Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120808.seq
         (631 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    26   1.1  
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    25   2.6  
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript...    24   3.5  
AY579078-1|AAT81602.1|  425|Anopheles gambiae neuropeptide F rec...    24   4.6  

>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 25.8 bits (54), Expect = 1.1
 Identities = 15/55 (27%), Positives = 25/55 (45%)
 Frame = +2

Query: 449 PTQIWAEANRFAHLFANEMIWLDATLKRVXQDLEKRAPRKRRNLGQTALAGHLPP 613
           PT + A A  ++H  A+ M    +++  +   L         N    +LAGH+PP
Sbjct: 633 PTSLAAAAAAYSHSIASTMSSYHSSMAHIG-GLNLSHTAALANAQNLSLAGHIPP 686


>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
           polyprotein protein.
          Length = 1726

 Score = 24.6 bits (51), Expect = 2.6
 Identities = 15/63 (23%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
 Frame = +2

Query: 116 IVNGQYVSTSTASTNRRLSM-PT--KSSTMLQIAWQSRATRCICTXTQCYYQIWRDSTDN 286
           + +G   +++  S N  L + PT  + +T + + W+ RA   +    + Y Q+W    D 
Sbjct: 748 VFDGSCKTSNGRSLNDILKVGPTIQQDTTDILLRWRRRAIAVVGDVEKMYRQVWVHEEDR 807

Query: 287 EVQ 295
           + Q
Sbjct: 808 KFQ 810


>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1154

 Score = 24.2 bits (50), Expect = 3.5
 Identities = 13/24 (54%), Positives = 15/24 (62%)
 Frame = -3

Query: 551 FPNLAEPVSASRRAKSFRWQTNER 480
           F  +   V A RRAKSFR +TN R
Sbjct: 551 FSAIQRVVDAGRRAKSFR-RTNHR 573


>AY579078-1|AAT81602.1|  425|Anopheles gambiae neuropeptide F
           receptor protein.
          Length = 425

 Score = 23.8 bits (49), Expect = 4.6
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = +1

Query: 523 AETGSARFGKTRAAKTAQLG 582
           A  G+A  G+TRAA+TA  G
Sbjct: 365 ANGGAATVGRTRAARTATDG 384


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 694,429
Number of Sequences: 2352
Number of extensions: 15052
Number of successful extensions: 16
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 61468785
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)