Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120808.seq
         (631 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK074060-1|BAB84886.1|  173|Homo sapiens FLJ00131 protein protein.     32   1.5  
BC012367-1|AAH12367.1|  176|Homo sapiens mal, T-cell differentia...    30   7.8  
AY007723-1|AAG15576.1|  176|Homo sapiens MAL2 proteolipid protein.     30   7.8  
AL121747-11|CAO03633.1|  340|Homo sapiens RanBP-type and C3HC4-t...    30   7.8  
AK172820-1|BAD18789.1|  220|Homo sapiens protein ( Homo sapiens ...    30   7.8  

>AK074060-1|BAB84886.1|  173|Homo sapiens FLJ00131 protein protein.
          Length = 173

 Score = 32.3 bits (70), Expect = 1.5
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = -3

Query: 233 YSGSPCFATLSGAWCWIWSACS 168
           YS S CFA++SG WC +   CS
Sbjct: 2   YSRSCCFASVSGGWCLVKGDCS 23


>BC012367-1|AAH12367.1|  176|Homo sapiens mal, T-cell
           differentiation protein 2 protein.
          Length = 176

 Score = 29.9 bits (64), Expect = 7.8
 Identities = 18/51 (35%), Positives = 22/51 (43%), Gaps = 1/51 (1%)
 Frame = -3

Query: 233 YSGS-PCFATLSGAWCWIWSACSNVDLYLPSTWTRIARSQFTYFXLLAMSL 84
           YSG+  C   L G   WI  A SNV L L   W         +F LL + +
Sbjct: 35  YSGAFVCLEILFGGLVWILVASSNVPLPLLQGWVMFVSVTAFFFSLLFLGM 85


>AY007723-1|AAG15576.1|  176|Homo sapiens MAL2 proteolipid protein.
          Length = 176

 Score = 29.9 bits (64), Expect = 7.8
 Identities = 18/51 (35%), Positives = 22/51 (43%), Gaps = 1/51 (1%)
 Frame = -3

Query: 233 YSGS-PCFATLSGAWCWIWSACSNVDLYLPSTWTRIARSQFTYFXLLAMSL 84
           YSG+  C   L G   WI  A SNV L L   W         +F LL + +
Sbjct: 35  YSGAFVCLEILFGGLVWILVASSNVPLPLLQGWVMFVSVTAFFFSLLFLGM 85


>AL121747-11|CAO03633.1|  340|Homo sapiens RanBP-type and C3HC4-type
           zinc finger containing 1 protein.
          Length = 340

 Score = 29.9 bits (64), Expect = 7.8
 Identities = 18/73 (24%), Positives = 30/73 (41%), Gaps = 2/73 (2%)
 Frame = +2

Query: 80  WPRTSPAVXNM*IVNGQYVSTSTASTNRRLSMP--TKSSTMLQIAWQSRATRCICTXTQC 253
           W  ++P   +     G  V  +     R    P  T  +   + AW++R  RC+ T  +C
Sbjct: 79  WAGSAPGAPSSTSPRGLAVRCAAGRAPRPTRSPPHTSPTRRSERAWRARRRRCVSTSREC 138

Query: 254 YYQIWRDSTDNEV 292
                R+S + EV
Sbjct: 139 LQGTIRNSQEAEV 151


>AK172820-1|BAD18789.1|  220|Homo sapiens protein ( Homo sapiens
           cDNA FLJ23981 fis, clone HEP20958. ).
          Length = 220

 Score = 29.9 bits (64), Expect = 7.8
 Identities = 18/51 (35%), Positives = 22/51 (43%), Gaps = 1/51 (1%)
 Frame = -3

Query: 233 YSGS-PCFATLSGAWCWIWSACSNVDLYLPSTWTRIARSQFTYFXLLAMSL 84
           YSG+  C   L G   WI  A SNV L L   W         +F LL + +
Sbjct: 35  YSGAFVCLEILFGGLVWILVASSNVPLPLLQGWVMFVSVTAFFFSLLFLGM 85


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,634,451
Number of Sequences: 237096
Number of extensions: 2040851
Number of successful extensions: 4143
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3935
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4143
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6860268620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)