQFPLL--STLIIIISLGCLILAVVFLLTLSALLEGFTLYHTT 160


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 7/18 (38%), Positives = 14/18 (77%)
 Frame = +1

Query: 403 FAVPVQTIAILCLVIKAE 456
           F +  QTI I+C+++++E
Sbjct: 608 FLLITQTIFIICVIVQSE 625


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 15/54 (27%), Positives = 25/54 (46%)
 Frame = -2

Query: 597 QFDLVINTSK*LGSCMAVGQK*TFIR*TGCRDLNIAYLASSCSKVRPFRFYHQT 436
           +FD+++N SK L   +        I   GC  L + +L +  + +  F  YH T
Sbjct: 109 RFDILLNKSKNLQFPLL--STLIIIISLGCLILAVVFLLTLSALLEGFTLYHTT 160


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 15/54 (27%), Positives = 25/54 (46%)
 Frame = -2

Query: 597 QFDLVINTSK*LGSCMAVGQK*TFIR*TGCRDLNIAYLASSCSKVRPFRFYHQT 436
           +FD+++N SK L   +        I   GC  L + +L +  + +  F  YH T
Sbjct: 109 RFDILLNKSKNLQFPLL--STLIIIISLGCLILAVVFLLTLSALLEGFTLYHTT 160


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = +3

Query: 360 DDFDLIKQRVVPHTLCGAGSN 422
           DD  L+K     H+ C  GSN
Sbjct: 23  DDVLLVKSEPQLHSPCATGSN 43


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -2

Query: 441 QTQNCDRLNRHRKV 400
           +  NCD+L + RKV
Sbjct: 85  KVNNCDKLEKPRKV 98


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,458
Number of Sequences: 336
Number of extensions: 3514
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16656800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)